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Sed0011004 (gene) of Chayote v1 genome

Gene IDSed0011004
OrganismSechium edule (Chayote v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationLG08:31207309..31208253
RNA-Seq ExpressionSed0011004
SyntenySed0011004
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139237.1 pathogenesis-related protein PR-4A [Cucumis sativus]5.7e-6080.28Show/hide
Query:  MERVSL-MMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV
        ME+ S+ M+L+L L ++SLANAQSA+NVRATYH YNPQNINWDY KASVYCATWDAN+PLEWRRRY WTAFCGPVGPRGQASCGRCLKVTN +TKAST V
Subjt:  MERVSL-MMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV

Query:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        RIVDQCSNGGLDLD   FK+IDTNG GY  G+L VNY+FVNC
Subjt:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

XP_022143159.1 pathogenesis-related protein PR-4-like [Momordica charantia]2.9e-6482.27Show/hide
Query:  MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVR
        MER  L+MLVLGLCL+ +ANAQSA+NVRATYH YNPQNINWDY +ASV+CATWDAN+PLEWRRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVR
Subjt:  MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVR

Query:  IVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        IVDQC+NGGLDLD NVF SIDTNG G+ARG++ VNY FVNC
Subjt:  IVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

XP_022946138.1 pathogenesis-related protein P2-like [Cucurbita moschata]5.7e-6080Show/hide
Query:  ERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRI
        +R  LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDAN+PLE+RRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVRI
Subjt:  ERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRI

Query:  VDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        VDQCSNGGLDLD NVF+ IDTN  GY RG+LIVNY+FVNC
Subjt:  VDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

XP_023521169.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo]1.5e-6082.35Show/hide
Query:  LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQC
        LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASV+CATWDAN+PLE+RRRYGWTAFCGPVGPRGQASCGRCL+VTNT+TKAS IVRIVDQC
Subjt:  LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQC

Query:  SNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        SNGGLDLD NVF+ IDTNG GY RG+LIVNY FVNC
Subjt:  SNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]2.3e-6181.69Show/hide
Query:  MERVSLMM-LVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV
        ME+ S+MM LVL L ++S+ANAQSA+NVRATYH YNPQNINWDY +ASVYCATWDAN+PLEWRRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T ASTIV
Subjt:  MERVSLMM-LVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV

Query:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        RIVDQCSNGGLDLD NVFK +DTNG G  RG+L VNY FVNC
Subjt:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG76 Barwin domain-containing protein2.8e-6080.28Show/hide
Query:  MERVSL-MMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV
        ME+ S+ M+L+L L ++SLANAQSA+NVRATYH YNPQNINWDY KASVYCATWDAN+PLEWRRRY WTAFCGPVGPRGQASCGRCLKVTN +TKAST V
Subjt:  MERVSL-MMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV

Query:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        RIVDQCSNGGLDLD   FK+IDTNG GY  G+L VNY+FVNC
Subjt:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

A0A6J1CNH9 pathogenesis-related protein PR-4-like1.4e-6482.27Show/hide
Query:  MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVR
        MER  L+MLVLGLCL+ +ANAQSA+NVRATYH YNPQNINWDY +ASV+CATWDAN+PLEWRRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVR
Subjt:  MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVR

Query:  IVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        IVDQC+NGGLDLD NVF SIDTNG G+ARG++ VNY FVNC
Subjt:  IVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like4.7e-6079.58Show/hide
Query:  MERVS-LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV
        ME+VS LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASV+CATWDAN+P+EWRR+YGWTAFCGPVGPRGQASCGRCL+VTNT+T AS IV
Subjt:  MERVS-LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIV

Query:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        RIVDQC+NGGLDLD NVFK IDTNG G  RG+LIVNY FVNC
Subjt:  RIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

A0A6J1G2Z1 pathogenesis-related protein P2-like2.8e-6080Show/hide
Query:  ERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRI
        +R  LM+L L L ++SLANAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDAN+PLE+RRRYGWTAFCGPVGPRGQASCGRCL+VTNT+T+AS IVRI
Subjt:  ERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRI

Query:  VDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        VDQCSNGGLDLD NVF+ IDTN  GY RG+LIVNY+FVNC
Subjt:  VDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

A0A6J1KIN7 pathogenesis-related protein P2-like8.0e-6080.88Show/hide
Query:  LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQC
        LM+L L L ++SL NAQSA+NVRATYH YNPQ+INWDY +ASVYCATWDAN+PLE+RRRYGWTAFCGPVGPRGQASCGRCL+VTNT+TKAS IVRIVDQC
Subjt:  LMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQC

Query:  SNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        SNGGLDLD NVF+ IDTNG GY RG+LIV Y+FV+C
Subjt:  SNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN15.0e-5173.11Show/hide
Query:  SASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDT
        SA NVRATYH YNPQN+ WD N  S YC+TWDAN+PL WR++YGWTAFCGPVGPRG+ SCG+CL+VTNT T A T VRIVDQCSNGGLDLD NVF+ IDT
Subjt:  SASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDT

Query:  NGQGYARGNLIVNYDFVNC
        +G G  +G+LIVNY FV+C
Subjt:  NGQGYARGNLIVNYDFVNC

P09762 Wound-induced protein WIN22.5e-5073.11Show/hide
Query:  SASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDT
        SA NVRATYH YNPQN+ WD N  S YC+TWDAN+P  WR +YGWTAFCGPVGPRG+ SCG+CL+VTNT T A T VRIVDQCSNGGLDLD NVF+ IDT
Subjt:  SASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSIDT

Query:  NGQGYARGNLIVNYDFVNC
        +G G  +G+LIVNY FVNC
Subjt:  NGQGYARGNLIVNYDFVNC

P29062 Pathogenesis-related protein PR-4A2.8e-5467.59Show/hide
Query:  MERVSLMMLVLGLCLVS----LANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKAS
        MERV+   L + L ++S    +A AQSA+NVR+TYH YNPQNINWD   AS +CATWDA++PL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT T   
Subjt:  MERVSLMMLVLGLCLVS----LANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKAS

Query:  TIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        T VRIVDQCSNGGLDLD NVF  +DTNG GY +G+L VNY+FVNC
Subjt:  TIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

P29063 Pathogenesis-related protein PR-4B4.9e-5467.59Show/hide
Query:  MERVSLMMLVLGLCLVS----LANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKAS
        MERV+   L + L ++S    +A AQSA+NVR+TYH YNPQNINWD   AS +CATWDA++PL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT T   
Subjt:  MERVSLMMLVLGLCLVS----LANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKAS

Query:  TIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
          VRIVDQCSNGGLDLD NVF  +DTNG GY +G+LIVNY+FVNC
Subjt:  TIVRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

P32045 Pathogenesis-related protein P22.0e-5570.63Show/hide
Query:  MERVSLMMLVLGL--CLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTI
        MERV+ + +   +   ++++A AQSA+NVRATYH YNPQNINWD   ASVYCATWDA++PLEWRRRYGWTAFCGP GP GQASCGRCL+VTNT T     
Subjt:  MERVSLMMLVLGL--CLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTI

Query:  VRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC
        VRIVDQC NGGLDLD NVF  +DTNG GY RGNL VNY+FVNC
Subjt:  VRIVDQCSNGGLDLDYNVFKSIDTNGQGYARGNLIVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 43.1e-4867.5Show/hide
Query:  QSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSID
        +SASNVRATYH+YNP   NWD    S YC+TWDA++P  WR +YGWTAFCGP GPRGQASCG+CL+V NT T A+  VRIVDQCSNGGLDLD  +F  ID
Subjt:  QSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGLDLDYNVFKSID

Query:  TNGQGYARGNLIVNYDFVNC
        T+G GY +G+LIV+Y FV+C
Subjt:  TNGQGYARGNLIVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGTAAGTTTGATGATGTTAGTTTTGGGTTTGTGCCTTGTAAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACATATCACTATTACAACCCACA
AAACATCAATTGGGATTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACCAGCCCTTAGAATGGCGTCGACGCTACGGTTGGACCGCCTTCTGCGGTCCTG
TCGGTCCTCGTGGCCAAGCTTCGTGTGGTCGTTGTTTAAAGGTGACCAACACAGACACAAAAGCTTCTACAATAGTAAGAATTGTTGATCAATGTTCTAATGGAGGGTTG
GATTTGGATTATAATGTGTTTAAGAGCATAGACACCAATGGACAAGGATACGCACGTGGGAATCTCATTGTCAATTATGACTTTGTCAATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTAAAAGAAAAAAAAAACCACAAACATCTGATAGAGAAATGGAGAGAGTAAGTTTGATGATGTTAGTTTTGGGTTTGTGCCTTGTAAGCTTGGCAAATGCTCAAAGTG
CTTCAAATGTGAGGGCTACATATCACTATTACAACCCACAAAACATCAATTGGGATTACAATAAGGCAAGTGTTTATTGTGCAACATGGGATGCTAACCAGCCCTTAGAA
TGGCGTCGACGCTACGGTTGGACCGCCTTCTGCGGTCCTGTCGGTCCTCGTGGCCAAGCTTCGTGTGGTCGTTGTTTAAAGGTGACCAACACAGACACAAAAGCTTCTAC
AATAGTAAGAATTGTTGATCAATGTTCTAATGGAGGGTTGGATTTGGATTATAATGTGTTTAAGAGCATAGACACCAATGGACAAGGATACGCACGTGGGAATCTCATTG
TCAATTATGACTTTGTCAATTGTTAAACATTATTTTTCTTTCAATTCATTCTCCCTAAGAAGTGGAATGGAGAAAGGAAAATTATGTGGCATAATGAATAAAAAGTATGA
ATAAACTATGATCTTAAAAGCTTATCAATTTTATGAAGG
Protein sequenceShow/hide protein sequence
MERVSLMMLVLGLCLVSLANAQSASNVRATYHYYNPQNINWDYNKASVYCATWDANQPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTDTKASTIVRIVDQCSNGGL
DLDYNVFKSIDTNGQGYARGNLIVNYDFVNC