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Sed0011013 (gene) of Chayote v1 genome

Gene IDSed0011013
OrganismSechium edule (Chayote v1)
Descriptionzf-RVT domain-containing protein
Genome locationLG06:1535063..1537302
RNA-Seq ExpressionSed0011013
SyntenySed0011013
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149132.1 uncharacterized protein LOC101204884 [Cucumis sativus]9.6e-4686.79Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKEIL IQKFRRIVSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE E WG +EFCIMAKHF+RQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYHS
Subjt:  PYAYHS
XP_022150011.1 uncharacterized protein LOC111018291 isoform X1 [Momordica charantia]1.9e-4687.74Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKEIL IQKFRRIVSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFE+E WG +EFCIMAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYH+
Subjt:  PYAYHS
XP_022150012.1 uncharacterized protein LOC111018291 isoform X2 [Momordica charantia]1.9e-4687.74Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKEIL IQKFRRIVSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFE+E WG +EFCIMAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYH+
Subjt:  PYAYHS
XP_022942452.1 uncharacterized protein LOC111447487 [Cucurbita moschata]8.2e-4583.96Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        M L Y AKE+L IQKFRR+VSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE E WG +EFC+MAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYHS
Subjt:  PYAYHS
XP_022976595.1 uncharacterized protein LOC111476941 [Cucurbita maxima]1.3e-4584.91Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKE+L IQKFRR+VSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE E WG +EFC+MAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYHS
Subjt:  PYAYHS
TrEMBL top hitse value%identityAlignment
A0A0A0KPE6 Uncharacterized protein4.7e-4686.79Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKEIL IQKFRRIVSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE E WG +EFCIMAKHF+RQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYHS
Subjt:  PYAYHS
A0A6J1D9J7 uncharacterized protein LOC111018291 isoform X29.4e-4787.74Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKEIL IQKFRRIVSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFE+E WG +EFCIMAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYH+
Subjt:  PYAYHS
A0A6J1DA58 uncharacterized protein LOC111018291 isoform X19.4e-4787.74Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKEIL IQKFRRIVSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFE+E WG +EFCIMAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYH+
Subjt:  PYAYHS
A0A6J1FUV5 uncharacterized protein LOC1114474873.9e-4583.96Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        M L Y AKE+L IQKFRR+VSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE E WG +EFC+MAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYHS
Subjt:  PYAYHS
A0A6J1IJX1 uncharacterized protein LOC1114769416.1e-4684.91Show/hide
Query:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS
        MRL Y AKE+L IQKFRR+VSY+GFYLF S+L+YA+TSNTTRAGYSRGDQFYASYPAGTELLTDT KLYKAALGNCFE E WG +EFC+MAKHFERQGKS
Subjt:  MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKS

Query:  PYAYHS
        PYAYHS
Subjt:  PYAYHS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14990.1 unknown protein1.3e-4380.61Show/hide
Query:  EILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKSPYAYHS
        E++ IQK RR VSY+GFY FT+ LT+ +T+NTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNC+E+E WG VEFCIMAKHF+RQGKSPY YHS
Subjt:  EILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKSPYAYHS
AT1G14990.2 unknown protein1.3e-4380.61Show/hide
Query:  EILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKSPYAYHS
        E++ IQK RR VSY+GFY FT+ LT+ +T+NTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNC+E+E WG VEFCIMAKHF+RQGKSPY YHS
Subjt:  EILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKSPYAYHS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCTGAATTACGAAGCTAAAGAGATCCTAAACATTCAAAAATTTCGAAGAATTGTGTCCTATTCTGGATTCTATCTCTTCACTTCTCTTCTAACCTACGCTTTTAC
AAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACCGACACTGCTAAGTTGTACAAAGCTGCTCTTG
GGAATTGTTTTGAAGCAGAAGGATGGGGTCGGGTTGAATTCTGCATCATGGCTAAGCATTTTGAGCGTCAAGGAAAATCGCCTTATGCATATCATTCTTGGGTAGGAAAA
CAGCAGTCAACAACCAAAGAGCTTTGGGACTTTTTACCAGGTTTTTTCAAGTTTAACCATTGA
mRNA sequenceShow/hide mRNA sequence
GTGAAATCCTAAACCCAAGTGTCTCCCAATGAACCCTTGCCCTAATCGCCTTCAATCTGTCTCTAAACCACAACCTCCAATTTATGTAAAAAATCCCTTTCTATATTCAA
GTTATGCGGCTGAATTACGAAGCTAAAGAGATCCTAAACATTCAAAAATTTCGAAGAATTGTGTCCTATTCTGGATTCTATCTCTTCACTTCTCTTCTAACCTACGCTTT
TACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACCGACACTGCTAAGTTGTACAAAGCTGCTC
TTGGGAATTGTTTTGAAGCAGAAGGATGGGGTCGGGTTGAATTCTGCATCATGGCTAAGCATTTTGAGCGTCAAGGAAAATCGCCTTATGCATATCATTCTTGGGTAGGA
AAACAGCAGTCAACAACCAAAGAGCTTTGGGACTTTTTACCAGGTTTTTTCAAGTTTAACCATTGATTTCCGGGTGACAGACTTGGGTCATATGTTCGAATCTTCGCCCT
TTTATTTAATTGTATTATTCTTTAAATATATACGTATTGGGAACAAACAAGACTTAGATCTTCACCTCTTTGATTACTGCTATTTTGAGATATTCTTCTAGGATGCCATG
GTTGAATATT
Protein sequenceShow/hide protein sequence
MRLNYEAKEILNIQKFRRIVSYSGFYLFTSLLTYAFTSNTTRAGYSRGDQFYASYPAGTELLTDTAKLYKAALGNCFEAEGWGRVEFCIMAKHFERQGKSPYAYHSWVGK
QQSTTKELWDFLPGFFKFNH