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Sed0010919 (gene) of Chayote v1 genome

Gene IDSed0010919
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain-containing protein
Genome locationLG08:36902824..36903641
RNA-Seq ExpressionSed0010919
SyntenySed0010919
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056859.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]3.0e-3876.27Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKHGR--GGIATNSGGDSEKELLLGG-KKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEF
        MGNCCRSQSST V+AGDDWGSF+SKHGR  GG AT SGGD EK  LLG  K+A SC+  +  VKIKMTKRELE LVKKLEMQGL+L QV+G+MMKGE+E+
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKHGR--GGIATNSGGDSEKELLLGG-KKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEF

Query:  EVEHHRSWRPSLQSIPED
        E+EHHRSWRPSLQSIPED
Subjt:  EVEHHRSWRPSLQSIPED

XP_022140150.1 uncharacterized protein LOC111010880 [Momordica charantia]1.5e-4280.34Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKG--EDEFE
        MGNCCRSQSST VWAGDDWGSFNSKHGRGG AT SGGD+EK+ LLG KKA + AAA GEVKIKMTK+ELEDLV+KLE QGLSL +V+G+M+KG  EDE+E
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKG--EDEFE

Query:  VEHHRSWRPSLQSIPED
        +EHHRSWRPSLQSIPED
Subjt:  VEHHRSWRPSLQSIPED

XP_022933211.1 uncharacterized protein LOC111440057 [Cucurbita moschata]4.0e-3571.55Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE
        MGNCCRSQSST ++AGDDWGSF+SKH  GRGG A+ S GD EK  LLG K+  SC     +VKIKMTKRELEDLVK LE++GLSL QV+G+MM  EDEF+
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE

XP_023001321.1 uncharacterized protein LOC111495485 [Cucurbita maxima]8.9e-3572.41Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE
        MGNCCRSQSST V+AGDDWGSF+SKH  GRGG A+ S GD EK  LLG K+  SC     +VKIKMTKRELEDLVK LE++GLSL QV+G+MM  EDEF+
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE

XP_038895954.1 uncharacterized protein LOC120084128 [Benincasa hispida]1.3e-3877.12Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQM-MKGEDEF
        MGNCCRSQSST V+ GDDWGSF+SKH  GRGG AT SGGD EK  LLG K+A SC+    +VKIKM+KRELEDLVKKLEMQG+SL QV+G+M M GEDEF
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQM-MKGEDEF

Query:  EVEHHRSWRPSLQSIPED
        EVEHHRSWRPSLQSIPED
Subjt:  EVEHHRSWRPSLQSIPED

TrEMBL top hitse value%identityAlignment
A0A0A0LRL1 Uncharacterized protein1.1e-3875.63Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRG----GIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDE
        MGNCCRSQSST V+AGDDWGSF+SKHGRG      A  SGGD EK  LLG K+A SC+  +  VKIKMTKRELE LVKKLEMQGLSL QV+G+MMKGE+E
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRG----GIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDE

Query:  FEVEHHRSWRPSLQSIPED
        FE+EHHRSWRPSLQSIPED
Subjt:  FEVEHHRSWRPSLQSIPED

A0A5A7UTK3 DUF4228 domain-containing protein1.4e-3876.27Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKHGR--GGIATNSGGDSEKELLLGG-KKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEF
        MGNCCRSQSST V+AGDDWGSF+SKHGR  GG AT SGGD EK  LLG  K+A SC+  +  VKIKMTKRELE LVKKLEMQGL+L QV+G+MMKGE+E+
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKHGR--GGIATNSGGDSEKELLLGG-KKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEF

Query:  EVEHHRSWRPSLQSIPED
        E+EHHRSWRPSLQSIPED
Subjt:  EVEHHRSWRPSLQSIPED

A0A6J1CEB2 uncharacterized protein LOC1110108807.3e-4380.34Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKG--EDEFE
        MGNCCRSQSST VWAGDDWGSFNSKHGRGG AT SGGD+EK+ LLG KKA + AAA GEVKIKMTK+ELEDLV+KLE QGLSL +V+G+M+KG  EDE+E
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKG--EDEFE

Query:  VEHHRSWRPSLQSIPED
        +EHHRSWRPSLQSIPED
Subjt:  VEHHRSWRPSLQSIPED

A0A6J1EYG4 uncharacterized protein LOC1114400571.9e-3571.55Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE
        MGNCCRSQSST ++AGDDWGSF+SKH  GRGG A+ S GD EK  LLG K+  SC     +VKIKMTKRELEDLVK LE++GLSL QV+G+MM  EDEF+
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE

A0A6J1KIA5 uncharacterized protein LOC1114954854.3e-3572.41Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE
        MGNCCRSQSST V+AGDDWGSF+SKH  GRGG A+ S GD EK  LLG K+  SC     +VKIKMTKRELEDLVK LE++GLSL QV+G+MM  EDEF+
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKH--GRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFE

Query:  VEHHRSWRPSLQSIPE
         EHHRSWRPSLQSIPE
Subjt:  VEHHRSWRPSLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.4.9e-0731.03Show/hide
Query:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQ--MMKGEDEFE
        MGNC R +S    WAG+DW  F ++       ++      K +++      S  +   E+KI++TK++L DL+ K+ +  L+  Q      ++      E
Subjt:  MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQ--MMKGEDEFE

Query:  VEHHRSWRPSLQSIPE
            R WRP LQSIPE
Subjt:  VEHHRSWRPSLQSIPE

AT4G21920.1 unknown protein1.7e-1233.86Show/hide
Query:  MGNC-CRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLG-----GKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMM-KG
        MGNC C ++ +T  W+GDD GS+N +  R         + + E LLG        + S ++   E+KI++TK+ELEDL++ + ++ L+  ++L +++ +G
Subjt:  MGNC-CRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLG-----GKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMM-KG

Query:  EDEF------EVEHHRSWRPSLQSIPE
         D+          HH+ W+P LQSIPE
Subjt:  EDEF------EVEHHRSWRPSLQSIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTGTTGCAGAAGCCAATCTTCTACGCAGGTCTGGGCCGGAGACGATTGGGGCTCCTTCAATTCCAAGCACGGCCGCGGGGGAATCGCCACCAACTCCGGCGG
CGATTCAGAGAAGGAGCTGCTACTTGGAGGGAAGAAAGCGCCGTCGTGTGCGGCGGCGGTGGGGGAAGTGAAAATCAAGATGACGAAGAGAGAGCTGGAGGATCTGGTGA
AGAAGCTGGAGATGCAAGGGTTGAGTCTGGGGCAAGTTCTTGGGCAGATGATGAAGGGTGAGGATGAATTTGAGGTCGAGCATCATCGCTCATGGAGGCCTTCTCTTCAG
AGCATTCCAGAAGATTGCTAA
mRNA sequenceShow/hide mRNA sequence
CGCCAAACAATTTTCTACCAGTGCCACGTAAGACTCCGTCGCGTCCACCGTGGCGCCTTCTCCGACGCGGTCTCTTTCCCCCCGTTCCGTTCTCTTTCGTCTCCATTTCC
CTATTTAAACGGAAAAAATTTCCCCCAAATCCCCAAAATCAATTTCACCAAAAAAAAACCCTAATTCATTTCTCAACCCTAAAAAAGAAACAGAGAACAGATCAAAGAAT
CGCAGCGATGGGGAACTGTTGCAGAAGCCAATCTTCTACGCAGGTCTGGGCCGGAGACGATTGGGGCTCCTTCAATTCCAAGCACGGCCGCGGGGGAATCGCCACCAACT
CCGGCGGCGATTCAGAGAAGGAGCTGCTACTTGGAGGGAAGAAAGCGCCGTCGTGTGCGGCGGCGGTGGGGGAAGTGAAAATCAAGATGACGAAGAGAGAGCTGGAGGAT
CTGGTGAAGAAGCTGGAGATGCAAGGGTTGAGTCTGGGGCAAGTTCTTGGGCAGATGATGAAGGGTGAGGATGAATTTGAGGTCGAGCATCATCGCTCATGGAGGCCTTC
TCTTCAGAGCATTCCAGAAGATTGCTAATCCAGATTTGTGGAAATAAGAAATGAAAGAGGAAGCTTTATTCATTCTATTTTGCACAGAAATTAATGTGTTCATATTTGTG
TTTTCTTGGATTTGTTCATTGATTCATTGTTTCCCCCTCTTTTGTAAATGTTTAGGCCAAATTCACATTTATTGCAAGCTCACGTGAACGTTAAGACTCAGTTTGGATAA
CTATTTTATTTTTTGATTTTTGTTTATGAAATTTAAGATTACAAATAA
Protein sequenceShow/hide protein sequence
MGNCCRSQSSTQVWAGDDWGSFNSKHGRGGIATNSGGDSEKELLLGGKKAPSCAAAVGEVKIKMTKRELEDLVKKLEMQGLSLGQVLGQMMKGEDEFEVEHHRSWRPSLQ
SIPEDC