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Sed0010818 (gene) of Chayote v1 genome

Gene IDSed0010818
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG14:5635464..5636263
RNA-Seq ExpressionSed0010818
SyntenySed0010818
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48431.1 hypothetical protein EZV62_027725 [Acer yangbiense]1.1e-2132.86Show/hide
Query:  KKSAYCKL--LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKL
        KK A C    +++  S N ++FR L+ +IW +   VEIE    N++   F   +D+  +  GGP SFD  L+V E+  GK     L F    FWVH+  +
Subjt:  KKSAYCKL--LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKL

Query:  LSICLSSRWAKAIGNMIGEFLDVDM----------MRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG---A
          I ++    K +G++IGE  +VD+          MR+               +DV    E+    + Y +LP FCF CG +GH   +C S  E G    
Subjt:  LSICLSSRWAKAIGNMIGEFLDVDM----------MRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG---A

Query:  GSLVYGGWLRAEA
          +VYG WLRA A
Subjt:  GSLVYGGWLRAEA

TXG54012.1 hypothetical protein EZV62_019268 [Acer yangbiense]1.6e-2232.67Show/hide
Query:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA
        +++N++ N ++F R++ KIW +    EIES   N+F  HF   ED+  ++ GGP SFDN L+V E   GK   E + F  A FWV + ++  +C++ +  
Subjt:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA

Query:  KAIGNMIGEFLDVD----------MMRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEK----GAGSLVYGGWL
          +G +IGE L+VD           MR+               +D+     +    L Y +LP  CF CG + H T +C+S E +    G   L +G WL
Subjt:  KAIGNMIGEFLDVD----------MMRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEK----GAGSLVYGGWL

Query:  RA
        RA
Subjt:  RA

TXG57544.1 hypothetical protein EZV62_015373 [Acer yangbiense]4.7e-2232.29Show/hide
Query:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA
        +I N+  N+  FR +  KIW    RVEIE+   N+F   F + ED+  IL GGP +FD  L+V E   GK   +++SF +A FWV + ++  +C++    
Subjt:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA

Query:  KAIGNMIGEFLDVDM----------MRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVE----EKGAGSLVYGGWL
        + +G+M+G   DVD+          +R+               +DV    E+    L   +LP  CF CGR+GH  ++C        E GA  L +G WL
Subjt:  KAIGNMIGEFLDVDM----------MRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVE----EKGAGSLVYGGWL

Query:  RAEASNPGVRSSLN-QGKEGATR
        R  A     R   N Q   G+ R
Subjt:  RAEASNPGVRSSLN-QGKEGATR

TXG71386.1 hypothetical protein EZV62_006321 [Acer yangbiense]7.3e-2331.71Show/hide
Query:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA
        ++  +  N ++F R++ KIW +   VEI+S   N+F  HF   EDK  +L G P +FDN L+V E++ G+   ++L+F    FWV + ++  IC S    
Subjt:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA

Query:  KAIGNMIGEFLDVD----------MMRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEE----KGAGSLVYGGWL
        + +G MI E ++VD           MR+               +D+     +    L Y KLP  CF CGRI H T +C S E+     G   L +G W+
Subjt:  KAIGNMIGEFLDVD----------MMRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEE----KGAGSLVYGGWL

Query:  RAEAS
        +A+ +
Subjt:  RAEAS

TXG71930.1 hypothetical protein EZV62_000509 [Acer yangbiense]1.4e-2134.65Show/hide
Query:  KDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKK
        KD+ +    K +I+ +  N ++F+ L+ +IW    +VE+ES G NLF  +F   ED+  +L+ GP  F N L+V E S  +    +L F    FWV +  
Subjt:  KDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKK

Query:  LLSICLSSRWAKAIGNMIGEFLDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG---AGSLV-YGGWLRAEASNPGVRSSLN
        +L +C++ R AK +   IGE +++            E     L Y KLP+FC+ CGRIGHG K+C   E +     G L  +G WL+A A N       +
Subjt:  LLSICLSSRWAKAIGNMIGEFLDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG---AGSLV-YGGWLRAEASNPGVRSSLN

