; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010828 (gene) of Chayote v1 genome

Gene IDSed0010828
OrganismSechium edule (Chayote v1)
DescriptionVQ domain-containing protein
Genome locationLG03:2788276..2788773
RNA-Seq ExpressionSed0010828
SyntenySed0010828
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058915.1 protein MKS1-like [Cucumis melo var. makuwa]6.1e-4561.67Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPN------HRQAPSETTSMSMSSSAIIE
        M E+KE+QLQGPRPSALKI KDSHKIKKPPLPPP  HRPVIIYTVSPKIIHT+PT+FKDLVQRLTGH +P   +      H   P +  S+ + + AI +
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPN------HRQAPSETTSMSMSSSAIIE

Query:  Q--GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH
        Q  GV+R+     GILSPTPGLLPPISP IF+  P         DL+ LT+FF DLSPI  ++FSPSLD F +NFPD FH
Subjt:  Q--GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH

KAG6578908.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4567.68Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV
        MAERKE+QLQGPRP+ALKI KDSHKI KPP      HRPVIIYTVSPK+IHT+PT+FKDLVQRLTGH+     +H   P  TT M MS++    QG ERV
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV

Query:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD
        GH   GILSPTPGLLPPI  NIFT +P  +A+LSPLT FF+DLSPI P+ FS SLD FF+NFPD
Subjt:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD

XP_022939148.1 protein MKS1-like [Cucurbita moschata]2.7e-4567.68Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV
        MAERKE+QLQGPRP+ALKI KDSHKI KPP      HRPVIIYTVSPK+IHT+PT+FKDLVQRLTGH+     +H   P  TT M MS++    QG ERV
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV

Query:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD
        GH   GILSPTPGLLPPI  NIFT +P  +A+LSPLT FF+DLSPI P+ FS SLD FF+NFPD
Subjt:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD

XP_023551504.1 protein MKS1-like [Cucurbita pepo subsp. pepo]2.5e-4667.68Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV
        MAERKEVQLQGPRP+ALKI KDSHKI KPP      HRPVIIYTVSPK+IHT+PT+FKDLVQRLTGH+     +H    S  T+M MS++    QG ERV
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV

Query:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD
        GH   GILSPTPGLLPPI  NIFT +P  +A+LSPLT FF+DLSPI P+ FS SLD FF+NFPD
Subjt:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD

XP_038885910.1 protein MKS1-like [Benincasa hispida]5.3e-4970.29Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPP--PPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMS-SSAIIEQGV
        M ERKEV LQGPRP+ALKI KDSHKIKKPPLPP  PP HRPVIIYTVSPKIIHTEPTEFKDLVQRLTG  RP   N   A    TSMSMS ++  I+QGV
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPP--PPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMS-SSAIIEQGV

Query:  ERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH
        ERVGH   GILSPTPGLLPPIS NIFT  P       A D SP T+FFQD SPI  ++FS SLD F +NFPD FH
Subjt:  ERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein1.5e-4461.11Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQA-------PSETTSMSMSSSAII
        M E+KE+QLQGPRPSALKI KDSHKIKKPPLPPP  HRPVIIYTVSPKIIHT+PTEFKDLVQRLTGH +P   +   A       P +  S+  +   I 
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQA-------PSETTSMSMSSSAII

Query:  EQ-GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH
        +Q GV+R+     GILSPTPGLLPPIS  IF   P       A DL+ LT+FF DLSPI  ++FS SLD F +NFPD FH
Subjt:  EQ-GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH

A0A1S3B4N1 protein MKS1-like1.6e-4360.11Show/hide
Query:  ERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPN------HRQAPSETTSMSMSSSAIIEQ-
        +++++QLQGPRPSALKI KDSHKIKKPPLPPP  HRPVIIYTVSPKIIHT+PT+FKDLVQRLTGH +P   +      H   P +  S+ + + AI +Q 
Subjt:  ERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPN------HRQAPSETTSMSMSSSAIIEQ-

Query:  -GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH
         GV+R+     GILSPTPGLLPPISP IF+  P         DL+ LT+FF DLSPI  ++FSPSLD F +NFPD FH
Subjt:  -GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH

A0A5A7UZA1 Protein MKS1-like2.9e-4561.67Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPN------HRQAPSETTSMSMSSSAIIE
        M E+KE+QLQGPRPSALKI KDSHKIKKPPLPPP  HRPVIIYTVSPKIIHT+PT+FKDLVQRLTGH +P   +      H   P +  S+ + + AI +
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPN------HRQAPSETTSMSMSSSAIIE

Query:  Q--GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH
        Q  GV+R+     GILSPTPGLLPPISP IF+  P         DL+ LT+FF DLSPI  ++FSPSLD F +NFPD FH
Subjt:  Q--GVERVGHFPPGILSPTPGLLPPISPNIFTHSP-------AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH

