CuGenDBv2

Gene ID	Sed0010921
Organism	Sechium edule (Chayote v1)
Description	mRNA, clone: RTFL01-07-K18
Genome location	LG09:2106827..2107512
RNA-Seq Expression	Sed0010921
Synteny	Sed0010921
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575084.1 hypothetical protein SDJN03_25723, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-31

50.26

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQNG---
        M+TS +AGTLS  ANNG+ FAKFLNRLD +SN+SISA DSI D IPPSS AG+LQLSAALFPVATIAPPP+         RTFLRRKRRT + + +G   
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQNG---

Query:  -------------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
                                                         N AYYF YEVVC IALSN VHFAF+ VVRFAA+AIG  ++ K
Subjt:  -------------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]

1.0e-32

51.32

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQN----
        M++S +AGTLS AANNGL FAKFLNRLD VSN+ +SA+DSI + IPPSSAAG+LQLSAALFPVATIAPPP+         RTFLRRKRRT + + +    
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQN----

Query:  ----------------------------------------------GNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
                                                       N AYYF YEVVC IALSN VHFAF+ VVRFAADAIG  ++GK
Subjt:  ----------------------------------------------GNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

XP_022959163.1 uncharacterized protein LOC111460236 [Cucurbita moschata]

7.2e-31

49.74

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQNG---
        M+TS +AGTLS  ANNG+ FAKFLNRLD +SN+S SA DSI D IPPSSAAG+LQLSAALFPVATIAPPP+         R FLRRKRRT + + +G   
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQNG---

Query:  -------------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
                                                         N AYYF YEVVC IALSN VHFAF+ VVRFAA+AIG  ++ K
Subjt:  -------------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

XP_023006205.1 uncharacterized protein LOC111499005 [Cucurbita maxima]

5.5e-31

50.79

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------
        M+TS +AGTLS  ANNG+ FAKFLNRLD +SN+SISA DSI D IPPSSAAG+LQLS ALFPVATIAPPP+         RTFLRRKRRT + +      
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------

Query:  ----QNG------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
             NG                                          N AYYF YEVVC IALSN VHFAF+ VVRFAA+AIG  ++ K
Subjt:  ----QNG------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

XP_023548774.1 uncharacterized protein LOC111807330 [Cucurbita pepo subsp. pepo]

2.5e-31

50.79

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------
        M+TS +AGTLS  ANNG+ FAKFLNRLD +SN+SISA DSI D IPPSSAAG+LQLSAALFPVATIAPPP+         RTFLRRKRRT + +      
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------

Query:  ----QNG------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
             NG                                          N AYYF YEV+C IALSN VHFAF+ VVRFAA+AIG  ++ K
Subjt:  ----QNG------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG90 Uncharacterized protein

9.4e-29

46.15

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------
        M++S +AGTLS  ANN + FAK LNRLD VSN+ IS  DSI D IPPSS A +L+LSAALFPVATIAPPP+         RTFLRRKRRT + +      
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------

Query:  ----------------------------------------------QNGNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGKFCFQ
                                                       + N AYYF YEVVC IALSN VHFAF+ VVRFAA+AIG  ++GK   +
Subjt:  ----------------------------------------------QNGNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGKFCFQ

A0A6J1CBL0 uncharacterized protein LOC111009719

4.8e-33

51.32

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQN----
        M++S +AGTLS AANNGL FAKFLNRLD VSN+ +SA+DSI + IPPSSAAG+LQLSAALFPVATIAPPP+         RTFLRRKRRT + + +    
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQN----

Query:  ----------------------------------------------GNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
                                                       N AYYF YEVVC IALSN VHFAF+ VVRFAADAIG  ++GK
Subjt:  ----------------------------------------------GNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

A0A6J1EWH7 uncharacterized protein LOC111436769

1.6e-28

48.66

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------
        M+TS +AGTLS  ANNG+ FAKFLNR D VSN+ ISA DSIAD I P SAAG+LQLSAALFPVATIAPPP+         RTFLRRKRRT + +      
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------

Query:  ------------------------------------------QNGNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
                                                   + N AYYF YEVV  IALSN VHFAF+ V+RFA +AI   ++GK
Subjt:  ------------------------------------------QNGNLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

A0A6J1H560 uncharacterized protein LOC111460236

3.5e-31

49.74

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQNG---
        M+TS +AGTLS  ANNG+ FAKFLNRLD +SN+S SA DSI D IPPSSAAG+LQLSAALFPVATIAPPP+         R FLRRKRRT + + +G   
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFVQNG---

Query:  -------------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
                                                         N AYYF YEVVC IALSN VHFAF+ VVRFAA+AIG  ++ K
Subjt:  -------------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

A0A6J1KZI4 uncharacterized protein LOC111499005

2.7e-31

50.79

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Query:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------
        M+TS +AGTLS  ANNG+ FAKFLNRLD +SN+SISA DSI D IPPSSAAG+LQLS ALFPVATIAPPP+         RTFLRRKRRT + +      
Subjt:  METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPI---------RTFLRRKRRTYKFV------

Query:  ----QNG------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK
             NG                                          N AYYF YEVVC IALSN VHFAF+ VVRFAA+AIG  ++ K
Subjt:  ----QNG------------------------------------------NLAYYFFYEVVCLIALSNYVHFAFEIVVRFAADAIGYFKKGK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06780.1 glycine-rich protein

9.7e-10

32.98

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Query:  METSPIAGTLST-AANNGLTFAK-FLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPIRTF-------LRRKRRTY---------
        ME S IA T++   A  G+ F K  L RLD ++NH IS ADS+ DH  P    G +Q SA +FPV  IAPPP+R+        +R+KRRT          
Subjt:  METSPIAGTLST-AANNGLTFAK-FLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPIRTF-------LRRKRRTY---------

Query:  ------KFVQNGNL----------------------------------------------AYYFFYEVVCLIALSNYVHFAFEIVVRFAAD
              +F+  G+                                               A  F YEV+C IALSN VHFAF+ +VR   D
Subjt:  ------KFVQNGNL----------------------------------------------AYYFFYEVVCLIALSNYVHFAFEIVVRFAAD

Sequences

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CDS sequence

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ATGGAAACCTCGCCGATCGCCGGAACCCTTTCAACGGCCGCCAACAACGGCCTTACCTTCGCCAAATTCCTCAACCGCCTCGATTCCGTATCCAATCACTCCATCTCCGC
CGCCGATTCAATCGCCGACCACATCCCGCCGTCTTCCGCCGCCGGATCTCTACAATTATCAGCCGCACTGTTCCCCGTCGCCACCATCGCTCCCCCGCCGATCCGAACGT
TTCTCCGTAGAAAGCGCCGTACATATAAATTTGTTCAAAATGGAAATCTGGCGTATTATTTCTTTTATGAAGTTGTTTGTTTGATTGCACTCTCGAATTATGTTCATTTT
GCGTTTGAGATTGTTGTTAGATTTGCAGCTGATGCAATTGGGTACTTCAAAAAGGGGAAATTTTGTTTCCAAGAAGTGCACAGAGTTTGA

mRNA sequence

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Protein sequence

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METSPIAGTLSTAANNGLTFAKFLNRLDSVSNHSISAADSIADHIPPSSAAGSLQLSAALFPVATIAPPPIRTFLRRKRRTYKFVQNGNLAYYFFYEVVCLIALSNYVHF
AFEIVVRFAADAIGYFKKGKFCFQEVHRV

Sed0010921 (gene) of Chayote v1 genome