; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010660 (gene) of Chayote v1 genome

Gene IDSed0010660
OrganismSechium edule (Chayote v1)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationLG07:11152793..11153828
RNA-Seq ExpressionSed0010660
SyntenySed0010660
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014066.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-9280.26Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MA SL S+FLKSQIPIPIPI+A +AT  V++PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS+TLSRLLKADLVA LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAV+RSEY ADLG+YAEVAAAL+RNGA EEIDRLVCDL+D +R I   DKGLIKL+KAVI G+RRESTVRIYRMM+RSGWGS +K D+Y VRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGSY
        LS+GL+RLGEME+ DE+N +F+D VGS+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGSY

XP_022954347.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita moschata]4.1e-9280.26Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MA SL S+FLKSQIPIPIPI+A +AT  V++PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS+TLSRLLKADLVA LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAV+RSEY ADLG+YAEVAAAL+RNGA EEIDRLVCDL+D +R I   DKGLIKL+KAVI G+RRESTVRIYRMM+RSGWGS +K D+Y VRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGSY
        LS+GL+RLGEME+ DE+N +F+D VGS+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGSY

XP_022992386.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita maxima]1.8e-9280.7Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MA SL S+FLKSQIPIPIPI+A +AT  V++PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS+TLSRLLKADLVA LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAV+RSEY  DLG+YAEVAAAL+RNGA EEIDRLVCDL+D +R I   DKGLIKL+KAVI G+RRESTVRIYRMM+RSGWGS +K D+YMVRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGSY
        LS+GL+RLGEME+ DEIN +F+D VGS+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGSY

XP_023522652.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Cucurbita pepo subsp. pepo]8.3e-9380.7Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MA SL S+FLKSQIPIPIPI+A +AT  V++PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS+TLSRLLKADLVA LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAV+RSEY ADLG+YAEVAAAL+RNGAAEEIDRLVCDL+D +R I   DKGLIKL+KAVI G+RRESTVRIYRMM+RSGWGS +K D+Y VRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGSY
        LS+GL+RLGEME+ DE+N +F+D VGS+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGSY

XP_038898717.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Benincasa hispida]1.1e-9281.94Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MASS+ S+FLKSQI IPIP++A +A  AV++PVRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS+TLSRLLKADLVA+LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAVIRSEY ADLG+YAEVAAAL+RNGAAEEIDRLVCDLD G+  I   DKGLIKL+KAVI G+RRESTVRIYRMMRR+GWGS +K D+Y+VRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGS
        LS+GL+R GEMEL DEINREF+D VG+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGS

TrEMBL top hitse value%identityAlignment
A0A0A0K6N6 Uncharacterized protein2.7e-8979.13Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MASSL S+FLKSQI IPIP +  ++  AV+  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS+TLSRLLKADLVA LKELLRQ+R
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGG--DKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMV
        CALALEVFAVI+SEY A+LGLYAEVAAAL+RNGAAEEIDRLV DLD G+  I+ G  DKGLIKL+KAVI G RRESTVRIYRMMRR GWGS +K D+YM+
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGG--DKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMV

Query:  RVLSRGLKRLGEMELVDEINREFKDFVGSY
        +VLS+GL+RLGE+EL DEINREF+D VGS+
Subjt:  RVLSRGLKRLGEMELVDEINREFKDFVGSY

A0A1S3CGD3 uncharacterized protein LOC1035005972.7e-8979.48Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MASSL S+FLKSQI IPIP +  +A  AV+  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS+TLSRLLKADLVA LKELLRQ+R
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGG--DKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMV
        CALALEVFAVIRSEY A+LGLYAEVAAAL+RNGAAEEIDRLVCDLD  +  I+ G  DKGLIKL+KAVI G RRESTVRIYRMMRR+GWGS +K D+YM+
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGG--DKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMV

Query:  RVLSRGLKRLGEMELVDEINREFKDFVGS
        +V+S+GL+R+GE+EL DEINREF+D VGS
Subjt:  RVLSRGLKRLGEMELVDEINREFKDFVGS

A0A5A7V0E2 Uncharacterized protein5.4e-9079.91Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MASSLRS+FLKSQI IPIP +  +A  AV+  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAERSDPTKLQQVLS+TLSRLLKADLVA LKELLRQ+R
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGG--DKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMV
        CALALEVFAVIRSEY A+LGLYAEVAAAL+RNGAAEEIDRLVCDLD  +  I+ G  DKGLIKL+KAVI G RRESTVRIYRMMRR+GWGS +K D+YM+
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGG--DKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMV

Query:  RVLSRGLKRLGEMELVDEINREFKDFVGS
        +V+S+GL+R+GE+EL DEINREF+D VGS
Subjt:  RVLSRGLKRLGEMELVDEINREFKDFVGS

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic2.0e-9280.26Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MA SL S+FLKSQIPIPIPI+A +AT  V++PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS+TLSRLLKADLVA LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAV+RSEY ADLG+YAEVAAAL+RNGA EEIDRLVCDL+D +R I   DKGLIKL+KAVI G+RRESTVRIYRMM+RSGWGS +K D+Y VRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGSY
        LS+GL+RLGEME+ DE+N +F+D VGS+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGSY

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic8.9e-9380.7Show/hide
Query:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR
        MA SL S+FLKSQIPIPIPI+A +AT  V++PVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAE+SDPTKL+QVLS+TLSRLLKADLVA LKELLRQDR
Subjt:  MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDR

Query:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV
        CALALEVFAV+RSEY  DLG+YAEVAAAL+RNGA EEIDRLVCDL+D +R I   DKGLIKL+KAVI G+RRESTVRIYRMM+RSGWGS +K D+YMVRV
Subjt:  CALALEVFAVIRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRV

Query:  LSRGLKRLGEMELVDEINREFKDFVGSY
        LS+GL+RLGEME+ DEIN +F+D VGS+
Subjt:  LSRGLKRLGEMELVDEINREFKDFVGSY

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.6e-0631.88Show/hide
Query:  LSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEEIDRLVCDLDD
        +S E + A + LKR + +   +L + + S +SRLLK+DLV+ L E  RQ++  L ++++ V+R E  Y  D+  Y ++   LARN   +E  ++  DL  
Subjt:  LSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEEIDRLVCDLDD

Query:  GERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRS
         E   D    G   L++  +  E     +R+Y  MR S
Subjt:  GERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRS

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic1.5e-4450.48Show/hide
Query:  PITAVSATTAVTIP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIR
        P  + S T +V +P      +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA R+  +    +    L RL+K+DL++ L+ELLRQD C LA+ V + +R
Subjt:  PITAVSATTAVTIP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIR

Query:  SEY-DADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGS-AMKTDEYMVRVLSRGLKRLGE
        +EY   DL LYA++  AL RN   +EIDRL+ ++D  +++ D  DK L KL++AV+  ERRES VR+Y +MR SGWGS + + DEY+  VLS+GL RLGE
Subjt:  SEY-DADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGS-AMKTDEYMVRVLSRGLKRLGE

Query:  MELVDEIN
         +L  +++
Subjt:  MELVDEIN

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.6e-0637Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + + + + RLLK D++A + EL RQ+  ALA+++F VI+ +  Y  D+ +Y ++  +LA++   +E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEE

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-0731.88Show/hide
Query:  LSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEEIDRLVCDLDD
        +S E + A + LKR + +   +L + + S +SRLLK+DLV+ L E  RQ++  L ++++ V+R E  Y  D+  Y ++   LARN   +E  ++  DL  
Subjt:  LSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEEIDRLVCDLDD

Query:  GERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRS
         E   D    G   L++  +  E     +R+Y  MR S
Subjt:  GERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRS

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.1e-4550.48Show/hide
Query:  PITAVSATTAVTIP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIR
        P  + S T +V +P      +RCGPRDNRGPL+KGR LSTEAIQ+IQSLKRA R+  +    +    L RL+K+DL++ L+ELLRQD C LA+ V + +R
Subjt:  PITAVSATTAVTIP------VRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIR

Query:  SEY-DADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGS-AMKTDEYMVRVLSRGLKRLGE
        +EY   DL LYA++  AL RN   +EIDRL+ ++D  +++ D  DK L KL++AV+  ERRES VR+Y +MR SGWGS + + DEY+  VLS+GL RLGE
Subjt:  SEY-DADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGS-AMKTDEYMVRVLSRGLKRLGE

Query:  MELVDEIN
         +L  +++
Subjt:  MELVDEIN

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-0737Show/hide
Query:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + + + + RLLK D++A + EL RQ+  ALA+++F VI+ +  Y  D+ +Y ++  +LA++   +E
Subjt:  RGPLVKGRTL-STEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYAEVAAALARNGAAEE

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain2.3e-1633Show/hide
Query:  NRGPLVKGRTLSTEAIQAIQSLKRAE--------------RSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYA
        NR PL +GR LS EAIQA+Q+LKRA                S    L +V+ S   RLLK D+VA L+ELLRQ+ C+LAL+VF  IR E  Y   + +Y 
Subjt:  NRGPLVKGRTLSTEAIQAIQSLKRAE--------------RSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAVIRSE--YDADLGLYA

