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Sed0010525 (gene) of Chayote v1 genome

Gene IDSed0010525
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich protein A3
Genome locationLG12:1574218..1576285
RNA-Seq ExpressionSed0010525
SyntenySed0010525
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028684.1 hypothetical protein SDJN02_09865 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-4668.21Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP---YGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYG
        M GGKD  T D+G+ SHMAAFAAG +HY RPHGYPPPPP    GY  P GYPPAGYPPP GYPPAG          YPY GG P AGY  HHHY      
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP---YGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYG

Query:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK
               GHGHG+GHGMGGLLAGGAAAAAA YGAHH+VHA PFG+G +G+FKHGKFGK WKHGGKFMKFKKWK
Subjt:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK

XP_004133933.1 glycine-rich protein A3 [Cucumis sativus]1.4e-4971.02Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYG--YPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH
        M GGK+N  +DKG+FS+MAAFAAG HHYP  HGYPPPP  G  YPPPGGYPP GY PP GYP    P+GGHPHTAYP PGGYP AGY   HHY GY    
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYG--YPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH

Query:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK
              GHG+G+GHG+GGLLAGGAAAAAA YGAHHL HARPFGFGH    HGKFKHGKFGK WKHGG  M+FKKWK
Subjt:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK

XP_008438206.1 PREDICTED: glycine-rich protein A3 [Cucumis melo]2.6e-5172.67Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPP--PYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH
        M GGK+N  +DKG+FS+MAAFAAG HHYP  HGYPPPP    GYPPPGGYPPAGY PP GYP    P+GGHPHTAYPY GGYP AGY   HHY GY    
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPP--PYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH

Query:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK
                GHG+GHG+GGLLAGGAAAAAA YGAHHL HARPFGFG HGKFKHGKFGK WKHGGKF +FKKWK
Subjt:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK

XP_022147022.1 glycine-rich protein A3 [Momordica charantia]4.8e-5369.27Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP----YGYPPPGGYPPAGYPPPCGYPPAGY-PHGGHPHTAYPYPGGYPHAGYSSHHHYSGYG
        M GGK+  + ++G+FSH+ AFAAG HHYP  HGYPPPPP     GYPPPGGYPPAGYPPP GYPPAGY PHGGHP +AYPYPGGYP AGY   HH+    
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP----YGYPPPGGYPPAGYPPPCGYPPAGY-PHGGHPHTAYPYPGGYPHAGYSSHHHYSGYG

Query:  YGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK
                     G+GHGMG +LAGGAAAAAA YGAHHLVHARPFGFGH    HGKFKHGKFGK WKHGGKFMKFK+WK
Subjt:  YGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK

XP_022974188.1 glycine-rich protein A3-like isoform X1 [Cucurbita maxima]2.7e-4869.36Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP---YGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYG
        M GGKD  T D+G+ SHMAAFAAG +HY RPHGYPPPPP    GY PP GYPPAGYPPP GYPPAG          YPY GGYP AGY  HHHY      
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP---YGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYG

Query:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK
               GHGHG+GHGMGGLLAGGAAAAAA YGAHH+VHA PFG+G +G+FKHGKFGK WKHGGKFMKFKKWK
Subjt:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK

TrEMBL top hitse value%identityAlignment
A0A0A0L4F2 Uncharacterized protein7.0e-5071.02Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYG--YPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH
        M GGK+N  +DKG+FS+MAAFAAG HHYP  HGYPPPP  G  YPPPGGYPP GY PP GYP    P+GGHPHTAYP PGGYP AGY   HHY GY    
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYG--YPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH

Query:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK
              GHG+G+GHG+GGLLAGGAAAAAA YGAHHL HARPFGFGH    HGKFKHGKFGK WKHGG  M+FKKWK
Subjt:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK

A0A1S3AWG9 glycine-rich protein A31.3e-5172.67Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPP--PYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH
        M GGK+N  +DKG+FS+MAAFAAG HHYP  HGYPPPP    GYPPPGGYPPAGY PP GYP    P+GGHPHTAYPY GGYP AGY   HHY GY    
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPP--PYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGH

Query:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK
                GHG+GHG+GGLLAGGAAAAAA YGAHHL HARPFGFG HGKFKHGKFGK WKHGGKF +FKKWK
Subjt:  GHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK

A0A6J1D180 glycine-rich protein A32.3e-5369.27Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP----YGYPPPGGYPPAGYPPPCGYPPAGY-PHGGHPHTAYPYPGGYPHAGYSSHHHYSGYG
        M GGK+  + ++G+FSH+ AFAAG HHYP  HGYPPPPP     GYPPPGGYPPAGYPPP GYPPAGY PHGGHP +AYPYPGGYP AGY   HH+    
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP----YGYPPPGGYPPAGYPPPCGYPPAGY-PHGGHPHTAYPYPGGYPHAGYSSHHHYSGYG

