; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010559 (gene) of Chayote v1 genome

Gene IDSed0010559
OrganismSechium edule (Chayote v1)
DescriptionNuclear transcription factor Y subunit C-2
Genome locationLG10:35109340..35112414
RNA-Seq ExpressionSed0010559
SyntenySed0010559
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]3.5e-12791.01Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG
        SP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q PR P+MPFMPWPH Q QQQQQTQQQSDG
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]4.7e-12489.85Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQP  GVGAGQLPYSNPY+T  MVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSD
        SP+D+PYYYVP QHPV A GMI+GKQLDQANMYG T Q PRPP MPFMPWPH Q QQQQQTQQQSD
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSD

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]1.4e-12389.59Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQ   GVGAGQLPYSNPYQTAPM ASGTP+ITIP TQQ S+FSNSPHQLAFQQAQHFH QQQQQQQQQLQ+FWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQS---QQQQQTQQQSD
        SP+D+PYYYVPSQHPV A+GMI+GKQLDQANMYGAT Q PRPP +PFMPWPH Q+   QQQQQTQQQSD
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQS---QQQQQTQQQSD

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]4.7e-12489.96Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQ   GVGAGQLPYSNPYQTAPM ASGTP+ITIP TQQ S+FSNSPHQLAFQQAQHFH QQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQS---QQQQQTQQQSD
        SP+D+PYYYVPSQHPV A+GMI+GKQLDQANMYGAT Q PRPP +PFMPWPH Q+   QQQQQTQQQSD
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQS---QQQQQTQQQSD

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]2.5e-12590.23Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQH QQ QQP   VGAGQLPYSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSD
        SP+D+PYYYVPSQHPVGA+GMI+GKQLDQ NMYG T Q PR P+MPFMPWPH Q QQQQQTQQQSD
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSD

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein1.7e-12791.01Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG
        SP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q PR P+MPFMPWPH Q QQQQQTQQQSDG
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG

A0A1S3C190 nuclear transcription factor Y subunit C-21.7e-12791.01Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG
        SP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q PR P+MPFMPWPH Q QQQQQTQQQSDG
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG

A0A5A7SLP2 Nuclear transcription factor Y subunit C-21.7e-12791.01Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQP  GVGAGQL YSNPYQTAPMVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG
        SP+D+PYYYVPSQHPVGA+GMI+GKQLDQANMYGAT Q PR P+MPFMPWPH Q QQQQQTQQQSDG
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG

A0A6J1DV19 nuclear transcription factor Y subunit C-22.3e-12489.85Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQP  GVGAGQLPYSNPY+T  MVASGTP+ITIP TQ  S+FSNSPHQLA+QQAQHFHHQQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSD
        SP+D+PYYYVP QHPV A GMI+GKQLDQANMYG T Q PRPP MPFMPWPH Q QQQQQTQQQSD
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSD

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like2.3e-12489.96Show/hide
Query:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        MDQSERSQHQQQ QQ   GVGAGQLPYSNPYQTAPM ASGTP+ITIP TQQ S+FSNSPHQLAFQQAQHFH QQQQQQQQQLQMFWANQ+QEIEQT+DFK
Subjt:  MDQSERSQHQQQPQQP--GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQS---QQQQQTQQQSD
        SP+D+PYYYVPSQHPV A+GMI+GKQLDQANMYGAT Q PRPP +PFMPWPH Q+   QQQQQTQQQSD
Subjt:  SPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQS---QQQQQTQQQSD

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-43.5e-6156.65Show/hide
Query:  QPQQP-GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSP------HQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPL
        QPQ   GV AG       Y+ A  V +  P++    +Q + +F  +P      HQL +QQAQ FH Q QQQQQ+QLQ FWA ++ +IEQT+DFKNHSLPL
Subjt:  QPQQP-GVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSP------HQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPL

Query:  ARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPSD-I
        ARIKKIMKADEDVRMISAEAPVIFAKACE+F+LELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G P+D  
Subjt:  ARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPSD-I

Query:  PY-YYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQ-QTQQQSD
        PY YYVP Q   GA              YG    HP         W   Q QQ++   +QQSD
Subjt:  PY-YYVPSQHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-91.7e-5555.29Show/hide
Query:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI
        QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQQQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKI
Subjt:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI

