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Sed0011054 (gene) of Chayote v1 genome

Gene IDSed0011054
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:32433046..32433958
RNA-Seq ExpressionSed0011054
SyntenySed0011054
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1225651.1 hypothetical protein CJ030_MR1G002309 [Morella rubra]9.2e-0535.44Show/hide
Query:  LLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNV--PPKGCQC--IPKGFNSRICRCNVVC
        L+  L+L L  ++HS  ++K CP E  + G C  +FG S+C+    A+ G    PP  C+C  IP+      C+C+V C
Subjt:  LLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNV--PPKGCQC--IPKGFNSRICRCNVVC

KAG6607501.1 hypothetical protein SDJN03_00843, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2975.29Show/hide
Query:  MGKKFITVPLLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVCH
        MGKK I V LLSFLLL L S SHS+DQSKTCP +F S GTC G  GISECYSE+MAR+GN+PPKGC+CIP G +SRICRCNVVCH
Subjt:  MGKKFITVPLLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVCH

KAG6607502.1 hypothetical protein SDJN03_00844, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2570.59Show/hide
Query:  MGKKFI-TVPLLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC
        M KKFI +  LLSFL+L L S SHS+DQSKTCP EF S GTC    G+SECYSE+MAR GN+PPKGC+CIPKG +SRICRCN VC
Subjt:  MGKKFI-TVPLLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC

KGN52689.1 hypothetical protein Csa_008701 [Cucumis sativus]1.4e-1355.93Show/hide
Query:  DQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC
        DQ +TCP++F S GTC   +G + CY E M + GN PPK CQCIP G NSR C+CN+ C
Subjt:  DQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC

KGN52690.1 hypothetical protein Csa_007932 [Cucumis sativus]8.6e-2768.24Show/hide
Query:  KKFITVPLLSFLLLCLASISH---SIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC
        K FI++PLLSFLLLCL SI+H   S DQSKTCP++F S GTC G FG+SECY EAMA+ GN+PPKGC+CIP G NSR C CN++C
Subjt:  KKFITVPLLSFLLLCLASISH---SIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC

TrEMBL top hitse value%identityAlignment
A0A0A0KSV3 Uncharacterized protein4.1e-2768.24Show/hide
Query:  KKFITVPLLSFLLLCLASISH---SIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC
        K FI++PLLSFLLLCL SI+H   S DQSKTCP++F S GTC G FG+SECY EAMA+ GN+PPKGC+CIP G NSR C CN++C
Subjt:  KKFITVPLLSFLLLCLASISH---SIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC

A0A0A0KUV4 Uncharacterized protein6.9e-1455.93Show/hide
Query:  DQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC
        DQ +TCP++F S GTC   +G + CY E M + GN PPK CQCIP G NSR C+CN+ C
Subjt:  DQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVC

A0A6A1WK89 Uncharacterized protein4.5e-0535.44Show/hide
Query:  LLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNV--PPKGCQC--IPKGFNSRICRCNVVC
        L+  L+L L  ++HS  ++K CP E  + G C  +FG S+C+    A+ G    PP  C+C  IP+      C+C+V C
Subjt:  LLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNV--PPKGCQC--IPKGFNSRICRCNVVC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAATTCATTACTGTTCCTCTTTTATCTTTTCTTCTCCTCTGCCTTGCATCCATTTCTCACTCTATTGATCAATCAAAGACATGCCCAATAGAATTTGGTTC
AATGGGAACATGTTTTGGGGTATTTGGAATCTCAGAATGCTACAGTGAAGCAATGGCAAGGTCTGGAAATGTCCCACCCAAGGGTTGCCAATGCATTCCCAAAGGCTTTA
ACTCTCGCATTTGCCGTTGCAATGTTGTTTGTCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAATTCATTACTGTTCCTCTTTTATCTTTTCTTCTCCTCTGCCTTGCATCCATTTCTCACTCTATTGATCAATCAAAGACATGCCCAATAGAATTTGGTTC
AATGGGAACATGTTTTGGGGTATTTGGAATCTCAGAATGCTACAGTGAAGCAATGGCAAGGTCTGGAAATGTCCCACCCAAGGGTTGCCAATGCATTCCCAAAGGCTTTA
ACTCTCGCATTTGCCGTTGCAATGTTGTTTGTCACTAA
Protein sequenceShow/hide protein sequence
MGKKFITVPLLSFLLLCLASISHSIDQSKTCPIEFGSMGTCFGVFGISECYSEAMARSGNVPPKGCQCIPKGFNSRICRCNVVCH