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Sed0010782 (gene) of Chayote v1 genome

Gene IDSed0010782
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:40030553..40031304
RNA-Seq ExpressionSed0010782
SyntenySed0010782
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577526.1 hypothetical protein SDJN03_25100, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2476.14Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDHHHHSD
        MEI   VAKF+ H++AAL LSL LFSL L+ P+FLSLLA+FWPLLLSTALFLLAVLLF NTSLP P+KAAEGLLNYVAGH DHH  +D
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDHHHHSD

KAG6596766.1 hypothetical protein SDJN03_09946, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2275.61Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD
        MEI + V +F+ H +AALTL LTLFSL L+ PR LSL+AYFWPLLLSTALFLLAVLLFAN SLPPP+K  EGLLNYVAGH D
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD

KAG7028299.1 hypothetical protein SDJN02_09480, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2276.83Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD
        MEI + V KF+ H +AALTL LTLFSL L+ PR LSL+AYFWPLLLSTALFLLAVLLFAN SLPPP+K  EGLLNYVAGH D
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD

KGN56016.1 hypothetical protein Csa_010324 [Cucumis sativus]7.8e-2376.83Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD
        MEI + V KF+ H++  L LSLTLFSL L+ P FLSLLAYFWPL LSTALFLLAVLLFANTSLP P+KAAEGLL+YVAGHHD
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD

PON94035.1 hypothetical protein TorRG33x02_100740 [Trema orientale]4.1e-1656.84Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PEKAAEGLLNYVAG--------HHDHHHH
        MEI   + +FK H++ AL L + + +L L+ PRF+++LAYFWPLLLSTALFL AVL+F  TS PP  +KA EGLL+YVAG        HHDHHHH
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PEKAAEGLLNYVAG--------HHDHHHH

TrEMBL top hitse value%identityAlignment
A0A0A0L7E9 Uncharacterized protein3.8e-2376.83Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD
        MEI + V KF+ H++  L LSLTLFSL L+ P FLSLLAYFWPL LSTALFLLAVLLFANTSLP P+KAAEGLL+YVAGHHD
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHD

A0A2P5F8A8 Uncharacterized protein2.0e-1656.84Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PEKAAEGLLNYVAG--------HHDHHHH
        MEI   + +FK H++ AL L + + +L L+ PRF+++LAYFWPLLLSTALFL AVL+F  TS PP  +KA EGLL+YVAG        HHDHHHH
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PEKAAEGLLNYVAG--------HHDHHHH

A0A314XNV4 Uncharacterized protein5.8e-1660.24Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDH
        MEI   + KFK H + AL L LTL+++TLI PRFL++LAYFWPL LSTALFL AV++F  T+LP  E + EGLL+YVAG  +H
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDH

A0A5E4FSR9 PREDICTED: transmembrane5.8e-1660.24Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDH
        MEI   + KFK H + AL L LTL+++TLI PRFL++LAYFWPL LSTALFL AV++F  T+LP  E + EGLL+YVAG  +H
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDH

M5WI68 Uncharacterized protein5.8e-1660.24Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDH
        MEI   + KFK H + AL L LTL+++TLI PRFL++LAYFWPL LSTALFL AV++F  T+LP  E + EGLL+YVAG  +H
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein3.6e-1044.79Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEK------------AAEGLLNYVAG--HHD
        ME    + KFK+ ++ A  LSL   +L    P FL++L+YFWPL LSTALFL AV  FA TS  P               AAEG+L+YV G  H D
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEK------------AAEGLLNYVAG--HHD

AT4G16400.1 unknown protein2.2e-0735.23Show/hide
Query:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDHHHHSD
        MEI   + +++ H +  + +S+ + SL    PR L++LAYFWPL  STA FL   + F        E   E L++YVAG  +  H ++
Subjt:  MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDHHHHSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCTCAACCACGGTGGCGAAGTTCAAAATGCACATGATCGCAGCCCTAACCCTAAGCCTAACTCTCTTCTCCCTCACCCTCATCGGTCCCAGATTCCTGTCTCT
CCTCGCCTACTTCTGGCCTCTCCTCCTCTCCACCGCCCTCTTCCTCCTCGCCGTCCTCCTCTTCGCCAACACCTCTCTCCCCCCGCCGGAAAAAGCCGCCGAAGGCCTCC
TCAACTACGTCGCCGGCCACCACGACCACCACCACCACTCCGATTAG
mRNA sequenceShow/hide mRNA sequence
GTGCCTAAAAGAATGAAATGTATCACAAGAGAAAAAAGAAGGTTATATAAAAGAATATAATATTATAATTATTGAGTAAAGGAAAGGGGTAGCGGTGTAAATGATGAGTT
TAAAAAGGGTAAAAGAGATGATTGATAAGATTTTAATTTACCCATTTATCCCCTCCCCCAAACAAAACAAAACACTAACATTTTAGGCTTACCCTCTCAGAGAATCTCTG
CTGCTGCACTGAGAGAGAAAAAGAGAAGAAAGAATTTTCCATTACCATTCAAGCTTCCAAGTTCATCCATGGAGATCTCAACCACGGTGGCGAAGTTCAAAATGCACATG
ATCGCAGCCCTAACCCTAAGCCTAACTCTCTTCTCCCTCACCCTCATCGGTCCCAGATTCCTGTCTCTCCTCGCCTACTTCTGGCCTCTCCTCCTCTCCACCGCCCTCTT
CCTCCTCGCCGTCCTCCTCTTCGCCAACACCTCTCTCCCCCCGCCGGAAAAAGCCGCCGAAGGCCTCCTCAACTACGTCGCCGGCCACCACGACCACCACCACCACTCCG
ATTAGACCACGGTTCTTTCTCTTTACTTCTCACTTCCTTCTTCGTTCCATCCATATTATTTATGTACTCAATAACGCTTATCTAATGAAATCTCTCTTTCTCCGCGCCCA
TCTGACCCAGGATGCCTCTGCTCGTCTATTTCTCTTCAAATCGATTACTCGTAGTGTTTTTACATCGGATTTCATCCAAATTTGGTTTAAAT
Protein sequenceShow/hide protein sequence
MEISTTVAKFKMHMIAALTLSLTLFSLTLIGPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPEKAAEGLLNYVAGHHDHHHHSD