A0A6J1FKV1 protein MKS1-like1.3e-4567.68Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV
        MAERKE+QLQGPRP+ALKI KDSHKI KPP      HRPVIIYTVSPK+IHT+PT+FKDLVQRLTGH+     +H   P  TT M MS++    QG ERV
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV

Query:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD
        GH   GILSPTPGLLPPI  NIFT +P  +A+LSPLT FF+DLSPI P+ FS SLD FF+NFPD
Subjt:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD

A0A6J1JW33 protein MKS1-like8.5e-4567.07Show/hide
Query:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV
        MAERKEVQLQGPRP+ALKI KDSHKI KPP      HRPVIIY+VSPK+IHT+PT+FKDLVQRLTGH+     +H   P  TT M MS++     G ERV
Subjt:  MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERV

Query:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD
        GH   GILSPTPGLLPPI  NIFT +P  +A+LSPLT FF+DLSPI P+ FS SLD FF+NFPD
Subjt:  GHFPPGILSPTPGLLPPISPNIFTHSP--AADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPD

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B2.7e-1141.18Show/hide
Query:  GPRPSALKINKDSHK-IKKPPLPPP------------------PHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSA
        GP+P+ LK+  DSHK IKKPPL PP                  P   PV IYTV+P+IIHT P  F  LVQRLTG          Q  + TTS S SSS 
Subjt:  GPRPSALKINKDSHK-IKKPPLPPP------------------PHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSA

Query:  IIEQGVERVGHFPPGILSP
           +    +     G++SP
Subjt:  IIEQGVERVGHFPPGILSP

Q8LGD5 Protein MKS19.5e-1735.83Show/hide
Query:  ERKEVQLQGPRPSALKINKDSHKIKKPPL-PPPPHHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTG-------------------------
        +++++Q+ GPRPS L ++KDSHKIKKPP  P PP +R          PV+IY VSPK++H   +EF ++VQRLTG                         
Subjt:  ERKEVQLQGPRPSALKINKDSHKIKKPPL-PPPPHHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTG-------------------------

Query:  HRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERVGHFPPGILSPTPGLLPPISPNIFTHSPAADLSPLTRFFQDLSPIVPSN-FSPS
        +  P G     A  ET  ++ +    +E+  E  G + PGILSP+P LLP  S  IF        SP+       SP +P   FSP+
Subjt:  HRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERVGHFPPGILSPTPGLLPPISPNIFTHSPAADLSPLTRFFQDLSPIVPSN-FSPS

Q9CA36 VQ motif-containing protein 8, chloroplastic3.1e-0753.12Show/hide
Query:  QLQGPRPSALKINKDSHKIKKP---PLPPPPHHR--PVIIYTVSPKIIHTEPTEFKDLVQRLTG
        ++ G RPS+LK+  +SH IKK       P PH R  PVIIY  SPK+IHT   +F  LVQRLTG
Subjt:  QLQGPRPSALKINKDSHKIKKP---PLPPPPHHR--PVIIYTVSPKIIHTEPTEFKDLVQRLTG

Q9LS54 VQ motif-containing protein 201.1e-0947.19Show/hide
Query:  PRPSALKINKDSHKIKKPPLP------PPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPD----GPNHRQAPSETTSMSMSSS
        P P  LK+NKDSH IKKPP P        P H PVIIYT +P+IIHT P +F  LVQ+LTG    D    G N    P    S++ + S
Subjt:  PRPSALKINKDSHKIKKPPLP------PPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPD----GPNHRQAPSETTSMSMSSS

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.9e-1241.18Show/hide
Query:  GPRPSALKINKDSHK-IKKPPLPPP------------------PHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSA
        GP+P+ LK+  DSHK IKKPPL PP                  P   PV IYTV+P+IIHT P  F  LVQRLTG          Q  + TTS S SSS 
Subjt:  GPRPSALKINKDSHK-IKKPPLPPP------------------PHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSA

Query:  IIEQGVERVGHFPPGILSP
           +    +     G++SP
Subjt:  IIEQGVERVGHFPPGILSP

AT1G21326.1 VQ motif-containing protein2.2e-1632.6Show/hide
Query:  GPRPSALKINKDSHK-IKKPPLPPP------------------PHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDG-----PNHRQAPSETTSMS
        GPRP  LK+  DSHK IKKPPL PP                  P   PVIIYTVSP+IIHT P  F  LVQRLTG            +   AP + ++M 
Subjt:  GPRPSALKINKDSHK-IKKPPLPPP------------------PHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDG-----PNHRQAPSETTSMS

Query:  MSSSAII----------------------------------------------EQGVERVGHFPPGILSPTPGLLPPISPNIFTHSPAADLSPLTRFFQD
         +S  +I                                               QG ER      GILSP P  LP +SP+ F+     D    + FF D
Subjt:  MSSSAII----------------------------------------------EQGVERVGHFPPGILSPTPGLLPPISPNIFTHSPAADLSPLTRFFQD

