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Sed0010903 (gene) of Chayote v1 genome

Gene IDSed0010903
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG01:9129625..9130977
RNA-Seq ExpressionSed0010903
SyntenySed0010903
Gene Ontology termsGO:0010374 - stomatal complex development (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022948421.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita moschata]2.9e-2050Show/hide
Query:  KPFCF---FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTC
        K F F   F FLIL+  SC           CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S C
Subjt:  KPFCF---FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTC

Query:  GKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        GKC PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  GKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

XP_022948422.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita moschata]1.7e-2050.72Show/hide
Query:  KPFCF---FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK
        K F F   F FLIL+  SC         CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGK
Subjt:  KPFCF---FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK

Query:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        C PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

XP_022997734.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X1 [Cucurbita maxima]1.7e-2050.72Show/hide
Query:  KPFCF-FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK
        K F F F FLIL+  SC           CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGK
Subjt:  KPFCF-FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK

Query:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        C PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

XP_022997735.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita maxima]9.9e-2151.47Show/hide
Query:  KPFCF-FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGKCR
        K F F F FLIL+  SC         CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGKC 
Subjt:  KPFCF-FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGKCR

Query:  PCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  PCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

XP_023525346.1 EPIDERMAL PATTERNING FACTOR-like protein 4 isoform X2 [Cucurbita pepo subsp. pepo]2.9e-2050Show/hide
Query:  KPFCF---FFFLILLSC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGKCR
        K F F   F FLI   C         CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGKC 
Subjt:  KPFCF---FFFLILLSC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGKCR

Query:  PCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  PCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

TrEMBL top hitse value%identityAlignment
A0A5D3BE35 Epidermal patterning factor-like protein3.2e-1770.97Show/hide
Query:  LRLARRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        +RL RR L   GSSPPRC S CGKC PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  LRLARRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

A0A6J1G961 Epidermal patterning factor-like protein1.4e-2050Show/hide
Query:  KPFCF---FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTC
        K F F   F FLIL+  SC           CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S C
Subjt:  KPFCF---FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTC

Query:  GKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        GKC PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  GKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

A0A6J1G964 Epidermal patterning factor-like protein8.2e-2150.72Show/hide
Query:  KPFCF---FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK
        K F F   F FLIL+  SC         CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGK
Subjt:  KPFCF---FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK

Query:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        C PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

A0A6J1KAS0 Epidermal patterning factor-like protein4.8e-2151.47Show/hide
Query:  KPFCF-FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGKCR
        K F F F FLIL+  SC         CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGKC 
Subjt:  KPFCF-FFFLILL--SC---------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGKCR

Query:  PCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  PCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

A0A6J1KCE5 Epidermal patterning factor-like protein8.2e-2150.72Show/hide
Query:  KPFCF-FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK
        K F F F FLIL+  SC           CCSSAKAGHTNLQ                                  LR LARREL   GSSPPRC S CGK
Subjt:  KPFCF-FFFLILL--SC-----------CCSSAKAGHTNLQ----------------------------------LR-LARRELSRVGSSPPRCMSTCGK

Query:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        C PCTAV+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  CRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 64.0e-1767.24Show/hide
Query:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        RR L  +GSSPPRC S CG+C PC  V+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 47.9e-1358.82Show/hide
Query:  GSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        GSSPP C S CGKC+PC  V+V +  G  +   +YYPE WRCKCGN L+MP
Subjt:  GSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

Q7M1E7 Polygalacturonase1.2e-0540.38Show/hide
Query:  VGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        + SSPP C + C  C+PC    + V      K  DYYP+ W C C N +Y P
Subjt:  VGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

Q9FY19 Polygalacturonase2.5e-0633.33Show/hide
Query:  LSCCCSSAKAGHTNLQLRLARREL---------SRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        L+  C S   G T  +L L ++           + + SSPP C + C  C+PC    + V H  Q +  DYYP+ W C C N +Y P
Subjt:  LSCCCSSAKAGHTNLQLRLARREL---------SRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.3e-1251.72Show/hide
Query:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        ++ L   GS PP C   CGKC PC AV+V +  G  +   +YYPE WRCKCGN L+MP
Subjt:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein1.1e-0632.14Show/hide
Query:  FLILLSCCCSSAKAGHTNLQLRLARRELSRVGSSPPRCMSTCGKCRPCTAVYVAV--PHGTQVKAADYYPEVWRCKCGNNLYMP
        F  LLS  C S   GH        R + S +GS PP C + C  C+PC      +   H     +  YYP  W C+C + ++ P
Subjt:  FLILLSCCCSSAKAGHTNLQLRLARRELSRVGSSPPRCMSTCGKCRPCTAVYVAV--PHGTQVKAADYYPEVWRCKCGNNLYMP

AT2G30370.1 allergen-related2.9e-1867.24Show/hide
Query:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        RR L  +GSSPPRC S CG+C PC  V+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

AT2G30370.2 allergen-related2.9e-1867.24Show/hide
Query:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        RR L  +GSSPPRC S CG+C PC  V+V VP GT V  A+YYPE WRCKCGN LYMP
Subjt:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

AT3G22820.1 allergen-related1.6e-1351.72Show/hide
Query:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        ++ L   GS PP C   CGKC PC AV+V +  G  +   +YYPE WRCKCGN L+MP
Subjt:  RRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)5.6e-1458.82Show/hide
Query:  GSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP
        GSSPP C S CGKC+PC  V+V +  G  +   +YYPE WRCKCGN L+MP
Subjt:  GSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAAAACCTTTTTGCTTCTTCTTTTTCTTGATATTGTTATCATGCTGCTGCTCATCTGCTAAAGCTGGCCATACAAATCTCCAGCTGAGGTTGGCAAGAAGAGA
GCTAAGTAGGGTTGGGTCGTCGCCACCTCGGTGCATGTCAACGTGCGGGAAGTGCCGGCCATGCACGGCGGTTTACGTGGCGGTGCCGCACGGAACTCAGGTGAAGGCAG
CAGACTACTACCCAGAAGTTTGGAGGTGCAAATGTGGGAACAATCTTTACATGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAAAACCTTTTTGCTTCTTCTTTTTCTTGATATTGTTATCATGCTGCTGCTCATCTGCTAAAGCTGGCCATACAAATCTCCAGCTGAGGTTGGCAAGAAGAGA
GCTAAGTAGGGTTGGGTCGTCGCCACCTCGGTGCATGTCAACGTGCGGGAAGTGCCGGCCATGCACGGCGGTTTACGTGGCGGTGCCGCACGGAACTCAGGTGAAGGCAG
CAGACTACTACCCAGAAGTTTGGAGGTGCAAATGTGGGAACAATCTTTACATGCCCTGA
Protein sequenceShow/hide protein sequence
MDIKPFCFFFFLILLSCCCSSAKAGHTNLQLRLARRELSRVGSSPPRCMSTCGKCRPCTAVYVAVPHGTQVKAADYYPEVWRCKCGNNLYMP