; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010530 (gene) of Chayote v1 genome

Gene IDSed0010530
OrganismSechium edule (Chayote v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationLG10:35275691..35278943
RNA-Seq ExpressionSed0010530
SyntenySed0010530
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022557.1 Glycine-rich RNA-binding protein RZ1A [Cucurbita argyrosperma subsp. argyrosperma]2.5e-9488.94Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWST DR LKEAF+K+G L EAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG
          RD++RDR+RDFGGGRGSN  DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGG G  +GR+GPDRNGDRSGGRNR TGDRGGSGSDRYSRDRSG
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRSSG
        PYERRSSG
Subjt:  PYERRSSG

XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]6.6e-9589.62Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWST DR LKEAF+K+G LVEAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS
          RDHDRDR RDFGG RGSN GDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGGGG G   GR+GPDRNGDR GGRNRS+GDRGGSGSDRYSRDRS
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRSSGGSR
        GPYERR SGG R
Subjt:  GPYERRSSGGSR

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]4.5e-9689.62Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWST DR LKEAF+K+G LVEAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS
          RDHDRDR RDFGG RGSN GDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY  GGGG G  +GR+GPDRNGDR GGRNRSTGDRGGSGSDRYSRDRS
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRSSGGSR
        GPYERR SGG R
Subjt:  GPYERRSSGGSR

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]3.5e-9689.57Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEEVEYRCFIGGLSWST DRSLKEAF+K+G L+EAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG
          RDHDRDR+RDFGGGRGSN GDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGG    +GR+GPDRNGDR GGRNRS+GDRGGSGSDR++RDRSG
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGGSR
        PYERRSSGG R
Subjt:  PYERRSSGGSR

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]7.7e-9690.05Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWST DR LKEAF+K+G LVEAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG
          RDHDRDR RD GG RGSN GDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGG G  +GR+GPDRNGDR GGRNRSTGDRGGSGSDRYSRDRSG
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGGSR
        PYERR SGG R
Subjt:  PYERRSSGGSR

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein3.2e-9589.62Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWST DR LKEAF+K+G LVEAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS
          RDHDRDR RDFGG RGSN GDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGGGG G   GR+GPDRNGDR GGRNRS+GDRGGSGSDRYSRDRS
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRSSGGSR
        GPYERR SGG R
Subjt:  GPYERRSSGGSR

A0A1S3C164 glycine-rich RNA-binding protein RZ1A2.2e-9689.62Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWST DR LKEAF+K+G LVEAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS
          RDHDRDR RDFGG RGSN GDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY  GGGG G  +GR+GPDRNGDR GGRNRSTGDRGGSGSDRYSRDRS
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRSSGGSR
        GPYERR SGG R
Subjt:  GPYERRSSGGSR

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A1.7e-9689.57Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEEVEYRCFIGGLSWST DRSLKEAF+K+G L+EAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG
          RDHDRDR+RDFGGGRGSN GDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGG    +GR+GPDRNGDR GGRNRS+GDRGGSGSDR++RDRSG
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGGSR
        PYERRSSGG R
Subjt:  PYERRSSGGSR

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like1.3e-9388.94Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWST DR LKEAF+K+G L EAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG
          RD++RDR+RDFGGGRGSN  DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGG G  +GR+GPDRNGDRSGGRNR TGDRGGSGSDRYSRDRSG
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRSSG
        PYERRSSG
Subjt:  PYERRSSG

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like1.6e-9489.9Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWST DR LKEAF+K+G L EAKVVVD+FSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG
          RDHDRDR+RDFGGGRGSN  DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS GGGSG  +GR+GPDRNGDRSGGRNR TGDRGGSGSDRYSRDRSG
Subjt:  RDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRSSG
        PYERRSSG
Subjt:  PYERRSSG

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A3.8e-2946.07Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR
        +VEYRCF+GGL+W+TDDR+L+ AF +YG ++++K++ DR +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR

Query:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGG--SGRDNGRFGPDRNGDRSGGRNRSTGDRGGSG
                  GGG G  GG  ++ G  G +       GG GG Y  GGR+  YSGGGG  S R  G  G    G R GG     G  GG G
Subjt:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGG--SGRDNGRFGPDRNGDRSGGRNRSTGDRGGSG

Q03250 Glycine-rich RNA-binding protein 71.6e-2744.39Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR
        +VEYRCF+GGL+W+TDDR+L+ AF +YG ++++K++ DR +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR

Query:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSG
                  GGG    GG  ++ G  G ++    S GG GGR  G      GGGG     G  G    G R GG     G+ GG G
Subjt:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSG

Q03878 Glycine-rich RNA-binding protein6.7e-2645.16Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR
        EVEYRCF+GGL+W+T+D SL++AF ++G + ++K++ DR +GRSRGFGFVTF ++K+M +AI+ MNG +LDGR+ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR

Query:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGS
                  GGGR   GG  +  G  G+  R    EGG GG YGGR  +  GGGG G   G +G    G R GG     G  GGS
Subjt:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGS

Q43472 Glycine-rich RNA-binding protein blt8013.2e-2845.76Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR
        +VEYRCF+GGL W+TDD+SL+ AF KYG ++++K++ DR +GRSRGFGFVTF   +AM +AI+AMNG DLDGR+ITV++AQ  +  G             
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR

Query:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRN
                 FGGG G  GG   + G  G+        GGR G  GG   +  GGGG G   G +G  R G  SGG N
Subjt:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRN

Q9LIN3 Glycine-rich RNA-binding protein RZ1A7.6e-6258.57Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+E+ EYRCFIGGL+W+T DR L++AF+KYG LVEAKVV+D+FSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGD  R
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGGGG---------S
        GRDR +DRDRSR   GGRG  GGDCFKCGKPGHFARECPSE  R G                              RYG +DD+YS              
Subjt:  GRDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGGGG---------S

Query:  GRDNG--RFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSGPYERRSSGG
         RD G  R+GPDR+G+R+GGR+R  G RG  G +R+SR    PY+R  +GG
Subjt:  GRDNG--RFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSGPYERRSSGG

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.1e-2844.39Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR
        +VEYRCF+GGL+W+TDDR+L+ AF +YG ++++K++ DR +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR

Query:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSG
                  GGG    GG  ++ G  G ++    S GG GGR  G      GGGG     G  G    G R GG     G+ GG G
Subjt:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 27.4e-2846.2Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGRD
        +VEYRCF+GGL+W+TDDR+L+ AF +YG ++++K++ DR +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G    G  
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGDRPRGRD

Query:  RDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNG
                   GGG    GG  +  G  G+ +R     GG GG YGG   +  GGG  G + G +G    G
Subjt:  RDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.4e-6358.57Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+E+ EYRCFIGGL+W+T DR L++AF+KYG LVEAKVV+D+FSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGD  R
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGGGG---------S
        GRDR +DRDRSR   GGRG  GGDCFKCGKPGHFARECPSE  R G                              RYG +DD+YS              
Subjt:  GRDRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYSGGGG---------S

Query:  GRDNG--RFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSGPYERRSSGG
         RD G  R+GPDR+G+R+GGR+R  G RG  G +R+SR    PY+R  +GG
Subjt:  GRDNG--RFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSGPYERRSSGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 19.0e-2645.7Show/hide
Query:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR
        EVEYRCF+GGL+W+T+D  L+  F ++G ++++K++ DR SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G   RG   
Subjt:  EVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDR

Query:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGG
                  GGG  S GG  +  G  G ++      GG GG Y  R   Y SGGGG GR  G  G    G   GG   S G  GG
Subjt:  DHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY-SGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.4e-2539.13Show/hide
Query:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS    DR L+ AF ++G +++ +++++R +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G           G
Subjt:  MAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDRDHDRDRSRDFGGGRGSNG----GDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGS-GR-----------DNGRFGPDR--NGDRSGGRNR
        RD  +       FGGG G  G     +CFKCG+ GH+AR+CPS  GGRGG  GG   + S  GGS GR           D  R+  DR     R G R+R
Subjt:  RDRDHDRDRSRDFGGGRGSNG----GDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGS-GR-----------DNGRFGPDR--NGDRSGGRNR