Query:  QG
        QG
Subjt:  QG

TrEMBL top hitse value%identityAlignment
A0A5C7GZQ4 CCHC-type domain-containing protein4.3e-2131.34Show/hide
Query:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA
        L++ +  N ++F  ++P+IW      EIE    N+F   F E  D+ ++L GGP SFD  L+V E+  GK    E+ F    FW+ + K+  +C++S   
Subjt:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA

Query:  KAIGNMIGEFLDVD-------------------------MMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVE---EKGAGSLVYGGWLR
        + +G+MIGE  ++D                          M  +DV    ++    L Y +LP+ C+ CGRIGH  +DC  V    E    +L++G WLR
Subjt:  KAIGNMIGEFLDVD-------------------------MMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVE---EKGAGSLVYGGWLR

Query:  A
        A
Subjt:  A

A0A5C7HK10 CCHC-type domain-containing protein1.9e-2133.96Show/hide
Query:  MRITEEERACRVEIGDDDVEEADKDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFED
        + I +E+ A   E+ ++D  E   ++      K +I+ + +N ++F+ L+ K+W    RVEIES G N+F  HF   E++  I   GP  FDN L+  E 
Subjt:  MRITEEERACRVEIGDDDVEEADKDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFED

Query:  SYGKALPEELSFKFACFWVHVKKLLSICLSSRWAKAIGNMIGEF-LDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG----
          G      L F     W+ +  +  +C++ + AK + N IG   L +D    I + S        L Y +LPEFC+ CGRIGHG+KDC   E K     
Subjt:  SYGKALPEELSFKFACFWVHVKKLLSICLSSRWAKAIGNMIGEF-LDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG----

Query:  AGSLVYGGWLRA
        + S  YG W+RA
Subjt:  AGSLVYGGWLRA

A0A5C7HKY9 CCHC-type domain-containing protein2.3e-2232.29Show/hide
Query:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA
        +I N+  N+  FR +  KIW    RVEIE+   N+F   F + ED+  IL GGP +FD  L+V E   GK   +++SF +A FWV + ++  +C++    
Subjt:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA

Query:  KAIGNMIGEFLDVDM----------MRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVE----EKGAGSLVYGGWL
        + +G+M+G   DVD+          +R+               +DV    E+    L   +LP  CF CGR+GH  ++C        E GA  L +G WL
Subjt:  KAIGNMIGEFLDVDM----------MRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVE----EKGAGSLVYGGWL

Query:  RAEASNPGVRSSLN-QGKEGATR
        R  A     R   N Q   G+ R
Subjt:  RAEASNPGVRSSLN-QGKEGATR

A0A5C7IRI6 CCHC-type domain-containing protein6.7e-2234.65Show/hide
Query:  KDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKK
        KD+ +    K +I+ +  N ++F+ L+ +IW    +VE+ES G NLF  +F   ED+  +L+ GP  F N L+V E S  +    +L F    FWV +  
Subjt:  KDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKK

Query:  LLSICLSSRWAKAIGNMIGEFLDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG---AGSLV-YGGWLRAEASNPGVRSSLN
        +L +C++ R AK +   IGE +++            E     L Y KLP+FC+ CGRIGHG K+C   E +     G L  +G WL+A A N       +
Subjt:  LLSICLSSRWAKAIGNMIGEFLDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKG---AGSLV-YGGWLRAEASNPGVRSSLN

Query:  QG
        QG
Subjt:  QG

A0A5C7ISC9 Uncharacterized protein3.5e-2331.71Show/hide
Query:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA
        ++  +  N ++F R++ KIW +   VEI+S   N+F  HF   EDK  +L G P +FDN L+V E++ G+   ++L+F    FWV + ++  IC S    
Subjt:  LINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGP-SFDNGLVVFEDSYGKALPEELSFKFACFWVHVKKLLSICLSSRWA

Query:  KAIGNMIGEFLDVD----------MMRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEE----KGAGSLVYGGWL
        + +G MI E ++VD           MR+               +D+     +    L Y KLP  CF CGRI H T +C S E+     G   L +G W+
Subjt:  KAIGNMIGEFLDVD----------MMRI---------------IDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEE----KGAGSLVYGGWL

