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Sed0010758 (gene) of Chayote v1 genome

Gene IDSed0010758
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:39735472..39736636
RNA-Seq ExpressionSed0010758
SyntenySed0010758
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059465.1 hypothetical protein E6C27_scaffold242G001950 [Cucumis melo var. makuwa]1.2e-0763.49Show/hide
Query:  SKTIVFVALFIALMVVSS-RLTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS
        +  I  VA+FI LMVVSS  L  ITT+ AAR+AK DP  PMCPQCMCC++ PPG CC CC+NS
Subjt:  SKTIVFVALFIALMVVSS-RLTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS
TrEMBL top hitse value%identityAlignment
A0A0A0K9Q7 Uncharacterized protein6.9e-0960Show/hide
Query:  MGVQIRSKTIVFVALFIALMVVSSR--LTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS
        M +Q     + FVA+FI LMVVSS   L  ITT+ AAR+AK DP  PMCPQCMCC++ PPG CC CC+NS
Subjt:  MGVQIRSKTIVFVALFIALMVVSSR--LTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS
A0A5D3BXX8 Uncharacterized protein5.9e-0863.49Show/hide
Query:  SKTIVFVALFIALMVVSS-RLTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS
        +  I  VA+FI LMVVSS  L  ITT+ AAR+AK DP  PMCPQCMCC++ PPG CC CC+NS
Subjt:  SKTIVFVALFIALMVVSS-RLTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21351.1 unknown protein8.7e-0442.86Show/hide
Query:  TIVFVALFIALMVVSSRLTPITTTQAA-------RVAKQDPPIPMCPQCMCCTAAPPGGCCAC
        TI+   LF+AL+     L+P    QAA       ++    PPI MC QC CC  APPG CC C
Subjt:  TIVFVALFIALMVVSSRLTPITTTQAA-------RVAKQDPPIPMCPQCMCCTAAPPGGCCAC
AT3G21352.1 unknown protein3.0e-0440.68Show/hide
Query:  LFIALMVVSSRLTPITTTQAA---------RVAKQDPPIPMCPQCMCCTAAPPGGCCAC
        + + + V+S  L+PI   QAA         ++    PPI MCPQC+CC  APP  CC C
Subjt:  LFIALMVVSSRLTPITTTQAA---------RVAKQDPPIPMCPQCMCCTAAPPGGCCAC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTGCAAATTAGGTCTAAAACTATTGTTTTTGTTGCCCTTTTCATAGCTCTCATGGTGGTTTCTTCTCGTCTCACGCCCATTACTACCACCCAAGCAGCTCGTGT
AGCCAAACAAGATCCACCCATACCGATGTGCCCTCAATGCATGTGTTGCACTGCTGCACCGCCGGGCGGTTGTTGTGCGTGTTGCGCTAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAATGGGTGTGCAAATTAGGTCTAAAACTATTGTTTTTGTTGCCCTTTTCATAGCTCTCATGGTGGTTTCTTCTCGTCTCACGCCCATTACTACCACCCAAGCAGCTC
GTGTAGCCAAACAAGATCCACCCATACCGATGTGCCCTCAATGCATGTGTTGCACTGCTGCACCGCCGGGCGGTTGTTGTGCGTGTTGCGCTAATTCCTAAAGTGACAGG
CTCACATGTCTCTACATGAATCGAGATTATGATAATATTTTAAATCAATCAGACTAAAAATCTAGTTGATCTATCTATAATACTCTAATAAAAAGCTAGCTAGTTGCTCC
TACTTTCATTTGTGTGTGTTTATTTAATTACTGTCTGTTTTTTTTTTTGAAAAGTTTAATTACTGTCTGTTT
Protein sequenceShow/hide protein sequence
MGVQIRSKTIVFVALFIALMVVSSRLTPITTTQAARVAKQDPPIPMCPQCMCCTAAPPGGCCACCANS