Query:  STGDRGGSGSDRYSRDRSGPYERRSSGGSR
                  DRY+ DR      R +GG R
Subjt:  STGDRGGSGSDRYSRDRSGPYERRSSGGSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTCTTGGATGTAGCTTGCGTAATGGCTGAAGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCCTGGTCAACTGATGACAGATCTCTCAAAGAAGCGTTTGA
TAAGTATGGTCGACTTGTTGAGGCCAAGGTAGTTGTTGACAGGTTTTCAGGACGTTCCCGTGGTTTTGGCTTTGTTACTTTTGATGAGAAAAAGGCTATGGACGAGGCAA
TCAAAGCCATGAATGGAATGGATTTAGATGGCCGGTCTATTACAGTTGATAAGGCTCAGCCTAACCAAGGTTCAGGTAGAGATCATGATGGTGATCGTCCACGTGGTCGT
GATCGTGACCATGATCGTGATCGAAGTAGAGATTTTGGTGGTGGACGTGGATCTAACGGTGGTGATTGCTTTAAATGTGGGAAGCCGGGACATTTTGCTCGAGAATGTCC
CAGTGAAGGTGGTAGAGGAGGTAGGTATGGAGGTAGGGATGACAAATACAGTGGTGGCGGAGGCAGCGGCAGAGACAATGGTCGTTTTGGTCCAGATCGAAATGGAGATA
GATCTGGTGGACGCAATAGGAGTACTGGTGATCGAGGAGGTTCCGGAAGTGATCGATACAGTCGCGACCGCTCGGGGCCATATGAGCGACGGAGTTCTGGTGGCTCTCGT
CCTTGA
mRNA sequenceShow/hide mRNA sequence
GGCTCTTTGCCCTACAAACCAGTTCAGTTTCTCGGCCTTTAGATTTTTTTTCTCTTTCTTTTTGGTTCTCTCAACAGCGAATCGAATCTTAGGGTTTACGTTCTTAGGAA
TTTTGTCAGCTCAATTCTTCTGGATAATTCCTTTTATCAGCTTAATCGTGGCATCGATTCATCGGATCGAGAATTTTTTTCAGTATTTTTTTTTTTTTTTTTAATCTCTG
TATGTAATTCGTTTGATTTAAACGAGTTAATTGCGTTGTTTTTTGTGAAAAAAATAATAGGATTTCTCGAATTCTTCGCCCCTTTTTCTCATTTTGGGAAATTAAATTGA
TTTGAATGCGGTTCTTGGATGTAGCTTGCGTAATGGCTGAAGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCCTGGTCAACTGATGACAGATCTCTCAAAGAAGCG
TTTGATAAGTATGGTCGACTTGTTGAGGCCAAGGTAGTTGTTGACAGGTTTTCAGGACGTTCCCGTGGTTTTGGCTTTGTTACTTTTGATGAGAAAAAGGCTATGGACGA
GGCAATCAAAGCCATGAATGGAATGGATTTAGATGGCCGGTCTATTACAGTTGATAAGGCTCAGCCTAACCAAGGTTCAGGTAGAGATCATGATGGTGATCGTCCACGTG
GTCGTGATCGTGACCATGATCGTGATCGAAGTAGAGATTTTGGTGGTGGACGTGGATCTAACGGTGGTGATTGCTTTAAATGTGGGAAGCCGGGACATTTTGCTCGAGAA
TGTCCCAGTGAAGGTGGTAGAGGAGGTAGGTATGGAGGTAGGGATGACAAATACAGTGGTGGCGGAGGCAGCGGCAGAGACAATGGTCGTTTTGGTCCAGATCGAAATGG
AGATAGATCTGGTGGACGCAATAGGAGTACTGGTGATCGAGGAGGTTCCGGAAGTGATCGATACAGTCGCGACCGCTCGGGGCCATATGAGCGACGGAGTTCTGGTGGCT
