CuGenDBv2

Gene ID	Sed0010812
Organism	Sechium edule (Chayote v1)
Description	Large proline-rich protein bag6-B isoform X1
Genome location	LG13:26352216..26354561
RNA-Seq Expression	Sed0010812
Synteny	Sed0010812
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0071818 - BAT3 complex (cellular component) GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function) GO:0051787 - misfolded protein binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008452931.1 PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo]

4.0e-66

77.47

Show/hide

Query:  MNRFERA--ISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  IS NGG  P+ ELP NPQ LQ+PESL IVLRN Q+LLSDYAI SLP IAERFEQDGSSSDP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN
        ILTLRLEQS +DLQ+LAERV+STN  MDVFRAVVESSA++SGSS  DI + LC+ D+LAEEYL IL++DI RRLQS S+ E+
Subjt:  ILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN

XP_022940175.1 uncharacterized protein LOC111445881 isoform X1 [Cucurbita moschata]

4.0e-66

80.23

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Query:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG
        MNRFERAI    S NGG LP+ ELPANPQ LQTP+SL IVLRN Q LLS+YAI SLP IAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ
        SSILTL LEQS ID ++LA+R+ STNS MDVFRAVVESSAQVSG +NEDI  +LCS DTLAEEYLGILSNDI RRLQ
Subjt:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ

XP_023525662.1 uncharacterized protein LOC111789201 isoform X1 [Cucurbita pepo subsp. pepo]

1.5e-65

79.21

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Query:  MNRFERAISHN-----GGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDL
        MNRFERAIS N     GG LP+ ELP NPQ LQTP+SL IVLRN Q LLS+YAI SLP IAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDL
Subjt:  MNRFERAISHN-----GGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDL

Query:  GSSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ
        GSSILTL LEQS ID ++LA+R+ STNS MDVFRAVVESSAQVSG +NEDI  +LCS DTLAEEYLGILSNDI RRLQ
Subjt:  GSSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ

XP_023525663.1 uncharacterized protein LOC111789201 isoform X2 [Cucurbita pepo subsp. pepo]

1.2e-65

79.66

Show/hide

Query:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG
        MNRFERAI    S NGG LP+ ELP NPQ LQTP+SL IVLRN Q LLS+YAI SLP IAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ
        SSILTL LEQS ID ++LA+R+ STNS MDVFRAVVESSAQVSG +NEDI  +LCS DTLAEEYLGILSNDI RRLQ
Subjt:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ

XP_038899964.1 uncharacterized protein LOC120087140 isoform X1 [Benincasa hispida]

2.7e-70

79.44

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Query:  MNRFERAISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSSIL
        MNRFERAIS NGG LP+ ELP NPQ LQTPESLGIVLRN QRLLSDYAISSLP IAERFEQDGSS+DP VRGQIQEELVQ+GLRMQ FGALLLDLGSSIL
Subjt:  MNRFERAISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSSIL

Query:  TLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN
        TLRLEQS IDLQ+LA+RV+STN  MDVFRAVVESSA++SGSS +D+  +LC+D+TLAEEYL + ++DI RRLQS S+ EN
Subjt:  TLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BV17 uncharacterized protein LOC103493795 isoform X1

1.9e-66

77.47

Show/hide

Query:  MNRFERA--ISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  IS NGG  P+ ELP NPQ LQ+PESL IVLRN Q+LLSDYAI SLP IAERFEQDGSSSDP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN
        ILTLRLEQS +DLQ+LAERV+STN  MDVFRAVVESSA++SGSS  DI + LC+ D+LAEEYL IL++DI RRLQS S+ E+
Subjt:  ILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN

A0A5A7VE91 Large proline-rich protein bag6-B isoform X1

1.9e-66

77.47

Show/hide

Query:  MNRFERA--ISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  IS NGG  P+ ELP NPQ LQ+PESL IVLRN Q+LLSDYAI SLP IAERFEQDGSSSDP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN
        ILTLRLEQS +DLQ+LAERV+STN  MDVFRAVVESSA++SGSS  DI + LC+ D+LAEEYL IL++DI RRLQS S+ E+
Subjt:  ILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN

