; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010681 (gene) of Chayote v1 genome

Gene IDSed0010681
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG11:27375124..27375948
RNA-Seq ExpressionSed0010681
SyntenySed0010681
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-14992.7Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQTLKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+S DIFASDSIELL QCGIDFQKNNEEGIDVN FGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP TQ+ FFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]3.1e-14791.61Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW HNLEEEFAL+REIVDQFN+IAMDTEFPGVV+RPVGAFKNINEYNYQTLKDNVD LKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+SEDIFASDSIELL QCGIDF+KNNEEGIDVNRF ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQ+GFFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE+GQ+ N
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]1.5e-14992.7Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQTLKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+S DIFASDSIELL QCGIDFQKNNEEGIDVN FGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP TQ+ FFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

XP_023538244.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]4.4e-14992.34Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW+HN+EEEFAL+REIVD+FN+IAMDTEFPGVVVRPVGAFKNIN+YNYQTLKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+S DIFASDSIELL QCGIDFQKNNEEGIDVN FGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP TQ+ FFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]2.0e-14690.15Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE I+IREVW+HNLEEEFALIREIVDQFN+IAMDTEFPGVVVRPVG+FKNINEYNY+TLK+NVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+ EDI+ASDSIELL +CGIDF+K NEEGIDVNRF ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP TQ+ FFDLIHMYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLM+FCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

TrEMBL top hitse value%identityAlignment
A0A0A0LSM4 Poly(A)-specific ribonuclease9.2e-14588.69Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE I+IREVW+ NLEEEFALIR+IVDQFN+IAMDTEFPGVVVRPVG+FKNINEYNY+TL++NVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+ +DI+ASDSIELL +CGIDFQK +EEGIDVNRFGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP TQ+ FFDLIHMYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLM+FCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

A0A6J1BRI8 Poly(A)-specific ribonuclease1.5e-14791.61Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW HNLEEEFAL+REIVDQFN+IAMDTEFPGVV+RPVGAFKNINEYNYQTLKDNVD LKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+SEDIFASDSIELL QCGIDF+KNNEEGIDVNRF ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQ+GFFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE+GQ+ N
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

A0A6J1BVW9 Poly(A)-specific ribonuclease4.1e-14590.15Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKG+ I IREVW+ NLEEEFALIREIVD+FN+IAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFNVSEDIFASDSIELL QCGIDF+KNNEEGIDVNRFGELLMSSG+VLND V WVTFHSGYDFGYLLKLLTCR+LP TQ+GFFDLI++YFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGST+KYAGVLYGLGVE GQ TN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

A0A6J1GJJ8 Poly(A)-specific ribonuclease7.3e-15092.7Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQTLKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+S DIFASDSIELL QCGIDFQKNNEEGIDVN FGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP TQ+ FFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

A0A6J1KLE0 Poly(A)-specific ribonuclease7.3e-15092.7Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MSILPKGE IHIREVW+HN+EEEFAL+REIVDQFN+IAMDTEFPGVVVRPVGAFKNIN+YNYQTLKDNVDTLKLIQLGLTFSDE+GNLPTCGTDKFC+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREFN+S DIFASDSIELL QCGIDFQKNNEEGIDVN FGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP TQ+ FFDLI+MYFPMVYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKL++TFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN

SwissProt top hitse value%identityAlignment
Q9LEU4 Probable CCR4-associated factor 1 homolog 101.2e-12075Show/hide
Query:  KGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFRE
        K + I IREVW +NL EEFALIREIVD+F++IAMDTEFPGVV++PV  FK  N+ NY+TLK+NVD LKLIQ+GLTFSDE+GNLPTCGTDKFC+WQFNFRE
Subjt:  KGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFRE

Query:  FNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMK
        FN+ EDI+AS+SIELL QCGIDF+KN E+GIDV RFGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP+ Q+ FF L+++YFP VYDIKHLM 
Subjt:  FNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKLKE +F GST+KY GVLYGLGVEDG TT
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.4e-9664.02Show/hide
Query:  ELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNIN------EYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQF
        + I IREVW+HNLE+E ALI + +D F ++AMDTEFPG+V + V A  N N      EYNY TLK NV+ LKLIQLGLT SDE GNLPTCGT+K C+WQF
Subjt:  ELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNIN------EYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQF

Query:  NFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIK
        NFREFNV  D+FA DSIELL +  ID +KNNE G+D  RF ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP   S FFD +  +FP+VYDIK
Subjt:  NFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+KE FF GS  KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 67.6e-12073.8Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MS+  K + I IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+C+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREF++  DIFA DSIELL Q GID  KN  +GID  RF ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q+ FF LI++YFP VYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKLKE FF G   KY+GVLYGLGVE+GQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 75.6e-12375.74Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCVW
        MS+  K + I IREVW+ NLE E ALIRE+VD F F+AMDTEFPG+V RPVG FK   EY+Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+C+W
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCVW

Query:  QFNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYD
        QFNFREF++  DI+A+DSIELL Q GIDF KNNE GID  RF ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP TQ+GFF++I +YFP VYD
Subjt:  QFNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL+E FF GS +KY+GVLYGLGVE+GQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ

Q9UFF9 CCR4-NOT transcription complex subunit 85.0e-7955.09Show/hide
Query:  IREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFREFNVSED
        I EVW+ NLEEE   IREIV  +++IAMDTEFPGVVVRP+G F++  +Y YQ L+ NVD LK+IQLGLTF++E G  P+        WQFNF+ FN++ED
Subjt:  IREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFREFNVSED

Query:  IFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMKFCNSLH
        +++ DSI+LL   G+ FQK+ EEGID   F ELLM+SG+VL DNV W++FHSGYDFGY++KLLT   LP  +  FF +++++FP +YD+K+LMK C +L 
Subjt:  IFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMKFCNSLH

Query:  GGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQ--KYAGVLYGLGVEDGQTTN
        GGL ++A+ L+++RIG  HQAGSDSLLT   F ++KE FF  S    KY G LYGLG    Q  N
Subjt:  GGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQ--KYAGVLYGLGVEDGQTTN

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.4e-12173.8Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MS+  K + I IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+C+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREF++  DIFA DSIELL Q GID  KN  +GID  RF ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q+ FF LI++YFP VYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKLKE FF G   KY+GVLYGLGVE+GQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.4e-12173.8Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MS+  K + I IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+C+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREF++  DIFA DSIELL Q GID  KN  +GID  RF ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q+ FF LI++YFP VYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKLKE FF G   KY+GVLYGLGVE+GQ
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-11973.61Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ
        MS+  K + I IREVW+ NL+EE  LIR++VD F ++AMDTEFPG+VVRPVG FK+  +Y+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+C+WQ
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQ

Query:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI
        FNFREF++  DIFA DSIELL Q GID  KN  +GID  RF ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q+ FF LI++YFP VYDI
Subjt:  FNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKLKE FF G   KY+GVLYGLGVE+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVED

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-12475.74Show/hide
Query:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCVW
        MS+  K + I IREVW+ NLE E ALIRE+VD F F+AMDTEFPG+V RPVG FK   EY+Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+C+W
Subjt:  MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTD-KFCVW

Query:  QFNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYD
        QFNFREF++  DI+A+DSIELL Q GIDF KNNE GID  RF ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP TQ+GFF++I +YFP VYD
Subjt:  QFNFREFNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL+E FF GS +KY+GVLYGLGVE+GQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-12275Show/hide
Query:  KGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFRE
        K + I IREVW +NL EEFALIREIVD+F++IAMDTEFPGVV++PV  FK  N+ NY+TLK+NVD LKLIQ+GLTFSDE+GNLPTCGTDKFC+WQFNFRE
Subjt:  KGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFRE

Query:  FNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMK
        FN+ EDI+AS+SIELL QCGIDF+KN E+GIDV RFGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP+ Q+ FF L+++YFP VYDIKHLM 
Subjt:  FNVSEDIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKLKE +F GST+KY GVLYGLGVEDG TT
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTGCCGAAAGGTGAGTTGATTCATATCCGTGAGGTGTGGAGCCACAACTTGGAGGAAGAGTTCGCTCTAATTCGTGAAATTGTTGACCAATTTAACTTCAT
AGCCATGGATACAGAGTTTCCCGGCGTGGTGGTTCGCCCTGTCGGTGCGTTTAAGAACATCAATGAATATAACTACCAAACCCTCAAAGACAATGTCGACACCTTGAAGT
TGATTCAGTTGGGTCTTACGTTTTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACAGATAAGTTCTGCGTTTGGCAGTTCAATTTCCGGGAGTTCAACGTTAGCGAG
GATATCTTTGCTAGTGATTCGATTGAACTTTTGCACCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCGGTTCGGCGAGCTTCTAATGTC
ATCTGGGATTGTGTTGAATGATAATGTTTATTGGGTGACTTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAGTTGTTGACTTGCCGAAGCTTACCAGTGACACAGA
GTGGGTTTTTTGATTTGATCCATATGTATTTTCCAATGGTTTATGACATCAAACATTTGATGAAGTTTTGCAACAGTTTGCATGGTGGGCTGAACAAGCTTGCAGAGTTG
TTAGAAGTGGAGAGGATTGGAGTCTGCCATCAAGCAGGATCGGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAAGGAAACATTTTTCAATGGATCTACACAAAA
ATATGCAGGCGTTTTATACGGTCTCGGCGTCGAAGATGGTCAGACTACTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTGCCGAAAGGTGAGTTGATTCATATCCGTGAGGTGTGGAGCCACAACTTGGAGGAAGAGTTCGCTCTAATTCGTGAAATTGTTGACCAATTTAACTTCAT
AGCCATGGATACAGAGTTTCCCGGCGTGGTGGTTCGCCCTGTCGGTGCGTTTAAGAACATCAATGAATATAACTACCAAACCCTCAAAGACAATGTCGACACCTTGAAGT
TGATTCAGTTGGGTCTTACGTTTTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACAGATAAGTTCTGCGTTTGGCAGTTCAATTTCCGGGAGTTCAACGTTAGCGAG
GATATCTTTGCTAGTGATTCGATTGAACTTTTGCACCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCGGTTCGGCGAGCTTCTAATGTC
ATCTGGGATTGTGTTGAATGATAATGTTTATTGGGTGACTTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAGTTGTTGACTTGCCGAAGCTTACCAGTGACACAGA
GTGGGTTTTTTGATTTGATCCATATGTATTTTCCAATGGTTTATGACATCAAACATTTGATGAAGTTTTGCAACAGTTTGCATGGTGGGCTGAACAAGCTTGCAGAGTTG
TTAGAAGTGGAGAGGATTGGAGTCTGCCATCAAGCAGGATCGGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAAGGAAACATTTTTCAATGGATCTACACAAAA
ATATGCAGGCGTTTTATACGGTCTCGGCGTCGAAGATGGTCAGACTACTAACTAA
Protein sequenceShow/hide protein sequence
MSILPKGELIHIREVWSHNLEEEFALIREIVDQFNFIAMDTEFPGVVVRPVGAFKNINEYNYQTLKDNVDTLKLIQLGLTFSDEDGNLPTCGTDKFCVWQFNFREFNVSE
DIFASDSIELLHQCGIDFQKNNEEGIDVNRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPVTQSGFFDLIHMYFPMVYDIKHLMKFCNSLHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLKETFFNGSTQKYAGVLYGLGVEDGQTTN