Query:  YGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK
                     G+GHGMG +LAGGAAAAAA YGAHHLVHARPFGFGH    HGKFKHGKFGK WKHGGKFMKFK+WK
Subjt:  YGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGH----HGKFKHGKFGKGWKHGGKFMKFKKWK

A0A6J1IGV8 glycine-rich protein A3-like isoform X11.3e-4869.36Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP---YGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYG
        M GGKD  T D+G+ SHMAAFAAG +HY RPHGYPPPPP    GY PP GYPPAGYPPP GYPPAG          YPY GGYP AGY  HHHY      
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPP---YGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYG

Query:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK
               GHGHG+GHGMGGLLAGGAAAAAA YGAHH+VHA PFG+G +G+FKHGKFGK WKHGGKFMKFKKWK
Subjt:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK

A0A6J1IZ97 glycine-rich protein A3-like4.7e-4672.41Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPY---GYPPPGGYPPAGYPPPCGYPPAGY-PHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGY
        M GGK+  ++DKG+FS MA+FAAG  HY  PHGYPPPPPY   GYPPPGGYPPAGYPPP GYPPA Y P GG+P  AYP PGGYP AGY  H  Y   GY
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPY---GYPPPGGYPPAGYPPPCGYPPAGY-PHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGY

Query:  GHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK
           H Y  GHG G+G GMGGLLAGGAAAAAA YGAHHL HARPFGFG HGKFKHGKFGK WKHGG   KFKKWK
Subjt:  GHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK

SwissProt top hitse value%identityAlignment
P37705 Glycine-rich protein A32.0e-1446.25Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPP----PPYGYPPP-GGYPPAGYPPP-CGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGY
        M GG  +  QDKG+FS++A   AG  HYP P  YPP     PP GYPP  GGYPP GYPP   GYPP GYP  G         GGYP  GY    H+SG 
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPP----PPYGYPPP-GGYPPAGYPPP-CGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGY

Query:  GYGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFG
           H  G+G         G+ G++AGG AAAAA YG HH+        G HG + HG  G
Subjt:  GYGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFG

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH24.3e-0459.62Show/hide
Query:  PPYGYPPPGGYPPAGYP----PPCGYPPAGYPHGGHPHTAYPYPGGYPHAGY
        PP G PPP GYPP GYP    PP GYPP GYP  G+P   YP   GYP  GY
Subjt:  PPYGYPPPGGYPPAGYP----PPCGYPPAGYPHGGHPHTAYPYPGGYPHAGY

Arabidopsis top hitse value%identityAlignment
AT1G31750.1 proline-rich family protein5.9e-1746.39Show/hide
Query:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGY-PPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGHGHG
        G  D++ QDK  FSH        H YP P  YPPPP   YPPPGGYPP GY PPP GYPPA YP         P PG YP AGY                
Subjt:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGY-PPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGHGHG

Query:  YGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFK
           G   G+G G+GGL+AG A AAAA  G HH  H    G+GHHG   HGK+ +G+  GGK+ + K
Subjt:  YGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFK

AT4G19200.1 proline-rich family protein3.7e-1943.84Show/hide
Query:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCGYPPAGYP--HGGHPHTAYPYPGGYPHAGY-SSHHHYSGYGYG
        M GGKD +  ++    H   F  G H+ P   GY   PP GYPP  GYPPAG  PP GYPP  YP   GG+P    P PGGYP AGY +   H+SG+   
Subjt:  MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCGYPPAGYP--HGGHPHTAYPYPGGYPHAGY-SSHHHYSGYGYG

Query:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHA--RPF---------------GFGH--HGKFKHGKFGKGWKHG-----------GKFMKFK
                     G G+GG++AG A AAAA YGAHH+ HA   P+               GFGH  HGKFKHGK G  +KHG           G   KFK
Subjt:  HGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLVHA--RPF---------------GFGH--HGKFKHGKFGKGWKHG-----------GKFMKFK

Query:  KWK
        KWK
Subjt:  KWK

AT5G17650.1 glycine/proline-rich protein5.9e-1744.5Show/hide
Query:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHG-------------YPPPPPYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHH
        G   +   D+G F ++A FA G   YP PHG             YP PPP   PPP GYPP  YPP  GYPPAGYP  G+P      P GYP  GY SH 
Subjt:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHG-------------YPPPPPYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHH

Query:  HYSGYGYGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLV---------HARPFGFGH-------HGKFKHGKFGKG---WKHGGKFMKFKKWK
             GY      GH HG     G+G ++AGG AAAA   GAHH+          H   +G+G+       HGKFKHGKFGK     KH GKF  FKKWK
Subjt:  HYSGYGYGHGHGYGHGHGHGYGHGMGGLLAGGAAAAAATYGAHHLV---------HARPFGFGH-------HGKFKHGKFGKG---WKHGGKFMKFKKWK

