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Sed0010982 (gene) of Chayote v1 genome

Gene IDSed0010982
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationLG04:34937376..34938250
RNA-Seq ExpressionSed0010982
SyntenySed0010982
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]3.9e-0953.61Show/hide
Query:  MARLE-NYCYFLTNSATKSQACLIFLFLLVLLPVVVPRRLSPS----TSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK
        MA+ E NY      ++TKSQAC  FLFLLVLL + VP R S S     ST  P    S   M EQAF  P        QFEA+MHEVPSGPNPTSNK
Subjt:  MARLE-NYCYFLTNSATKSQACLIFLFLLVLLPVVVPRRLSPS----TSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1661.96Show/hide
Query:  MARLENYCYFLTNSATKSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK
        MARL+ + +  + ++TKS+AC  FLFLL+L         S S STP  RP SS + MEEQAFSSPYSS+RT QQFEAAMHEVPSGPNPT+NK
Subjt:  MARLENYCYFLTNSATKSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]1.5e-0555.26Show/hide
Query:  KSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK
        KSQAC  FLFLLVLL +VVP R S   +TP  RP S+ + M                 FEAAMHEVPSGPNPTSNK
Subjt:  KSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein7.4e-0655.26Show/hide
Query:  KSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK
        KSQAC  FLFLLVLL +VVP R S   +TP  RP S+ + M                 FEAAMHEVPSGPNPTSNK
Subjt:  KSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGACTAGAAAATTATTGTTATTTCTTAACTAATTCAGCAACAAAGTCTCAAGCTTGCTTGATCTTCCTCTTCCTACTCGTTCTCCTCCCGGTTGTTGTTCCTCG
TCGTTTGTCGCCCTCAACGAGTACTCCTCGACCCCGTCCTCGTTCTTCCCCCGTGGTCATGGAAGAACAAGCCTTCTCTAGCCCTTATTCTAGTGAGAGAACATTTCAGC
AATTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACATCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
GCCAATTAGTCTCTCATTGACAGATGCAAAAGCAAAGTGGCCAATAATTTCATCTTCCCAATGCCAATAAAACTCTCACTGTTCTCTCAAACAGTTCCTTTTTTTCTTAT
AAACCACACCTTTTTCTCCTCTTCCTCCTCAAAACCTAACCGCTCACCTTTTTCATGGATATTGATCTCTCCTTCGGCTTCTCGGGGGACGTCGCCATTACCGATCATCG
TCATCGTCATCATCAGCTTCTTTCCACTCCCATTGATTCATGGCTAGACTAGAAAATTATTGTTATTTCTTAACTAATTCAGCAACAAAGTCTCAAGCTTGCTTGATCTT
CCTCTTCCTACTCGTTCTCCTCCCGGTTGTTGTTCCTCGTCGTTTGTCGCCCTCAACGAGTACTCCTCGACCCCGTCCTCGTTCTTCCCCCGTGGTCATGGAAGAACAAG
CCTTCTCTAGCCCTTATTCTAGTGAGAGAACATTTCAGCAATTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACATCCAACAAGTAAGATTGAAAAAAC
AATGAAAGAGAGTTATATTAATGAAGGATTATTTGTATGGAATATTTTTATATACTTTTTTTTTCATTTTGGGTTTTGTTTTGTTATATTTTTAGTTTTGTTGTTGGAAA
TGGTTTATTGGGTATGTACATAGTAAGCAATAGTGTCCTATTTATGGATTATTTTTTCTGAACTTGCAAGATGTTATCACATGTGCTATATTATTAGATCACTTTCTGCT
TCATCTTTAATTTCTTCTTGTTTTGGTAGAAAAATCTTGATCTCTGTTTCTAAATTGAACTTTGTGCTGTTTAGTTTAGAGGCTTTATGAGCCTTTTGTGGAGAC
Protein sequenceShow/hide protein sequence
MARLENYCYFLTNSATKSQACLIFLFLLVLLPVVVPRRLSPSTSTPRPRPRSSPVVMEEQAFSSPYSSERTFQQFEAAMHEVPSGPNPTSNK