A0A6J1FHQ5 uncharacterized protein LOC111445881 isoform X2

7.3e-66

80.11

Show/hide

Query:  MNRFERAISHN---GGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGS
        MNRFERAIS N    G LP+ ELPANPQ LQTP+SL IVLRN Q LLS+YAI SLP IAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGS
Subjt:  MNRFERAISHN---GGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGS

Query:  SILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ
        SILTL LEQS ID ++LA+R+ STNS MDVFRAVVESSAQVSG +NEDI  +LCS DTLAEEYLGILSNDI RRLQ
Subjt:  SILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ

A0A6J1FPT9 uncharacterized protein LOC111445881 isoform X1

1.9e-66

80.23

Show/hide

Query:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG
        MNRFERAI    S NGG LP+ ELPANPQ LQTP+SL IVLRN Q LLS+YAI SLP IAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ
        SSILTL LEQS ID ++LA+R+ STNS MDVFRAVVESSAQVSG +NEDI  +LCS DTLAEEYLGILSNDI RRLQ
Subjt:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ

A0A6J1IWC0 uncharacterized protein LOC111481190 isoform X1

9.6e-66

79.1

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Query:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG
        MNRFERAI    S NGG+LP+ ELP NPQ LQTP+SL IVLRN Q LLSDYAI SLP IAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ
        SSILTL LEQS ID ++LA+R+ STNS MDVFRAVVESSAQVSG +NEDI  +LCS D LAEEYL ILSNDI RRLQ
Subjt:  SSILTLRLEQSKIDLQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQ

SwissProt top hits

e value

%identity

Alignment

D5LXJ0 Ubiquitin-like domain-containing protein CIP73

1.1e-07

35.23

Show/hide

Query:  LPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQS
        L + P+GL +P SL  VL +T+R++ + A   L  +A + E     +DP  R   Q   ++ G+   + GA LL+LG + +TLRL Q+
Subjt:  LPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQS

Arabidopsis top hits

e value

%identity

Alignment

AT5G42220.1 Ubiquitin-like superfamily protein

1.2e-28

58.12

Show/hide

Query:  MNRFERAISHNG----------GILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGA
        +NR E+A+S NG          G  P+ ELP N +G  TPE+L +VLRN Q LLS   +SSL HIA R EQDGSSSDP +R QIQ E VQVGL MQH GA
Subjt:  MNRFERAISHNG----------GILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGA

Query:  LLLDLGSSILTLRLEQS
        LLL+LG +ILTLR+  S
Subjt:  LLLDLGSSILTLRLEQS

Sequences

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CDS sequence

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ATGAATCGGTTCGAGCGTGCAATATCTCACAATGGTGGAATTCTACCAAAGTTGGAACTGCCCGCCAATCCCCAAGGTTTGCAAACTCCAGAATCTTTGGGTATAGTTTT
GCGAAATACACAACGACTTCTAAGTGATTATGCTATATCTTCACTACCTCACATTGCGGAGCGATTCGAGCAAGACGGGTCTTCAAGTGATCCGCAGGTGAGGGGCCAAA
TACAAGAAGAGTTGGTACAAGTAGGACTTAGGATGCAACACTTTGGAGCCCTTCTTCTGGATCTCGGCAGTTCAATCTTGACGCTCCGTTTGGAACAGTCAAAGATTGAC
CTCCAAAATCTGGCTGAAAGGGTTATATCTACCAATTCTCTTATGGATGTGTTCCGCGCTGTGGTTGAGAGCTCAGCTCAAGTTTCTGGCAGTAGTAATGAAGATATTAT
ACATGATTTGTGCAGCGATGACACACTTGCTGAGGAATATTTAGGGATATTATCAAATGATATTTGCCGACGATTGCAAAGCAAATCCGACGATGAAAATTAA

mRNA sequence

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Protein sequence

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MNRFERAISHNGGILPKLELPANPQGLQTPESLGIVLRNTQRLLSDYAISSLPHIAERFEQDGSSSDPQVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSKID
LQNLAERVISTNSLMDVFRAVVESSAQVSGSSNEDIIHDLCSDDTLAEEYLGILSNDICRRLQSKSDDEN

Sed0010812 (gene) of Chayote v1 genome