Query:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP
        MKADEDVRMISAEAPV+FA+ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + +  PY Y+P
Subjt:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP

Query:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS
        +   P+G  GM++G      N  GA       P  P+M  P  Q Q   Q  Q++
Subjt:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-25.5e-6769.16Show/hide
Query:  MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        M+QSE  Q QQQ        G + Y  P  YQ+ P+                    N+   +AFQQA HFHH  QQQQQQQLQMFWANQ+QEIE T+DFK
Subjt:  MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPSDIPYYYVPSQ
        GSP   PYYY+  Q
Subjt:  GSPSDIPYYYVPSQ

Q9FMV5 Nuclear transcription factor Y subunit C-44.5e-5365.06Show/hide
Query:  HHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTD
        +H   QQQQQQLQMFW  Q QEIEQ +DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+F+LELT+RSW+H EENKRRTLQKNDIAAAI+RTD
Subjt:  HHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTD

Query:  VFDFLVDIIPRDELKEE--GLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGK-QLDQANMY
        +FDFLVDI+PR+E+KEE            V  + S +PYYY P   P    GM++G+  +D + +Y
Subjt:  VFDFLVDIIPRDELKEE--GLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGK-QLDQANMY

Q9SMP0 Nuclear transcription factor Y subunit C-11.1e-5464.71Show/hide
Query:  HHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTD
        +H   QQQQQQLQ+FW  Q QEIEQ +DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+F+LELT+RSW+H EENKRRTLQKNDIAAAI+RTD
Subjt:  HHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTD

Query:  VFDFLVDIIPRDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP
        +FDFLVDI+PRDE+K+E   +    + V  + S +PYYY P   P G  GM++G+     N  G   Q P
Subjt:  VFDFLVDIIPRDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMILGKQLDQANMYGATTQHP

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C91.2e-5655.29Show/hide
Query:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI
        QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQQQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKI
Subjt:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI

Query:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP
        MKADEDVRMISAEAPV+FA+ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + +  PY Y+P
Subjt:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP

Query:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS
        +   P+G  GM++G      N  GA       P  P+M  P  Q Q   Q  Q++
Subjt:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C91.2e-5655.29Show/hide
Query:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI
        QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQQQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKI
Subjt:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI

Query:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP
        MKADEDVRMISAEAPV+FA+ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + +  PY Y+P
Subjt:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP

Query:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS
        +   P+G  GM++G      N  GA       P  P+M  P  Q Q   Q  Q++
Subjt:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C91.2e-5655.29Show/hide
Query:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI
        QQ    +G + Y +NPYQT PM    T + T+      +  +  P QLAF Q     HQQQQQQQ  QQLQ FW NQ +EIE+T+DFKNHSLPLARIKKI
Subjt:  QQPGVGAGQLPY-SNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQ--QQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI

Query:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP
        MKADEDVRMISAEAPV+FA+ACEMF+LELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + +  PY Y+P
Subjt:  MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPSDIPYYYVP

Query:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS
        +   P+G  GM++G      N  GA       P  P+M  P  Q Q   Q  Q++
Subjt:  S-QHPVGASGMILGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C23.9e-6869.16Show/hide
Query:  MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        M+QSE  Q QQQ        G + Y  P  YQ+ P+                    N+   +AFQQA HFHH  QQQQQQQLQMFWANQ+QEIE T+DFK
Subjt:  MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPSDIPYYYVPSQ
        GSP   PYYY+  Q
Subjt:  GSPSDIPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C23.9e-6869.16Show/hide
Query:  MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK
        M+QSE  Q QQQ        G + Y  P  YQ+ P+                    N+   +AFQQA HFHH  QQQQQQQLQMFWANQ+QEIE T+DFK
Subjt:  MDQSERSQHQQQPQQPGVGAGQLPYSNP--YQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV
        NH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMF+LELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VV
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VV

