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Sed0010567 (gene) of Chayote v1 genome

Gene IDSed0010567
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG04:11273579..11274575
RNA-Seq ExpressionSed0010567
SyntenySed0010567
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592046.1 hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2168.09Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDID-GVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F+PN  +N R F SE D+S SD    D G  ++EGFD R  PHELIAKR ARAQISSFSV EG+GRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDID-GVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

KAG7024924.1 hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2168.09Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDID-GVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F+PN  +N R F SE D+S SD    D G  ++EGFD R  PHELIAKR ARAQISSFSV EG+GRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDID-GVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

XP_022139627.1 uncharacterized protein LOC111010482 [Momordica charantia]2.3e-2066.67Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG---NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F PN  +N R+   E D+     GD DG     +EEGFD R  PHELIAKRLARAQISSFSV EGVGRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG---NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

XP_022936189.1 uncharacterized protein LOC111442861 [Cucurbita moschata]2.1e-2170.21Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG-NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F+PN  +N R F SE D+S SD    DG   +EEGFD R  PHELIAKR ARAQISSFSV EG+GRTLKGRDLSRVRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG-NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

XP_023536166.1 uncharacterized protein LOC111797411 [Cucurbita pepo subsp. pepo]3.6e-2169.15Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDG-VGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F+PN   N R F SE D+S SD    DG   +EEGFD R  PHELIAKR ARAQISSFSV EG+GRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDG-VGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

TrEMBL top hitse value%identityAlignment
A0A6J1CEH3 uncharacterized protein LOC1110104821.1e-2066.67Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG---NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F PN  +N R+   E D+     GD DG     +EEGFD R  PHELIAKRLARAQISSFSV EGVGRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG---NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

A0A6J1F7L6 uncharacterized protein LOC1114428611.0e-2170.21Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG-NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIP+ F+PN  +N R F SE D+S SD    DG   +EEGFD R  PHELIAKR ARAQISSFSV EG+GRTLKGRDLSRVRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVG-NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

A0A6J1FSC1 uncharacterized protein LOC1114464247.2e-2063.44Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIPR F+PN      +FD   D+  +D  + +    EEGF+ R  PHELIAKRL RAQISSFSV+EGVGRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

A0A6J1IX28 uncharacterized protein LOC1114806853.0e-1861.29Show/hide
Query:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        RSIPR F+PN      +F+   D+   D  + +    EEG + R  PHELIAKRL RAQISSFSV+EGVGRTLKGRDLS+VRN VL KTGFLE
Subjt:  RSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

A0A6J5UP07 Uncharacterized protein2.8e-1667.61Show/hide
Query:  DESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        +E   D GD D    EE +D +  PHE IA+RLAR+QISSFSVVEG GRTLKGRDLS+VRN VL KTGFLE
Subjt:  DESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15040.1 Protein of unknown function, DUF5842.3e-1057.45Show/hide
Query:  PHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        PHE++A+ LA++ + S SV+EG GRTLKGRDL +VRN V  +TGF++
Subjt:  PHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

AT3G45210.1 Protein of unknown function, DUF5847.9e-1154.39Show/hide
Query:  NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        +++G + +  PHE +AK     +++SFSV EG+GRTLKGRD+SRVRN +L KTGFL+
Subjt:  NEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

AT4G04630.1 Protein of unknown function, DUF5844.1e-1578.72Show/hide
Query:  PHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        PHE +A++LAR QISSFS+ EGVGRTLKGRDLS+VRN VL KTGFLE
Subjt:  PHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

AT4G21970.1 Protein of unknown function, DUF5841.1e-1578.72Show/hide
Query:  PHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE
        PHEL+AKRLAR QISSFS+ EG+GRTLKGRDLS+ RN VL +TGFLE
Subjt:  PHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLE

AT5G60680.1 Protein of unknown function, DUF5845.1e-1046.51Show/hide
Query:  EFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGF
        E+R NR R+    D + D+            NE+G D+   PHE +AK     +++SFSV EGVGRTLKGRDLSRVRN +  K GF
Subjt:  EFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATCGATTCCGCGGGAGTTTAGACCGAACAGAGGTAGAAACGAAAGGAGATTCGATTCGGAGGGCGATGAGTCTTCGAGCGACTGCGGCGATATCGACGGAGTTGG
CAATGAGGAAGGATTTGATTACAGAGCTCTGCCGCATGAATTGATAGCAAAGAGACTGGCTAGGGCTCAGATTTCGTCGTTTTCTGTGGTCGAAGGAGTTGGAAGAACTT
TGAAAGGAAGAGATCTGAGTAGAGTTAGAAATGTCGTTCTTATCAAAACTGGTTTTCTCGAATTATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGATCGATTCCGCGGGAGTTTAGACCGAACAGAGGTAGAAACGAAAGGAGATTCGATTCGGAGGGCGATGAGTCTTCGAGCGACTGCGGCGATATCGACGGAGTTGG
CAATGAGGAAGGATTTGATTACAGAGCTCTGCCGCATGAATTGATAGCAAAGAGACTGGCTAGGGCTCAGATTTCGTCGTTTTCTGTGGTCGAAGGAGTTGGAAGAACTT
TGAAAGGAAGAGATCTGAGTAGAGTTAGAAATGTCGTTCTTATCAAAACTGGTTTTCTCGAATTATGTTAA
Protein sequenceShow/hide protein sequence
MRSIPREFRPNRGRNERRFDSEGDESSSDCGDIDGVGNEEGFDYRALPHELIAKRLARAQISSFSVVEGVGRTLKGRDLSRVRNVVLIKTGFLELC