AT5G45350.1 proline-rich family protein5.5e-1544.78Show/hide
Query:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCG-YPPAGYPHGGHPHTAYPYPGGYPHA-GYSSHHHYSGYGYGHGH
        GG ++  +DKG            H YP P GYPPP  Y   PP GYP  GYPPP G YPPAGYP G +P    P PGGYP A GY  +    GYG G+  
Subjt:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCG-YPPAGYPHGGHPHTAYPYPGGYPHA-GYSSHHHYSGYGYGHGH

Query:  GYGHG---------HGHGYGHGMGGLLAGGAAAAAATYGAHHLVHA-----------------RPFGFGH-HGKFKHGKFGKGWKHGGKFM----KFKKW
          GHG         H  G+  G+GG++AG    AAA YGAHH+ H+                   +G+GH HGKFKHGK GK +KHG   M    KFKKW
Subjt:  GYGHG---------HGHGYGHGMGGLLAGGAAAAAATYGAHHLVHA-----------------RPFGFGH-HGKFKHGKFGKGWKHGGKFM----KFKKW

Query:  K
        K
Subjt:  K

AT5G45350.2 proline-rich family protein5.5e-1544.78Show/hide
Query:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCG-YPPAGYPHGGHPHTAYPYPGGYPHA-GYSSHHHYSGYGYGHGH
        GG ++  +DKG            H YP P GYPPP  Y   PP GYP  GYPPP G YPPAGYP G +P    P PGGYP A GY  +    GYG G+  
Subjt:  GGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCG-YPPAGYPHGGHPHTAYPYPGGYPHA-GYSSHHHYSGYGYGHGH

Query:  GYGHG---------HGHGYGHGMGGLLAGGAAAAAATYGAHHLVHA-----------------RPFGFGH-HGKFKHGKFGKGWKHGGKFM----KFKKW
          GHG         H  G+  G+GG++AG    AAA YGAHH+ H+                   +G+GH HGKFKHGK GK +KHG   M    KFKKW
Subjt:  GYGHG---------HGHGYGHGMGGLLAGGAAAAAATYGAHHLVHA-----------------RPFGFGH-HGKFKHGKFGKGWKHGGKFM----KFKKW

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTGGGAAGGACAATTACACTCAGGACAAAGGCATGTTTTCACATATGGCCGCGTTTGCTGCCGGGGCGCACCATTATCCTCGTCCTCATGGATATCCACCACC
CCCGCCATACGGATATCCCCCTCCGGGAGGGTACCCTCCGGCAGGGTACCCCCCTCCTTGTGGATACCCTCCGGCCGGGTATCCTCATGGTGGACACCCTCATACAGCCT
ATCCTTATCCCGGTGGGTACCCTCATGCTGGCTATTCTAGCCACCACCATTACTCTGGGTATGGATACGGACACGGGCACGGATACGGACACGGGCACGGACACGGATAC
GGACACGGCATGGGGGGATTGTTGGCTGGTGGAGCAGCTGCAGCAGCCGCCACTTACGGTGCTCATCATCTTGTTCATGCACGCCCATTTGGCTTTGGTCATCATGGAAA
GTTCAAACATGGAAAATTTGGCAAGGGTTGGAAGCATGGAGGCAAGTTCATGAAATTCAAGAAATGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTGGGAAGGACAATTACACTCAGGACAAAGGCATGTTTTCACATATGGCCGCGTTTGCTGCCGGGGCGCACCATTATCCTCGTCCTCATGGATATCCACCACC
CCCGCCATACGGATATCCCCCTCCGGGAGGGTACCCTCCGGCAGGGTACCCCCCTCCTTGTGGATACCCTCCGGCCGGGTATCCTCATGGTGGACACCCTCATACAGCCT
ATCCTTATCCCGGTGGGTACCCTCATGCTGGCTATTCTAGCCACCACCATTACTCTGGGTATGGATACGGACACGGGCACGGATACGGACACGGGCACGGACACGGATAC
GGACACGGCATGGGGGGATTGTTGGCTGGTGGAGCAGCTGCAGCAGCCGCCACTTACGGTGCTCATCATCTTGTTCATGCACGCCCATTTGGCTTTGGTCATCATGGAAA
GTTCAAACATGGAAAATTTGGCAAGGGTTGGAAGCATGGAGGCAAGTTCATGAAATTCAAGAAATGGAAGTGA
Protein sequenceShow/hide protein sequence
MEGGKDNYTQDKGMFSHMAAFAAGAHHYPRPHGYPPPPPYGYPPPGGYPPAGYPPPCGYPPAGYPHGGHPHTAYPYPGGYPHAGYSSHHHYSGYGYGHGHGYGHGHGHGY
GHGMGGLLAGGAAAAAATYGAHHLVHARPFGFGHHGKFKHGKFGKGWKHGGKFMKFKKWK