Query:  GSPSDIPYYYVPSQ
        GSP   PYYY+  Q
Subjt:  GSPSDIPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAACCGCAGCAGCCCGGTGTCGGTGCCGGGCAATTACCTTATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTC
GGGAACTCCTTCTATTACGATCCCCTCGACTCAGCAATCATCCAATTTCTCTAATTCTCCTCACCAGCTTGCCTTTCAGCAGGCTCAACATTTCCACCACCAGCAACAAC
AGCAGCAGCAACAACAGCTGCAAATGTTTTGGGCAAACCAAATTCAAGAGATTGAACAAACATCTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAGAAAATA
ATGAAAGCGGATGAAGATGTCCGAATGATTTCAGCTGAAGCGCCCGTTATATTCGCAAAGGCGTGCGAAATGTTTGTCTTGGAGTTGACTCTGCGATCCTGGATTCATAC
AGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATCGCAGCTGCAATATCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAG
AGGAAGGACTTGGAATCACGAAAGCTTCTATTCCCGTTGTTGGTTCGCCGTCTGATATTCCTTATTACTACGTTCCATCTCAGCATCCGGTGGGTGCTTCGGGGATGATC
TTGGGAAAGCAATTAGATCAAGCGAACATGTACGGTGCCACGACTCAACATCCCCGACCACCGACGATGCCTTTCATGCCATGGCCACATGCACAATCTCAGCAGCAGCA
ACAAACTCAGCAGCAAAGTGATGGATAG
mRNA sequenceShow/hide mRNA sequence
TGAAAATCTCTTTCAGCAATTCTGCTTCTCCATCCACTCTCTCTCTGCCACTTGTAATCCGCCATAGCTCTCTCTCCTCGACACGTTTCTCTTTTTATAACCCATTTCTT
CTTTCTCTCTTTAGGGTTTTTTTATCTACTCAATGAGCTTTGCTGGATTTCCAGTTTGAAAATCTGAGAAGTGTGGAAAATACACTACCTATTGTGAGCCATGGATCAAT
CAGAGCGTTCTCAGCATCAGCAACAACCGCAGCAGCCCGGTGTCGGTGCCGGGCAATTACCTTATTCTAATCCTTACCAAACAGCTCCGATGGTGGCTTCGGGAACTCCT
TCTATTACGATCCCCTCGACTCAGCAATCATCCAATTTCTCTAATTCTCCTCACCAGCTTGCCTTTCAGCAGGCTCAACATTTCCACCACCAGCAACAACAGCAGCAGCA
ACAACAGCTGCAAATGTTTTGGGCAAACCAAATTCAAGAGATTGAACAAACATCTGACTTCAAGAACCACAGTCTCCCCCTTGCCCGAATCAAGAAAATAATGAAAGCGG
ATGAAGATGTCCGAATGATTTCAGCTGAAGCGCCCGTTATATTCGCAAAGGCGTGCGAAATGTTTGTCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAAC
AAAAGGAGAACTTTACAGAAGAATGATATCGCAGCTGCAATATCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGACT
TGGAATCACGAAAGCTTCTATTCCCGTTGTTGGTTCGCCGTCTGATATTCCTTATTACTACGTTCCATCTCAGCATCCGGTGGGTGCTTCGGGGATGATCTTGGGAAAGC
AATTAGATCAAGCGAACATGTACGGTGCCACGACTCAACATCCCCGACCACCGACGATGCCTTTCATGCCATGGCCACATGCACAATCTCAGCAGCAGCAACAAACTCAG
CAGCAAAGTGATGGATAGGTGAAAGAAGTAGGCGTTTTCGAGACGGTCATGATATGATTGGTAGAGGTGATACCGAGTGATGTTTAATGTGTTTACTGTCTAGTTTAGTT
CATAAAAAAAAAAGCTTGTAGTAGAGAACTTGTTAATGATGACAAGTTGCAGTTAAGTTTGTATGATGAGAGGGTGTGTTTATCTCTTGTTACTCTAATTATCTTTATTA
ATATAATGTACAACAATGTATGTGGAAGAGGAGGATTCAACTTTGGCAAAAGAACACTATAATTTGAATTTTGTTGAGGTTGTGTTTGGCTGG
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQPQQPGVGAGQLPYSNPYQTAPMVASGTPSITIPSTQQSSNFSNSPHQLAFQQAQHFHHQQQQQQQQQLQMFWANQIQEIEQTSDFKNHSLPLARIKKI
MKADEDVRMISAEAPVIFAKACEMFVLELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPSDIPYYYVPSQHPVGASGMI
LGKQLDQANMYGATTQHPRPPTMPFMPWPHAQSQQQQQTQQQSDG