Query:  RAEAS
        +A+ +
Subjt:  RAEAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATTACAGAGGAAGAAAGGGCATGTCGTGTGGAGATTGGGGATGACGATGTAGAGGAGGCAGACAAAGATCTTAAAAAATCGGCCTACTGTAAGTTGTTAATTAA
TAATAGGTCCTCCAATGCAGATTCATTCAGAAGATTAATGCCAAAAATTTGGGGCTTGGGCCACAGAGTGGAAATTGAGTCGCAGGGGAGGAATTTGTTTCAATGCCACT
TTGTGGAGTTAGAGGACAAAATAAATATTTTGGAAGGGGGTCCGAGTTTTGATAATGGTCTGGTAGTGTTTGAAGATTCATATGGGAAGGCTCTTCCAGAAGAATTAAGT
TTCAAATTCGCGTGCTTCTGGGTCCATGTGAAGAAACTTCTGTCTATTTGCCTCTCAAGTAGGTGGGCGAAAGCGATTGGGAACATGATTGGGGAGTTTTTAGATGTCGA
TATGATGAGAATAATAGATGTGGGTTCCATGGCAGAGGACCGCTGGTTCTGTCTAGCGTATGGAAAGCTACCAGAGTTTTGTTTTGGCTGTGGTAGAATCGGTCATGGTA
CTAAAGATTGCAAATCAGTGGAGGAAAAAGGGGCGGGTTCTCTAGTTTACGGTGGTTGGTTGAGAGCTGAGGCTAGCAATCCAGGAGTTCGAAGTTCATTGAATCAGGGA
AAGGAAGGAGCAACTCGGAACAAGGAGGATTCTAAGAGGGAGAAAGAAAGATCTGAGAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATTACAGAGGAAGAAAGGGCATGTCGTGTGGAGATTGGGGATGACGATGTAGAGGAGGCAGACAAAGATCTTAAAAAATCGGCCTACTGTAAGTTGTTAATTAA
TAATAGGTCCTCCAATGCAGATTCATTCAGAAGATTAATGCCAAAAATTTGGGGCTTGGGCCACAGAGTGGAAATTGAGTCGCAGGGGAGGAATTTGTTTCAATGCCACT
TTGTGGAGTTAGAGGACAAAATAAATATTTTGGAAGGGGGTCCGAGTTTTGATAATGGTCTGGTAGTGTTTGAAGATTCATATGGGAAGGCTCTTCCAGAAGAATTAAGT
TTCAAATTCGCGTGCTTCTGGGTCCATGTGAAGAAACTTCTGTCTATTTGCCTCTCAAGTAGGTGGGCGAAAGCGATTGGGAACATGATTGGGGAGTTTTTAGATGTCGA
TATGATGAGAATAATAGATGTGGGTTCCATGGCAGAGGACCGCTGGTTCTGTCTAGCGTATGGAAAGCTACCAGAGTTTTGTTTTGGCTGTGGTAGAATCGGTCATGGTA
CTAAAGATTGCAAATCAGTGGAGGAAAAAGGGGCGGGTTCTCTAGTTTACGGTGGTTGGTTGAGAGCTGAGGCTAGCAATCCAGGAGTTCGAAGTTCATTGAATCAGGGA
AAGGAAGGAGCAACTCGGAACAAGGAGGATTCTAAGAGGGAGAAAGAAAGATCTGAGAGAAGATGA
Protein sequenceShow/hide protein sequence
MRITEEERACRVEIGDDDVEEADKDLKKSAYCKLLINNRSSNADSFRRLMPKIWGLGHRVEIESQGRNLFQCHFVELEDKINILEGGPSFDNGLVVFEDSYGKALPEELS
FKFACFWVHVKKLLSICLSSRWAKAIGNMIGEFLDVDMMRIIDVGSMAEDRWFCLAYGKLPEFCFGCGRIGHGTKDCKSVEEKGAGSLVYGGWLRAEASNPGVRSSLNQG
KEGATRNKEDSKREKERSERR