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Sed0010839 (gene) of Chayote v1 genome

Gene IDSed0010839
OrganismSechium edule (Chayote v1)
DescriptionTranscription factor GTE9 isoform X4
Genome locationLG03:14899532..14900227
RNA-Seq ExpressionSed0010839
SyntenySed0010839
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]1.6e-0637.84Show/hide
Query:  NLSSAPPPSLART-----------ARETMLLSKYASLI-SKSENQLFGKIESKECVVEKKP-SIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNW
        N+    PP+LA T            RE +   K  +   +K+ N+   K+  +       P S EE RKAAR ALE++E+SV+I+D+ K++KD+++LC W
Subjt:  NLSSAPPPSLART-----------ARETMLLSKYASLI-SKSENQLFGKIESKECVVEKKP-SIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNW

Query:  PIQFVGGFETR
        PI +VGGF+ R
Subjt:  PIQFVGGFETR
TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein2.9e-0655.1Show/hide
Query:  SIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNWPIQFVGGFETR
        S EE R+AAR+ALE +E+SV+++D+ K++KD+++LC WPI  VGGF+ R
Subjt:  SIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNWPIQFVGGFETR
A0A5D3DC97 Transcription factor GTE9 isoform X47.6e-0737.84Show/hide
Query:  NLSSAPPPSLART-----------ARETMLLSKYASLI-SKSENQLFGKIESKECVVEKKP-SIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNW
        N+    PP+LA T            RE +   K  +   +K+ N+   K+  +       P S EE RKAAR ALE++E+SV+I+D+ K++KD+++LC W
Subjt:  NLSSAPPPSLART-----------ARETMLLSKYASLI-SKSENQLFGKIESKECVVEKKP-SIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNW

Query:  PIQFVGGFETR
        PI +VGGF+ R
Subjt:  PIQFVGGFETR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCAGTGACGACTACTACCAATTACCCTCATCGAGTTTACGGCGCAGACTTACCACCCAAGGCAACGATAACGAAGCCAAGAACGAAACGTCATCGAGTTAGCAG
CAGCGATGATTTGAATTTGGCAGTGAAGACATCTAAGAGGACATCGAGTCCATTTAACGACAACCATGACTACCGCAACTTACCCTCGTCGAGTAGCAAAATGAAACCAG
CGACGACTACTACAAATAACCCTCGTCGAGGTTATTGTGCAGACTTACTACCCAAGGCAACGATAACGAAGCCAAGAACGAAACGTCGTCGAGTTAGCAGCAGCGATGAT
TTGAATTTGGCAATGAAGACATCTAAGAGGACATCGAGTTCACCTAATGACAACCATGTCAATCTTTCTTCGGCACCGCCGCCTTCATTGGCTAGAACGGCTCGAGAAAC
AATGTTGTTAAGCAAGTATGCAAGTTTGATATCGAAATCTGAGAATCAGCTTTTTGGGAAAATTGAATCAAAAGAATGTGTTGTGGAGAAGAAACCTAGCATTGAAGAAA
AGAGAAAAGCTGCTCGAGAAGCTTTAGAAAAAGTGGAGCAAAGTGTTGAGATAGATGATAACTGGAAAACCATGAAGGATATGCAAAAACTTTGTAATTGGCCCATACAA
TTTGTTGGTGGTTTTGAAACAAGATGCATTATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACCAGTGACGACTACTACCAATTACCCTCATCGAGTTTACGGCGCAGACTTACCACCCAAGGCAACGATAACGAAGCCAAGAACGAAACGTCATCGAGTTAGCAG
CAGCGATGATTTGAATTTGGCAGTGAAGACATCTAAGAGGACATCGAGTCCATTTAACGACAACCATGACTACCGCAACTTACCCTCGTCGAGTAGCAAAATGAAACCAG
CGACGACTACTACAAATAACCCTCGTCGAGGTTATTGTGCAGACTTACTACCCAAGGCAACGATAACGAAGCCAAGAACGAAACGTCGTCGAGTTAGCAGCAGCGATGAT
TTGAATTTGGCAATGAAGACATCTAAGAGGACATCGAGTTCACCTAATGACAACCATGTCAATCTTTCTTCGGCACCGCCGCCTTCATTGGCTAGAACGGCTCGAGAAAC
AATGTTGTTAAGCAAGTATGCAAGTTTGATATCGAAATCTGAGAATCAGCTTTTTGGGAAAATTGAATCAAAAGAATGTGTTGTGGAGAAGAAACCTAGCATTGAAGAAA
AGAGAAAAGCTGCTCGAGAAGCTTTAGAAAAAGTGGAGCAAAGTGTTGAGATAGATGATAACTGGAAAACCATGAAGGATATGCAAAAACTTTGTAATTGGCCCATACAA
TTTGTTGGTGGTTTTGAAACAAGATGCATTATCTAG
Protein sequenceShow/hide protein sequence
MKPVTTTTNYPHRVYGADLPPKATITKPRTKRHRVSSSDDLNLAVKTSKRTSSPFNDNHDYRNLPSSSSKMKPATTTTNNPRRGYCADLLPKATITKPRTKRRRVSSSDD
LNLAMKTSKRTSSSPNDNHVNLSSAPPPSLARTARETMLLSKYASLISKSENQLFGKIESKECVVEKKPSIEEKRKAAREALEKVEQSVEIDDNWKTMKDMQKLCNWPIQ
FVGGFETRCII