Query:  LSPIVPSN----FSPSLDNFFRNFPDN
         + I+ S+     SPS  + F NF D+
Subjt:  LSPIVPSN----FSPSLDNFFRNFPDN

AT1G68450.1 VQ motif-containing protein2.2e-0853.12Show/hide
Query:  QLQGPRPSALKINKDSHKIKKP---PLPPPPHHR--PVIIYTVSPKIIHTEPTEFKDLVQRLTG
        ++ G RPS+LK+  +SH IKK       P PH R  PVIIY  SPK+IHT   +F  LVQRLTG
Subjt:  QLQGPRPSALKINKDSHKIKKP---PLPPPPHHR--PVIIYTVSPKIIHTEPTEFKDLVQRLTG

AT3G18360.1 VQ motif-containing protein8.0e-1147.19Show/hide
Query:  PRPSALKINKDSHKIKKPPLP------PPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPD----GPNHRQAPSETTSMSMSSS
        P P  LK+NKDSH IKKPP P        P H PVIIYT +P+IIHT P +F  LVQ+LTG    D    G N    P    S++ + S
Subjt:  PRPSALKINKDSHKIKKPPLP------PPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPD----GPNHRQAPSETTSMSMSSS

AT3G18690.1 MAP kinase substrate 16.7e-1835.83Show/hide
Query:  ERKEVQLQGPRPSALKINKDSHKIKKPPL-PPPPHHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTG-------------------------
        +++++Q+ GPRPS L ++KDSHKIKKPP  P PP +R          PV+IY VSPK++H   +EF ++VQRLTG                         
Subjt:  ERKEVQLQGPRPSALKINKDSHKIKKPPL-PPPPHHR----------PVIIYTVSPKIIHTEPTEFKDLVQRLTG-------------------------

Query:  HRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERVGHFPPGILSPTPGLLPPISPNIFTHSPAADLSPLTRFFQDLSPIVPSN-FSPS
        +  P G     A  ET  ++ +    +E+  E  G + PGILSP+P LLP  S  IF        SP+       SP +P   FSP+
Subjt:  HRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERVGHFPPGILSPTPGLLPPISPNIFTHSPAADLSPLTRFFQDLSPIVPSN-FSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGCCCCCGCCCCTCCGCCCTAAAAATCAACAAAGACTCTCACAAGATAAAAAAGCCGCCTCTCCCGCCCCCACCGCACCA
CCGCCCCGTCATAATCTACACCGTCTCCCCCAAGATCATCCACACGGAGCCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGGCATCGTCGACCCGATGGCCCCA
ACCATCGTCAAGCTCCATCAGAGACCACGTCGATGTCGATGAGTAGTAGTGCTATAATAGAGCAAGGAGTGGAGAGGGTTGGTCATTTTCCACCGGGGATATTATCGCCG
ACCCCGGGGTTGCTACCGCCGATTTCGCCGAATATTTTCACTCACTCGCCTGCCGCGGATCTCAGCCCTCTCACCCGCTTCTTCCAAGACCTTAGTCCTATAGTTCCCAG
TAATTTTTCACCATCGCTAGATAATTTCTTCCGTAACTTCCCTGATAATTTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAGAAAAGAGGTTCAACTCCAAGGCCCCCGCCCCTCCGCCCTAAAAATCAACAAAGACTCTCACAAGATAAAAAAGCCGCCTCTCCCGCCCCCACCGCACCA
CCGCCCCGTCATAATCTACACCGTCTCCCCCAAGATCATCCACACGGAGCCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGGCATCGTCGACCCGATGGCCCCA
ACCATCGTCAAGCTCCATCAGAGACCACGTCGATGTCGATGAGTAGTAGTGCTATAATAGAGCAAGGAGTGGAGAGGGTTGGTCATTTTCCACCGGGGATATTATCGCCG
ACCCCGGGGTTGCTACCGCCGATTTCGCCGAATATTTTCACTCACTCGCCTGCCGCGGATCTCAGCCCTCTCACCCGCTTCTTCCAAGACCTTAGTCCTATAGTTCCCAG
TAATTTTTCACCATCGCTAGATAATTTCTTCCGTAACTTCCCTGATAATTTCCATTAA
Protein sequenceShow/hide protein sequence
MAERKEVQLQGPRPSALKINKDSHKIKKPPLPPPPHHRPVIIYTVSPKIIHTEPTEFKDLVQRLTGHRRPDGPNHRQAPSETTSMSMSSSAIIEQGVERVGHFPPGILSP
TPGLLPPISPNIFTHSPAADLSPLTRFFQDLSPIVPSNFSPSLDNFFRNFPDNFH