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Sed0010666 (gene) of Chayote v1 genome

Gene IDSed0010666
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationLG11:28280766..28282179
RNA-Seq ExpressionSed0010666
SyntenySed0010666
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598970.1 hypothetical protein SDJN03_08748, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3258Show/hide
Query:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        M S+TLFKSL KFGHFG  AIARRS T N +L+F+SNPK I TN PQD SEAKDAINP  NEGM PGE+MM D AYSTA+H+S+K               
Subjt:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                  AKD+A RAKD +++  K+S++FV+ANAK VEK MNTKNRS
Subjt:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

XP_022933143.1 uncharacterized protein At4g13230 [Cucurbita moschata]9.9e-3258Show/hide
Query:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        M S TLFKSL KFGHFG  AIARRS T N +L+F+SNPK I TN PQD SEAKDAINP  NEGM PGE+MM D AYSTA+H+S+K               
Subjt:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                  AKD+A RAKD +++  K+S++FV+ANAK VEK MNTKNRS
Subjt:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

XP_022973925.1 uncharacterized protein At4g13230 [Cucurbita maxima]2.7e-2956.67Show/hide
Query:  MASFTLFKSLSKFGHFGVA-IARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        M S TLFKSL KFGHFG A IA RS T N +L F+SNPK I TN PQD SEAKDAINP  NEGM  GE MM D AYSTA+H+S+K               
Subjt:  MASFTLFKSLSKFGHFGVA-IARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                  AKD+A RAKD +++  K+S++FV+ANAK VEK MNTKNRS
Subjt:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

XP_023546410.1 uncharacterized protein At4g13230 [Cucurbita pepo subsp. pepo]1.9e-3056.67Show/hide
Query:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        M S TLFKSL KFGHFG  AIARRS T N +L+F+SNPK I TN PQD  EAKDAI P  NEGM PGE+MM D AYSTA+H+S+K               
Subjt:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                  AKD+A RAKD +++  K+S++FV+ANAK VEK MNTKNRS
Subjt:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

XP_038889268.1 uncharacterized protein At4g13230-like [Benincasa hispida]7.3e-3560.13Show/hide
Query:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK----------------
        MAS TLFK+L KFGHFG AI RRS T N TLI +SNPK I TN  QD SEAKDAINPG NEGMMPGENMM D AYSTA+H+S+K                
Subjt:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK----------------

Query:  -------------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                     AKDTAQRAKD L+D A +S++FV+AN K VEKSMNTKN S
Subjt:  -------------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

TrEMBL top hitse value%identityAlignment
A0A2N9J0W5 Uncharacterized protein1.0e-1342.86Show/hide
Query:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNS-PQDPSEAKDAINPGGNEGMMPGENM------MNDMAYSTAQHMSQK---------
        MAS +L   L KFGH G AIARR+ T+NP L  +SNP+ IQ +S P+  S A DA+  G N+    G+ +      M  M  +TAQ +++K         
Subjt:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNS-PQDPSEAKDAINPGGNEGMMPGENM------MNDMAYSTAQHMSQK---------

Query:  --AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKN
          AKDTAQ+AKD ++  A+ S+E ++ NA+ V++SMNTKN
Subjt:  --AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKN

A0A2N9J2L7 Uncharacterized protein1.2e-1440.79Show/hide
Query:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNS-PQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        MAS +L   L KFGH G AIARR+ T+NP L  +SNP+ IQ +S P+  S A DA+  G N+    G+ + N  A+STA+H++QK               
Subjt:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNS-PQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  --------------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKN
                      AKDTAQ+AKD ++  A+ S+E ++ NA+ V++SMNTKN
Subjt:  --------------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKN

A0A6J1CSM2 uncharacterized protein At4g13230-like4.6e-2754Show/hide
Query:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNSPQD-----PSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQKAK---------
        MASFTL K+L KF H G AIARRS   NP L+  SNPK + T SPQD       EAKDAINPG NE MMPGE+MM + AYSTAQH+ +KA          
Subjt:  MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNSPQD-----PSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQKAK---------

Query:  -------------DTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNR
                     D+AQRAKD +++  K S+EFV+ANA+ V+KSMNTKNR
Subjt:  -------------DTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNR

A0A6J1F3W7 uncharacterized protein At4g132304.8e-3258Show/hide
Query:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        M S TLFKSL KFGHFG  AIARRS T N +L+F+SNPK I TN PQD SEAKDAINP  NEGM PGE+MM D AYSTA+H+S+K               
Subjt:  MASFTLFKSLSKFGHFGV-AIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                  AKD+A RAKD +++  K+S++FV+ANAK VEK MNTKNRS
Subjt:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

A0A6J1ICL4 uncharacterized protein At4g132301.3e-2956.67Show/hide
Query:  MASFTLFKSLSKFGHFGVA-IARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------
        M S TLFKSL KFGHFG A IA RS T N +L F+SNPK I TN PQD SEAKDAINP  NEGM  GE MM D AYSTA+H+S+K               
Subjt:  MASFTLFKSLSKFGHFGVA-IARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQK---------------

Query:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS
                  AKD+A RAKD +++  K+S++FV+ANAK VEK MNTKNRS
Subjt:  ----------AKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKNRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein9.3e-0433.77Show/hide
Query:  SEAKDAINPGGNEG---MMPGENMMNDMAYSTAQHMSQKAKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKN
        +EA+  +    +EG   +      + D A +TA+    K KDT ++ KD +    + ++E ++A AK VE+SMNTKN
Subjt:  SEAKDAINPGGNEG---MMPGENMMNDMAYSTAQHMSQKAKDTAQRAKDKLMDNAKNSEEFVQANAKCVEKSMNTKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTTTACCCTGTTCAAAAGCCTTTCAAAGTTTGGTCATTTTGGTGTTGCAATTGCAAGGAGATCAGCCACCTACAACCCTACACTCATTTTTTCTTCTAACCC
TAAATGTATTCAGACAAATTCACCACAAGATCCATCAGAAGCCAAGGATGCCATAAACCCAGGAGGAAATGAAGGAATGATGCCTGGTGAAAATATGATGAATGATATGG
CTTACTCTACTGCACAACATATGAGTCAAAAGGCAAAGGACACAGCCCAAAGGGCAAAGGACAAATTGATGGACAATGCCAAAAACTCCGAGGAATTTGTGCAAGCAAAT
GCAAAGTGTGTCGAAAAAAGCATGAACACCAAGAACCGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCTTTACCCTGTTCAAAAGCCTTTCAAAGTTTGGTCATTTTGGTGTTGCAATTGCAAGGAGATCAGCCACCTACAACCCTACACTCATTTTTTCTTCTAACCC
TAAATGTATTCAGACAAATTCACCACAAGATCCATCAGAAGCCAAGGATGCCATAAACCCAGGAGGAAATGAAGGAATGATGCCTGGTGAAAATATGATGAATGATATGG
CTTACTCTACTGCACAACATATGAGTCAAAAGGCAAAGGACACAGCCCAAAGGGCAAAGGACAAATTGATGGACAATGCCAAAAACTCCGAGGAATTTGTGCAAGCAAAT
GCAAAGTGTGTCGAAAAAAGCATGAACACCAAGAACCGTTCTTAA
Protein sequenceShow/hide protein sequence
MASFTLFKSLSKFGHFGVAIARRSATYNPTLIFSSNPKCIQTNSPQDPSEAKDAINPGGNEGMMPGENMMNDMAYSTAQHMSQKAKDTAQRAKDKLMDNAKNSEEFVQAN
AKCVEKSMNTKNRS