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Sed0010612 (gene) of Chayote v1 genome

Gene IDSed0010612
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:46376025..46377020
RNA-Seq ExpressionSed0010612
SyntenySed0010612
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056089.1 hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa]7.9e-1663.01Show/hide
Query:  RQKPKSPSCFFGIFSVFKSQDRESRQDDA--TDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        +++PKS SC F IF +FKS+D   R DDA   DD RKVWPSDGD GR WVA+P I+ KAKAYI+KIH +I SS
Subjt:  RQKPKSPSCFFGIFSVFKSQDRESRQDDA--TDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

KAG2402434.1 uncharacterized protein HKW66_Vig0236310 [Vigna angularis]3.6e-0847.22Show/hide
Query:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        G ++ KS S FF IF+VF S+       DA D +R+VWPSD D G   VA+P I+ KA+A+I K  KR+  S
Subjt:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

KAG6586063.1 hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2068.92Show/hide
Query:  RQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE
        RQKPKSPSCFF IFS+F+S+D   R+D+  DD RKVWPSD D  R WVA+P I+ KAKAYIDKIH +I SSGTE
Subjt:  RQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE

KAG6599163.1 hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1559.74Show/hide
Query:  RQKPKSPSCFFGIFSVFKSQDRESRQDD---ATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE
        R+KPKSPSC F I ++FKS+ R  R DD   A +D RKVWPSD D GR WVA+P I+ KAKAYID+IH +I  S  E
Subjt:  RQKPKSPSCFFGIFSVFKSQDRESRQDD---ATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE

XP_007145045.1 hypothetical protein PHAVU_007G205300g [Phaseolus vulgaris]1.2e-0848.61Show/hide
Query:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        G ++ KS S FF IF+VF S+    R  DA D +R+VWPSD D G   VA+P I+ KA+A+I K  KR+  S
Subjt:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ24 Uncharacterized protein2.3e-1661.84Show/hide
Query:  RQKPKSPSCFFGIFSVFKSQDRESRQDDA--TDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE
        +++ KS SC F IFS+FKS+D   R DDA   DD RKVWPSDGD GR WVA+P I+ KAKAYI+KIH +I SS T+
Subjt:  RQKPKSPSCFFGIFSVFKSQDRESRQDDA--TDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE

A0A0B2QS48 Uncharacterized protein1.7e-0847.22Show/hide
Query:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        G ++ KS S FF IF++F S+       DA+D  RKVWPSD D G   VA+P I+ KA+A+I K  KR+  S
Subjt:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

A0A5D3BDY2 Uncharacterized protein3.8e-1663.01Show/hide
Query:  RQKPKSPSCFFGIFSVFKSQDRESRQDDA--TDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        +++PKS SC F IF +FKS+D   R DDA   DD RKVWPSDGD GR WVA+P I+ KAKAYI+KIH +I SS
Subjt:  RQKPKSPSCFFGIFSVFKSQDRESRQDDA--TDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

I1LAZ2 Uncharacterized protein1.7e-0847.22Show/hide
Query:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        G ++ KS S FF IF++F S+       DA+D  RKVWPSD D G   VA+P I+ KA+A+I K  KR+  S
Subjt:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

V7BGN0 Uncharacterized protein5.9e-0948.61Show/hide
Query:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS
        G ++ KS S FF IF+VF S+    R  DA D +R+VWPSD D G   VA+P I+ KA+A+I K  KR+  S
Subjt:  GRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein4.4e-0438.16Show/hide
Query:  MGRQKPKSPSCFFGIFSVFKS-QDRESRQDDATDD---ARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIIS
        MG +     S  F +FS FK+ +      D + DD    RK   SD D  R WVA+P I+ KA A+I K H   +S
Subjt:  MGRQKPKSPSCFFGIFSVFKS-QDRESRQDDATDD---ARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGACAAAAGCCGAAGTCGCCCTCTTGCTTCTTCGGGATCTTCAGTGTCTTCAAATCTCAAGACAGAGAAAGCAGGCAAGACGATGCAACAGACGACGCACGGAA
GGTGTGGCCAAGCGATGGTGATAGCGGCCGACAATGGGTGGCTGATCCTCAAATCAATTGGAAGGCCAAAGCTTACATCGACAAGATCCATAAACGAATAATCTCGTCCG
GAACCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGACAAAAGCCGAAGTCGCCCTCTTGCTTCTTCGGGATCTTCAGTGTCTTCAAATCTCAAGACAGAGAAAGCAGGCAAGACGATGCAACAGACGACGCACGGAA
GGTGTGGCCAAGCGATGGTGATAGCGGCCGACAATGGGTGGCTGATCCTCAAATCAATTGGAAGGCCAAAGCTTACATCGACAAGATCCATAAACGAATAATCTCGTCCG
GAACCGAATGA
Protein sequenceShow/hide protein sequence
MGRQKPKSPSCFFGIFSVFKSQDRESRQDDATDDARKVWPSDGDSGRQWVADPQINWKAKAYIDKIHKRIISSGTE