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Sed0010879 (gene) of Chayote v1 genome

Gene IDSed0010879
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein 6-like isoform X2
Genome locationLG04:6898457..6898713
RNA-Seq ExpressionSed0010879
SyntenySed0010879
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148757.1 late embryogenesis abundant protein 6 [Cucumis sativus]1.1e-1467.9Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGA-NVPAYPIAS
        +EK+SVKTAE RKI++E+RKA  AEAKRELHEAKARH A KLR+RKSH          P+ GGAATHL GA NVPAYPI S
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGA-NVPAYPIAS

XP_008448704.1 PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo]8.7e-1568.29Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS----------HPPVLGGAATHLAG-ANVPAYPIAS
        +EK+SVKTAE RKI++E+RKA  AEAKRELHEAKARH A KLR+RKS          H PV GGAATHL G  NVPAYPIAS
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS----------HPPVLGGAATHLAG-ANVPAYPIAS

XP_022145338.1 late embryogenesis abundant protein 18 [Momordica charantia]1.1e-1468.75Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRK-SHP-------PVLGGAATHLAGANVPAYPIASQ
        ++KS+ KTAE ++I+KE+RKA EAEAKRELHEAKARH A KL SRK SH        PV GGAATHLAGANVPAYP+ SQ
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRK-SHP-------PVLGGAATHLAGANVPAYPIASQ

XP_023553167.1 late embryogenesis abundant protein 6-like [Cucurbita pepo subsp. pepo]1.8e-1265Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGANVPAYPIAS
        ++K+SVKTAE RKI +E+RKA EAEAKRELHEAKARH A KLR+R+SH         PPV GG+A     ANVPAYPIAS
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGANVPAYPIAS

XP_038906206.1 late embryogenesis abundant protein 6-like [Benincasa hispida]4.0e-1264.56Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS---------HPPVLGGAATHLAGANVP-AYPI
        +EK+SVKT E RKI +E+RKA  AEAKRELHEAKARH A KLRS+KS         HPP+ G AAT+L  ANVP AYPI
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS---------HPPVLGGAATHLAGANVP-AYPI

TrEMBL top hitse value%identityAlignment
A0A0A0L1A9 Uncharacterized protein5.5e-1567.9Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGA-NVPAYPIAS
        +EK+SVKTAE RKI++E+RKA  AEAKRELHEAKARH A KLR+RKSH          P+ GGAATHL GA NVPAYPI S
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGA-NVPAYPIAS

A0A1S3BKB4 uncharacterized protein LOC1034907954.2e-1568.29Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS----------HPPVLGGAATHLAG-ANVPAYPIAS
        +EK+SVKTAE RKI++E+RKA  AEAKRELHEAKARH A KLR+RKS          H PV GGAATHL G  NVPAYPIAS
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS----------HPPVLGGAATHLAG-ANVPAYPIAS

A0A5D3CHS9 Seed maturation protein4.2e-1568.29Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS----------HPPVLGGAATHLAG-ANVPAYPIAS
        +EK+SVKTAE RKI++E+RKA  AEAKRELHEAKARH A KLR+RKS          H PV GGAATHL G  NVPAYPIAS
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKS----------HPPVLGGAATHLAG-ANVPAYPIAS

A0A6J1CVP3 late embryogenesis abundant protein 185.5e-1568.75Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRK-SHP-------PVLGGAATHLAGANVPAYPIASQ
        ++KS+ KTAE ++I+KE+RKA EAEAKRELHEAKARH A KL SRK SH        PV GGAATHLAGANVPAYP+ SQ
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRK-SHP-------PVLGGAATHLAGANVPAYPIASQ

A0A6J1E5Y8 late embryogenesis abundant protein 6-like isoform X22.5e-1263.75Show/hide
Query:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGANVPAYPIAS
        ++K+S KTAE RKI +E+RKA EAEAKRELHEAKARH A KLR+R+SH         PPV GG+A     ANVPAYPIAS
Subjt:  MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSH---------PPVLGGAATHLAGANVPAYPIAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCGTCGGTGAAAACCGCAGAAGGAAGGAAGATTTTGAAGGAGAAGAGGAAGGCGGTAGAGGCCGAGGCAAAGAGAGAGCTGCATGAGGCCAAAGCCAGACA
TGTAGCTCATAAGCTAAGGTCTAGGAAGTCACATCCTCCGGTTCTGGGCGGCGCCGCCACTCACCTCGCAGGAGCAAATGTTCCGGCTTACCCTATAGCCAGCCAAAATT
TAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATCGTCGGTGAAAACCGCAGAAGGAAGGAAGATTTTGAAGGAGAAGAGGAAGGCGGTAGAGGCCGAGGCAAAGAGAGAGCTGCATGAGGCCAAAGCCAGACA
TGTAGCTCATAAGCTAAGGTCTAGGAAGTCACATCCTCCGGTTCTGGGCGGCGCCGCCACTCACCTCGCAGGAGCAAATGTTCCGGCTTACCCTATAGCCAGCCAAAATT
TAATCTAA
Protein sequenceShow/hide protein sequence
MEKSSVKTAEGRKILKEKRKAVEAEAKRELHEAKARHVAHKLRSRKSHPPVLGGAATHLAGANVPAYPIASQNLI