CuGenDBv2

Gene ID	Sed0010901
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG05:40903872..40904472
RNA-Seq Expression	Sed0010901
Synteny	Sed0010901
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140001.1 uncharacterized protein LOC101219556 [Cucumis sativus]

1.0e-46

82.11

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Query:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSLTI+FPLQQNP SS FPPLPS           +S+F+LLANLGGGDA++KKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

XP_008464165.1 PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo]

1.3e-46

81.3

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Query:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSLT++FPLQQNP SS FPPLPS           +S+F+LLANLGGGDA++KKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

XP_022140463.1 uncharacterized protein LOC111011130 [Momordica charantia]

1.9e-45

79.84

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Query:  MAAKFPLSSSLTIRFPLQQNPSSLFPPLPSN--------NHRASQFRLLANLGGGDADVKK-GEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIII
        MAAKF LSSSLTI+FPLQQNPSS F PLPS           RAS+F+L+ANLGGGDA++KK G K+KFITKE+EPEQYWQ+AGEREGENPMKTPLPYIII
Subjt:  MAAKFPLSSSLTIRFPLQQNPSSLFPPLPSN--------NHRASQFRLLANLGGGDADVKK-GEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIII

Query:  FGMSTPFVILAIAFANGWVKVPVR
        FGMSTPFVILAIAFANGWVKVPVR
Subjt:  FGMSTPFVILAIAFANGWVKVPVR

XP_022971133.1 uncharacterized protein LOC111469898 [Cucurbita maxima]

5.9e-47

82.93

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Query:  MAAKFPLSSSL-TIRFPLQQNPSSLFPPLPSNNH-------RASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSL TI+FPLQQNPS  FPPLP           RASQF+LLAN GGGDA+VKKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSL-TIRFPLQQNPSSLFPPLPSNNH-------RASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

XP_023534591.1 uncharacterized protein LOC111796124 [Cucurbita pepo subsp. pepo]

3.8e-46

81.6

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Query:  MAAKFPLSSSL-TIRFPLQQNPSSLFPPLPSNNH---------RASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYII
        MAAKFPLSSSL TI+FPLQQNPS  F PLP             RASQF+LLAN GGGDA+VKKG K+KFITKEQEPEQYWQTAGEREGENPMKTPLPYII
Subjt:  MAAKFPLSSSL-TIRFPLQQNPSSLFPPLPSNNH---------RASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYII

Query:  IFGMSTPFVILAIAFANGWVKVPVR
        IFGMSTPFVILAIAFANGWVKVPVR
Subjt:  IFGMSTPFVILAIAFANGWVKVPVR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA68 Uncharacterized protein

4.9e-47

82.11

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Query:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSLTI+FPLQQNP SS FPPLPS           +S+F+LLANLGGGDA++KKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

A0A1S3CKW7 uncharacterized protein LOC103502113

6.4e-47

81.3

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Query:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSLT++FPLQQNP SS FPPLPS           +S+F+LLANLGGGDA++KKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

A0A5D3CJG8 Uncharacterized protein

6.4e-47

81.3

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Query:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSLT++FPLQQNP SS FPPLPS           +S+F+LLANLGGGDA++KKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSLTIRFPLQQNP-SSLFPPLPS-------NNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

A0A6J1CI22 uncharacterized protein LOC111011130

9.2e-46

79.84

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Query:  MAAKFPLSSSLTIRFPLQQNPSSLFPPLPSN--------NHRASQFRLLANLGGGDADVKK-GEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIII
        MAAKF LSSSLTI+FPLQQNPSS F PLPS           RAS+F+L+ANLGGGDA++KK G K+KFITKE+EPEQYWQ+AGEREGENPMKTPLPYIII
Subjt:  MAAKFPLSSSLTIRFPLQQNPSSLFPPLPSN--------NHRASQFRLLANLGGGDADVKK-GEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIII

Query:  FGMSTPFVILAIAFANGWVKVPVR
        FGMSTPFVILAIAFANGWVKVPVR
Subjt:  FGMSTPFVILAIAFANGWVKVPVR

A0A6J1I5Y3 uncharacterized protein LOC111469898

2.9e-47

82.93

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Query:  MAAKFPLSSSL-TIRFPLQQNPSSLFPPLPSNNH-------RASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF
        MAAKFPLSSSL TI+FPLQQNPS  FPPLP           RASQF+LLAN GGGDA+VKKG K+KFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIF
Subjt:  MAAKFPLSSSL-TIRFPLQQNPSSLFPPLPSNNH-------RASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIF

Query:  GMSTPFVILAIAFANGWVKVPVR
        GMSTPFVILAIAFANGWVKVPVR
Subjt:  GMSTPFVILAIAFANGWVKVPVR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G05310.1 unknown protein

6.1e-34

65.14

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Query:  LSSSLTIRFPLQQNPSSLFPPLPSNNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFA
        ++SS +    L   P    PP P       QF+L A LGGGD +VK  +K+KFITK++EPEQYWQ+ GEREGENPMKTPLPYIIIFGMSTPFVILAIAFA
Subjt:  LSSSLTIRFPLQQNPSSLFPPLPSNNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFA

Query:  NGWVKVPVR
        NGW+KVP+R
Subjt:  NGWVKVPVR

AT4G13500.1 unknown protein

3.6e-34

60.16

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Query:  MAAKFPLSSSLTIRFPLQQNPSS-------------LFPPLPSNNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLP
        MAAKF +SSS         + SS               PP P       +F+L A LGGGD +VK  +K+KFITKE+EPEQYWQ+ GEREGENPMKTPLP
Subjt:  MAAKFPLSSSLTIRFPLQQNPSS-------------LFPPLPSNNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLP

Query:  YIIIFGMSTPFVILAIAFANGWVKVPVR
        YIIIFGMSTPFVILAIAFANGW+KVP+R
Subjt:  YIIIFGMSTPFVILAIAFANGWVKVPVR

Sequences

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CDS sequence

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ATGGCCGCCAAATTCCCCCTTTCTTCTTCACTCACCATCAGATTTCCACTCCAACAAAACCCATCTTCCTTATTCCCTCCTCTTCCCAGCAACAATCACAGAGCTTCTCA
GTTCAGGCTTCTAGCAAATTTAGGTGGTGGAGATGCAGATGTCAAGAAGGGAGAGAAAAGGAAGTTTATAACCAAGGAACAAGAGCCAGAGCAGTATTGGCAGACAGCAG
GGGAGAGGGAAGGGGAGAATCCCATGAAGACTCCTCTTCCTTATATCATCATCTTCGGCATGTCGACTCCGTTCGTGATCTTAGCCATTGCTTTTGCCAATGGCTGGGTT
AAGGTACCTGTTAGATGA

mRNA sequence

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Protein sequence

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MAAKFPLSSSLTIRFPLQQNPSSLFPPLPSNNHRASQFRLLANLGGGDADVKKGEKRKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
KVPVR

Sed0010901 (gene) of Chayote v1 genome