Query:  EVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRVLSRGLKRLGEMELVDEINREFKD
        ++   +A N   EE++ L   +   E+ +    +    L+  ++  +  +  +  Y  M+  G+    + D    RVL  GL+  GEM L   + ++  +
Subjt:  EVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRVLSRGLKRLGEMELVDEINREFKD

Query:  FVG
        + G
Subjt:  FVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCATCTCTTCGCTCCTCATTTCTCAAATCCCAAATTCCAATCCCGATTCCGATCACCGCCGTCTCCGCCACCACCGCCGTCACCATTCCGGTACGCTGCGGCCC
ACGCGACAACCGAGGACCACTAGTGAAAGGCAGAACCCTAAGCACGGAAGCAATCCAAGCCATCCAATCCCTGAAACGGGCCGAAAGATCCGACCCGACGAAGCTCCAGC
AAGTACTCTCCAGCACTCTCTCCCGGCTGCTCAAAGCCGACCTCGTCGCCGCCCTGAAGGAGCTCCTCCGGCAGGACCGTTGCGCCCTCGCCTTGGAGGTTTTCGCCGTC
ATCCGATCCGAGTACGACGCCGATCTCGGGCTCTACGCGGAGGTCGCGGCGGCGCTGGCCAGGAACGGGGCGGCGGAGGAGATCGACCGTCTGGTGTGCGACCTGGACGA
CGGTGAGAGGAAGATCGACGGCGGCGATAAGGGGTTGATTAAGCTGATGAAGGCGGTGATTGTGGGAGAGAGAAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGA
GGAGCGGTTGGGGGTCGGCCATGAAAACCGATGAGTATATGGTTAGGGTTTTGAGTAGGGGTTTGAAGAGGCTTGGGGAAATGGAGTTGGTGGATGAGATTAATAGGGAA
TTTAAAGATTTTGTTGGGAGTTATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTGTTACTCAAAAAAGAATACCCTTAAAAAAAATTCGTCACTCATAACACAGTAAATTCGGGTAGGTTATTGGGCCGACAATTTTCCACTTATGGCCCAAGCGAATAA
GTGTAGCAGCCTAGTTATAGGGCCCAATAACAAAACGCCAATGGGCCGAGCCTAAGTCCAAAGTTTGGCGAAGCAAGGGGTATAACAGTAATTGCAAAAGCACCCCACCA
AAAATCCCCAATCCATTATCCCAAATCTGCACTCTGCCATGGCATCATCTCTTCGCTCCTCATTTCTCAAATCCCAAATTCCAATCCCGATTCCGATCACCGCCGTCTCC
GCCACCACCGCCGTCACCATTCCGGTACGCTGCGGCCCACGCGACAACCGAGGACCACTAGTGAAAGGCAGAACCCTAAGCACGGAAGCAATCCAAGCCATCCAATCCCT
GAAACGGGCCGAAAGATCCGACCCGACGAAGCTCCAGCAAGTACTCTCCAGCACTCTCTCCCGGCTGCTCAAAGCCGACCTCGTCGCCGCCCTGAAGGAGCTCCTCCGGC
AGGACCGTTGCGCCCTCGCCTTGGAGGTTTTCGCCGTCATCCGATCCGAGTACGACGCCGATCTCGGGCTCTACGCGGAGGTCGCGGCGGCGCTGGCCAGGAACGGGGCG
GCGGAGGAGATCGACCGTCTGGTGTGCGACCTGGACGACGGTGAGAGGAAGATCGACGGCGGCGATAAGGGGTTGATTAAGCTGATGAAGGCGGTGATTGTGGGAGAGAG
AAGGGAATCGACGGTCAGGATTTATCGGATGATGAGGAGGAGCGGTTGGGGGTCGGCCATGAAAACCGATGAGTATATGGTTAGGGTTTTGAGTAGGGGTTTGAAGAGGC
TTGGGGAAATGGAGTTGGTGGATGAGATTAATAGGGAATTTAAAGATTTTGTTGGGAGTTATTGAAAATTTTTGTTGTATAATAAAATGACATTATGTTTCTTTCTATTT
TGAATTTGTTCTAATTCTTATTTCATATATATTGTCATTTAAATGA
Protein sequenceShow/hide protein sequence
MASSLRSSFLKSQIPIPIPITAVSATTAVTIPVRCGPRDNRGPLVKGRTLSTEAIQAIQSLKRAERSDPTKLQQVLSSTLSRLLKADLVAALKELLRQDRCALALEVFAV
IRSEYDADLGLYAEVAAALARNGAAEEIDRLVCDLDDGERKIDGGDKGLIKLMKAVIVGERRESTVRIYRMMRRSGWGSAMKTDEYMVRVLSRGLKRLGEMELVDEINRE
FKDFVGSY