CTCGTCCTTGATAGAATCATAGCTTATCTGTTAAGGTTGTCTCTGTTGCAGTTTGGAGTCCGAAAGTGCAGAAGTTGGCGTTAGTGTTGAGATGTTTGTGTTTCTATGTG
ATGAATTTGGTATATTGGCACAGTGATGTCTAATGTGTTCTTGACATATTCGTTCAAATCTGGTTTTATGGTCTTTGAATGCCATTGTAACTGCTGGATTACTTGTGGCG
CACACAGGAAAATTGCAATAACTGCTGCACCGTTTCATTTTCGAAATTCTGTTTTTGAATACAACTAGACCTGGTTTTTGATGTTGGATGGGTATGCAGAGGAACTGGTT
TTTGATAAGCTGTGTGACTAGGGATCTGTGTCTGACCTGGAAACTCGAAGTGAAATCTATTTCAGAACATTATTCCCATTGTCTTATAAATTCATCAGGAGCGTACAGGT
AATTTTTTTTTGAAACTGGAAATTGGAGCTTCGCTCCATTATATCCAAGGTAACCACATCCGTCCCTAGGTCAGATACTGGAAGACATCGAAGGAATGGAGACATGGGAG
GTGTCTACAAGTTAATGTTACAAGTGACCTCGGACCTTGAGGGGATCACACCTTCAAAACCCAAGCCTTCAACTACTTGCGCCTTCCCTTGGGGACAAGAGTGTACAGGT
AATTACTCTTCCTTCGATGTTGTGTCATCACCCTGTCATCTATGTATTGTGTTATATTGATGTTGTGAACTTTTTGGCAGCATCCTTCTTTTTATGGTCTTCTTGTTGGG
TGCGTAATACAATTTCTTGTTAATTGAGCGGGTTAAACTTAAAATTTACCAAGGACTTTGGATGCTCAAGCAATTTTGCAAATAAACTCATTTAATCTACAAATACGGCC
TGGTGGCTTATGGTCGAGGGGCTCGTAAGCTCTTGATGAGTTCAGCAACTGCTGCCTCATCTTTTCCACTTATGGTTCAATTTCCAGTTTGATCTTGTTGGGGAGACTTT
TGGTGCTCTTTTTTTTGTTTCTGGATCTGCTTGTTATTGGTGGTTTTGTTTGCGGAAGTTGATTCAGATGTGTGATTAAGCTGTTCATTCAAAGCTAGTTTGGAGTTTCT
CTTATGATTGTTCCTTTCATCTTTTGGATCGGCCTGGTTCATATTCATAGAGGGTTGTTTCGATTCTTTTCTTCTCCGCCGCCAGTTTCGTGTAGTTTATCTAATTCTCT
TCCCTGTTTGTTGCTATGATGAAAGTGTTATAGGCGATACCGATGAAGGCAATTGTTGACCCTTCTGTCGACGACAAATGCTTACAGACTATATTTTAAACATCTTTGGC
ATTTTTTTGTTTTTCCATTATCTTTTTGTGGCCCCAAACATTTTCAAGCTATAACTCTTTTAGGGAAAGAGGAAAATGGACATATATGAATTTGTGATTGTTTTGTTAGG
AAGATGCATGATTTAGTGGTGTGAAATTTCATTTTAGTATGGGTTCTGGAAAATTTTATGCCCCTCTATGATTGAAGTTTGTG
Protein sequenceShow/hide protein sequence
MRFLDVACVMAEEVEYRCFIGGLSWSTDDRSLKEAFDKYGRLVEAKVVVDRFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGR
DRDHDRDRSRDFGGGRGSNGGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGSGRDNGRFGPDRNGDRSGGRNRSTGDRGGSGSDRYSRDRSGPYERRSSGGSR
P