; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010561 (gene) of Chayote v1 genome

Gene IDSed0010561
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:2610958..2614426
RNA-Seq ExpressionSed0010561
SyntenySed0010561
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600897.1 hypothetical protein SDJN03_06130, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5777.5Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N  MEEK+R PLADVVSDCVKRWFQDTLKEA AGD AMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDT+KG AWINRASK   +V +VSDRHP YLAT+SE S+ RVKQDDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

XP_022941871.1 uncharacterized protein LOC111447103 [Cucurbita moschata]2.4e-5977.5Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKS P  A R QQFAK+VVSSKKPQS    + K KIRVSPPE PI+D+VR++SEPA+P  +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDTRKG AWINRASK   +VWK SDRHPAYLAT+SESSD RVK+DDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

XP_022957582.1 uncharacterized protein LOC111458931 [Cucurbita moschata]2.9e-5777.5Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N  MEEK+R PLADVVSDCVKRWFQDTLKEA AGD AMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDT+KG AWINRASK    V +VSDRHP YLAT+SE S+ RVKQDDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

XP_023552657.1 uncharacterized protein LOC111810237 [Cucurbita pepo subsp. pepo]8.3e-6078.12Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKSLP  A R QQFAK+VVSSKKPQS    + K KIRVSPPE PI+D+VR++SEPA+P  +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDTRKG AWINRASK   +VWK SDRHPAYLAT+SESSD RVK+DDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

XP_038892993.1 uncharacterized protein LOC120081889 [Benincasa hispida]1.6e-5875.76Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEK-----HRTPLADVVSDCVKRWFQDTLKEAKAGDT
        MAKSLPS   R  QFAK+VV+SKKPQSA  P PK++IRVSPPE PI+ TVR++SE  K NN+MEE+     HRTPLADVVSDCVKRWFQDTLKEA+AGDT
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEK-----HRTPLADVVSDCVKRWFQDTLKEAKAGDT

Query:  AMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        +MQVLVGQMFCSGYGVPKDT+KG AWINRASK+    WKVSDRHP YLAT+SESSD RVKQDD+R
Subjt:  AMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

TrEMBL top hitse value%identityAlignment
A0A0A0KM25 Uncharacterized protein5.6e-5473.91Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN-NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQV
        MAKSLPS A RFQQFAKLV SSK PQS   PK K++IR SP E PI+ +VR++SEP K    + EEK+RTPLADVVSDCVKRWFQDTLKEAKAGDT+MQV
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPN-NDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQV

Query:  LVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        LVGQMFCSGYGVPK+T+KG AWI RASK   +VWK SDRHP YLAT+SESSD RVK+D++R
Subjt:  LVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

A0A6J1FNN7 uncharacterized protein LOC1114471031.2e-5977.5Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKS P  A R QQFAK+VVSSKKPQS    + K KIRVSPPE PI+D+VR++SEPA+P  +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDTRKG AWINRASK   +VWK SDRHPAYLAT+SESSD RVK+DDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

A0A6J1GZI5 uncharacterized protein LOC1114589311.4e-5777.5Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N  MEEK+R PLADVVSDCVKRWFQDTLKEA AGD AMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDT+KG AWINRASK    V +VSDRHP YLAT+SE S+ RVKQDDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

A0A6J1JUC7 uncharacterized protein LOC1114884395.4e-5776.88Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKSLP SA   QQFAK+ V SKKPQSAA PKPK++IRVSP E PI DTVR++SEP K N  MEE++R PLADVVSDCVKRWFQDTLKEA AGD AMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR
        VGQMFCSGYGVPKDT+KG AWINRASK    V +VSDRHP YLAT+SE S+ RVKQDDIR
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR

A0A6J1K2L5 uncharacterized protein LOC1114918266.0e-5676.77Show/hide
Query:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL
        MAKSLP  A R QQFAK+VVSSKKPQS   P+ K KIRVSPPE PI+D+VR++SEPA+P  +ME K+R PLADVVSDC KRWFQDTLKEA AGDTAMQVL
Subjt:  MAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVL

Query:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVK
        VGQMFCSGYGVPKDTRKG AWI+RASK   +V K SDRHP YLAT+SESSD RVK
Subjt:  VGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)7.5e-2751.75Show/hide
Query:  IRVSPPEIPIADTVRIVSEPAKPNNDMEEKHR-TPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKV
        I+ S P  PI+       + +      E   R  PL+ VVSDC KRWF+DTL+EAKAG+  MQVL+GQM+ SGYGVPKD RKGR WI +AS+   +VWKV
Subjt:  IRVSPPEIPIADTVRIVSEPAKPNNDMEEKHR-TPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKV

Query:  SDRHPAYLATNSES
         D+ P Y A++S+S
Subjt:  SDRHPAYLATNSES

AT5G05360.1 unknown protein5.9e-3246.2Show/hide
Query:  SAIRFQQFAKLVVSSKKPQSAAP-PKPKTKI------RVSPPEIPIADTVRIV-------SEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAG
        S +RF +FA  + S    +   P P P+ K+      R +   +  ++ V++        S PA P +  +  +R PLA VV DCV+RWFQDTLKEAK+G
Subjt:  SAIRFQQFAKLVVSSKKPQSAAP-PKPKTKI------RVSPPEIPIADTVRIV-------SEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAG

Query:  DTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSD
        D  MQVLVGQM+CSGYG+PKD  KGRAWIN+AS++  + W+VSD+ P Y A++S+S+D
Subjt:  DTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSD

AT5G05360.2 unknown protein8.0e-2946.26Show/hide
Query:  SAIRFQQFAKLVVSSKKPQSAAP-PKPKTKI------RVSPPEIPIADTVRIV-------SEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAG
        S +RF +FA  + S    +   P P P+ K+      R +   +  ++ V++        S PA P +  +  +R PLA VV DCV+RWFQDTLKEAK+G
Subjt:  SAIRFQQFAKLVVSSKKPQSAAP-PKPKTKI------RVSPPEIPIADTVRIV-------SEPAKPNNDMEEKHRTPLADVVSDCVKRWFQDTLKEAKAG

Query:  DTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHP
        D  MQVLVGQM+CSGYG+PKD  KGRAWIN+AS++  + W+VSD+ P
Subjt:  DTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAGTAGAAATACCATTTCCCTCCTCGACCAAATCTTTTGGCAGATACAAAAGCAACCCTGCAATTGATTTGCAGAGGCCGAAACTGGCAATTCCCAATTCCAT
CACACCAAAATCCGTCCCATTAATGGCGAAATCGCTTCCATCATCAGCGATTCGCTTTCAACAATTCGCCAAACTCGTCGTCTCCTCCAAAAAGCCTCAATCCGCCGCAC
CACCCAAGCCCAAGACCAAGATCCGAGTTTCGCCGCCCGAAATTCCGATCGCCGACACCGTCAGAATCGTCTCGGAACCGGCGAAGCCAAACAACGACATGGAGGAGAAG
CATCGGACTCCGTTGGCCGATGTGGTGTCCGACTGCGTCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAAAGCCGGCGATACGGCGATGCAGGTCTTGGTTGGGCA
AATGTTTTGTTCAGGCTATGGAGTTCCTAAGGATACTCGGAAGGGACGTGCTTGGATCAATCGAGCTTCGAAAAGTCACCCAACAGTTTGGAAAGTAAGCGATAGACATC
CAGCTTACTTGGCGACTAATTCTGAATCAAGCGATGGGAGAGTAAAACAAGATGATATCAGATGA
mRNA sequenceShow/hide mRNA sequence
AAGACGAATATGGAAATAGTAGAAATACCATTTCCCTCCTCGACCAAATCTTTTGGCAGATACAAAAGCAACCCTGCAATTGATTTGCAGAGGCCGAAACTGGCAATTCC
CAATTCCATCACACCAAAATCCGTCCCATTAATGGCGAAATCGCTTCCATCATCAGCGATTCGCTTTCAACAATTCGCCAAACTCGTCGTCTCCTCCAAAAAGCCTCAAT
CCGCCGCACCACCCAAGCCCAAGACCAAGATCCGAGTTTCGCCGCCCGAAATTCCGATCGCCGACACCGTCAGAATCGTCTCGGAACCGGCGAAGCCAAACAACGACATG
GAGGAGAAGCATCGGACTCCGTTGGCCGATGTGGTGTCCGACTGCGTCAAGCGGTGGTTCCAGGACACGCTCAAGGAGGCCAAAGCCGGCGATACGGCGATGCAGGTCTT
GGTTGGGCAAATGTTTTGTTCAGGCTATGGAGTTCCTAAGGATACTCGGAAGGGACGTGCTTGGATCAATCGAGCTTCGAAAAGTCACCCAACAGTTTGGAAAGTAAGCG
ATAGACATCCAGCTTACTTGGCGACTAATTCTGAATCAAGCGATGGGAGAGTAAAACAAGATGATATCAGATGATCCTCTTCATTACTTCACTAATCTAATTAGTAATCC
TTGAAGTGACAAGTTCAGTTCACAGGCAAATGTGGTGACCTAAAGCTTTTGGTGTTATCCATTGTAATCTACTCTCCTCATGTTTATTATACTGTGTTGGTTAAACCAAA
TTTTGAAGGGTGAATGCATTTGTTTTTTCAATGATCCTTTTCCAGCCTGATGCCTATATTTATTCTTTATAGAAACAGAACTTTCATTTTTAAGTATAAATTGGG
Protein sequenceShow/hide protein sequence
MEIVEIPFPSSTKSFGRYKSNPAIDLQRPKLAIPNSITPKSVPLMAKSLPSSAIRFQQFAKLVVSSKKPQSAAPPKPKTKIRVSPPEIPIADTVRIVSEPAKPNNDMEEK
HRTPLADVVSDCVKRWFQDTLKEAKAGDTAMQVLVGQMFCSGYGVPKDTRKGRAWINRASKSHPTVWKVSDRHPAYLATNSESSDGRVKQDDIR