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Sed0010656 (gene) of Chayote v1 genome

Gene IDSed0010656
OrganismSechium edule (Chayote v1)
DescriptionDUF4219 domain-containing protein
Genome locationLG01:24380096..24381352
RNA-Seq ExpressionSed0010656
SyntenySed0010656
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV73185.1 DUF4219 domain-containing protein [Cephalotus follicularis]1.5e-0926.67Show/hide
Query:  PLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLS---------KLKLNE---NLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVEN
        P FFDG +Y  W+ +M  F+  +D++ W +    L          K+K NE    ++  NAK  +I++ AL S   D+I+  +   ++W  LE+ +  +N
Subjt:  PLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLS---------KLKLNE---NLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVEN

Query:  FPCTTNDLFDVKENCNSQNQENFYEVEYEKCDGVCQCLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFL--EFDS
            T+ L  ++E+ +    EN     +E+     + L D   E+   K    + N  SLT +  +   E+ +H      LNE  +L DK  F   E D 
Subjt:  FPCTTNDLFDVKENCNSQNQENFYEVEYEKCDGVCQCLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFL--EFDS

Query:  QEKNSLLYV--LREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEK-CSHNHNISFVRATPIM-----PRQFHAISKCAHNENF
           +S L +  L E E L   E+   K+S    +  + +LDN++ + +   DK GL     K   H  N    +  P M      R  H  + C +  NF
Subjt:  QEKNSLLYV--LREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEK-CSHNHNISFVRATPIM-----PRQFHAISKCAHNENF

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]3.6e-1139.53Show/hide
Query:  HKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCN
        H + EDE + E+++   + D              NE  AL+DK++FLE D  EK++L+ VL+E E    ++L  AKE+IKKLTI AQ+L  II++ KS  
Subjt:  HKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCN

Query:  DKKGLSCANE-KCSHNHNISFVRATPIMP
        DK+GL   +E     +   +FV+A+PI+P
Subjt:  DKKGLSCANE-KCSHNHNISFVRATPIMP

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]5.3e-1037.01Show/hide
Query:  CLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVF-----KIFVL--------NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAK
        C   H +++      +DEVN + L+YDEL +AFE+MQ+       K  +L        +EN +L D I  L+ +  + ++L+ +L++ ES    EL  AK
Subjt:  CLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVF-----KIFVL--------NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAK

Query:  ESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNIS-FVRATPIMPR
        + IK+LTIGAQ+LD II+  K   DK+GL   NE  + + + + FV+A+P MP+
Subjt:  ESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNIS-FVRATPIMPR

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]3.5e-1436.36Show/hide
Query:  LTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQH----------------------------VFKIFVLNENF-------------------ALIDK
        L  H ++D +H   +D+V  E L+ DEL + FESMQ+                                F  NENF                   AL+DK
Subjt:  LTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQH----------------------------VFKIFVLNENF-------------------ALIDK

Query:  IKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCS-HNHNISFVRATPIMPR
        ++FLE DS EK++L+ VL+E E    +EL  AKE+IKKLTIGAQ+LD II++ KS  DK+GL   +E  +  +   +FV+A+PI+P+
Subjt:  IKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCS-HNHNISFVRATPIMPR

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]8.1e-0345Show/hide
Query:  GVLESHCIDKPLFFDGTNYEVWRKRMKIFLLGIDFNFWYV
        G++E     +P +FDG+NY  W+ RMKI+L  ID+N W +
Subjt:  GVLESHCIDKPLFFDGTNYEVWRKRMKIFLLGIDFNFWYV

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]7.8e-1449.47Show/hide
Query:  NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNISFVRATPIMPR
        NE  AL+DK++FLE DS EK++L+ VL+E E    ++L  AKE+IKKLTIGAQ+LD II++ KS  DK+ L   +E  + +   +FV+A+PI+P+
Subjt:  NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNISFVRATPIMPR

TrEMBL top hitse value%identityAlignment
A0A1Q3BXR3 DUF4219 domain-containing protein3.1e-0823.45Show/hide
Query:  PLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLS---------KLKLNE---NLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVEN
        P FF+G +Y  W+ +M  F+  +D++ W +    L          ++K NE    ++  NAK  +I++ AL S   D+I+  +   ++W  LE+ + V+N
Subjt:  PLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLS---------KLKLNE---NLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVEN

Query:  FPCTTNDLFDVKENCNSQNQENFYEVEYEKCDGV---------CQCLTD-HLNEDFDHKSDE-DEVNQESLTYDELLDAFESMQHVFKIFVLNENFALID
            T+ L  ++E+ +    EN     +++             C CL +  L ++    S+E + +  E+  Y   L   ES++     F +NE   +++
Subjt:  FPCTTNDLFDVKENCNSQNQENFYEVEYEKCDGV---------CQCLTD-HLNEDFDHKSDE-DEVNQESLTYDELLDAFESMQHVFKIFVLNENFALID

Query:  KIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEK-CSHNHNISFVRATPIM-----PRQFHAISK
            L  D  E+N  L +          E+   K+S    +  + +LDN++ + +   DK GL     K   H  N    +  P M      R  H  + 
Subjt:  KIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEK-CSHNHNISFVRATPIM-----PRQFHAISK

Query:  CAHNENF
        C + +NF
Subjt:  CAHNENF

A0A1Q3BYT7 DUF4219 domain-containing protein7.4e-1026.67Show/hide
Query:  PLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLS---------KLKLNE---NLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVEN
        P FFDG +Y  W+ +M  F+  +D++ W +    L          K+K NE    ++  NAK  +I++ AL S   D+I+  +   ++W  LE+ +  +N
Subjt:  PLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLS---------KLKLNE---NLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVEN

Query:  FPCTTNDLFDVKENCNSQNQENFYEVEYEKCDGVCQCLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFL--EFDS
            T+ L  ++E+ +    EN     +E+     + L D   E+   K    + N  SLT +  +   E+ +H      LNE  +L DK  F   E D 
Subjt:  FPCTTNDLFDVKENCNSQNQENFYEVEYEKCDGVCQCLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFL--EFDS

Query:  QEKNSLLYV--LREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEK-CSHNHNISFVRATPIM-----PRQFHAISKCAHNENF
           +S L +  L E E L   E+   K+S    +  + +LDN++ + +   DK GL     K   H  N    +  P M      R  H  + C +  NF
Subjt:  QEKNSLLYV--LREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEK-CSHNHNISFVRATPIM-----PRQFHAISKCAHNENF

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein3.8e-1449.47Show/hide
Query:  NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNISFVRATPIMPR
        NE  AL+DK++FLE DS EK++L+ VL+E E    ++L  AKE+IKKLTIGAQ+LD II++ KS  DK+ L   +E  + +   +FV+A+PI+P+
Subjt:  NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNISFVRATPIMPR

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.8e-1139.53Show/hide
Query:  HKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCN
        H + EDE + E+++   + D              NE  AL+DK++FLE D  EK++L+ VL+E E    ++L  AKE+IKKLTI AQ+L  II++ KS  
Subjt:  HKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAKESIKKLTIGAQQLDNIIDISKSCN

Query:  DKKGLSCANE-KCSHNHNISFVRATPIMP
        DK+GL   +E     +   +FV+A+PI+P
Subjt:  DKKGLSCANE-KCSHNHNISFVRATPIMP

A0A6J1DS74 uncharacterized protein LOC1110238062.5e-1037.01Show/hide
Query:  CLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVF-----KIFVL--------NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAK
        C   H +++      +DEVN + L+YDEL +AFE+MQ+       K  +L        +EN +L D I  L+ +  + ++L+ +L++ ES    EL  AK
Subjt:  CLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVF-----KIFVL--------NENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKELQIAK

Query:  ESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNIS-FVRATPIMPR
        + IK+LTIGAQ+LD II+  K   DK+GL   NE  + + + + FV+A+P MP+
Subjt:  ESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNIS-FVRATPIMPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTTAGGTGTTCTTGAAAGTCATTGCATTGATAAACCTTTATTTTTTGATGGTACAAATTATGAAGTTTGGAGAAAGAGAATGAAAATATTTTTGCTCGGTAT
TGATTTCAATTTTTGGTATGTTTGCGAACATGATTTATCAAAATTGAAATTGAATGAAAATTTGATCTCTTGCAATGCTAAAGTTATGAATATTATGTATAATGCTCTAG
ATAGTAAGCTATGTGATAAAATTGCACATTTTAAATATGTTTATGATGTTTGGTATTTTCTTGAAAATATGTATAGTGTAGAAAATTTTCCTTGTACTACTAATGATCTA
TTTGATGTGAAGGAAAATTGTAATTCTCAAAATCAAGAAAATTTTTATGAAGTGGAATATGAAAAATGTGATGGAGTCTGTCAATGCTTAACAGATCATTTGAATGAGGA
TTTCGACCACAAAAGTGATGAAGATGAGGTAAATCAAGAATCTCTTACTTATGATGAATTACTTGATGCATTTGAAAGCATGCAACATGTTTTTAAAATTTTTGTCTTGA
ATGAAAATTTTGCCTTAATTGACAAAATTAAATTTCTTGAATTTGATAGTCAAGAGAAAAATAGTCTTTTGTATGTGCTTAGAGAAAAAGAATCACTTACTAATAAAGAG
CTTCAAATTGCAAAAGAATCAATTAAGAAATTGACTATTGGTGCTCAACAATTAGATAACATTATTGATATTAGTAAATCTTGTAATGATAAAAAGGGATTAAGCTGTGC
AAATGAAAAATGTTCACATAATCATAATATTAGCTTTGTTAGAGCCACCCCTATTATGCCCAGACAATTTCATGCTATATCTAAATGTGCTCATAATGAAAATTTTAATC
ACAAGCATGGAAAATGTAGTGATTTACATGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTTAGGTGTTCTTGAAAGTCATTGCATTGATAAACCTTTATTTTTTGATGGTACAAATTATGAAGTTTGGAGAAAGAGAATGAAAATATTTTTGCTCGGTAT
TGATTTCAATTTTTGGTATGTTTGCGAACATGATTTATCAAAATTGAAATTGAATGAAAATTTGATCTCTTGCAATGCTAAAGTTATGAATATTATGTATAATGCTCTAG
ATAGTAAGCTATGTGATAAAATTGCACATTTTAAATATGTTTATGATGTTTGGTATTTTCTTGAAAATATGTATAGTGTAGAAAATTTTCCTTGTACTACTAATGATCTA
TTTGATGTGAAGGAAAATTGTAATTCTCAAAATCAAGAAAATTTTTATGAAGTGGAATATGAAAAATGTGATGGAGTCTGTCAATGCTTAACAGATCATTTGAATGAGGA
TTTCGACCACAAAAGTGATGAAGATGAGGTAAATCAAGAATCTCTTACTTATGATGAATTACTTGATGCATTTGAAAGCATGCAACATGTTTTTAAAATTTTTGTCTTGA
ATGAAAATTTTGCCTTAATTGACAAAATTAAATTTCTTGAATTTGATAGTCAAGAGAAAAATAGTCTTTTGTATGTGCTTAGAGAAAAAGAATCACTTACTAATAAAGAG
CTTCAAATTGCAAAAGAATCAATTAAGAAATTGACTATTGGTGCTCAACAATTAGATAACATTATTGATATTAGTAAATCTTGTAATGATAAAAAGGGATTAAGCTGTGC
AAATGAAAAATGTTCACATAATCATAATATTAGCTTTGTTAGAGCCACCCCTATTATGCCCAGACAATTTCATGCTATATCTAAATGTGCTCATAATGAAAATTTTAATC
ACAAGCATGGAAAATGTAGTGATTTACATGAGAAGTAA
Protein sequenceShow/hide protein sequence
MATLGVLESHCIDKPLFFDGTNYEVWRKRMKIFLLGIDFNFWYVCEHDLSKLKLNENLISCNAKVMNIMYNALDSKLCDKIAHFKYVYDVWYFLENMYSVENFPCTTNDL
FDVKENCNSQNQENFYEVEYEKCDGVCQCLTDHLNEDFDHKSDEDEVNQESLTYDELLDAFESMQHVFKIFVLNENFALIDKIKFLEFDSQEKNSLLYVLREKESLTNKE
LQIAKESIKKLTIGAQQLDNIIDISKSCNDKKGLSCANEKCSHNHNISFVRATPIMPRQFHAISKCAHNENFNHKHGKCSDLHEK