CuGenDBv2

Gene ID	Sed0011055
Organism	Sechium edule (Chayote v1)
Description	Nuclear transcription factor Y subunit B
Genome location	LG07:39930068..39934672
RNA-Seq Expression	Sed0011055
Synteny	Sed0011055
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0016602 - CCAAT-binding factor complex (cellular component) GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function) GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function) GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domains	IPR003956 - Transcription factor, NFYB/HAP3, conserved site IPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain IPR009072 - Histone-fold IPR027113 - Transcription factor NFYB/HAP3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022138908.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Momordica charantia]

1.2e-83

92.7

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFED+IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

XP_022138910.1 nuclear transcription factor Y subunit B-1-like isoform X2 [Momordica charantia]

8.5e-82

92.13

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFED+IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS QY+Q GAMTYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

XP_022138911.1 nuclear transcription factor Y subunit B-1-like isoform X3 [Momordica charantia]

4.2e-81

91.57

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFED+IDPLKSYLTRYR  ECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

XP_022957208.1 nuclear transcription factor Y subunit B-1-like isoform X1 [Cucurbita moschata]

8.0e-80

88.2

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Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSP     ESGG+QSP T    GG REQDR+LPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFE++IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGA+PGQNSQQY+Q GA+TYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

XP_038891399.1 nuclear transcription factor Y subunit B-1-like [Benincasa hispida]

8.5e-82

89.89

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Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDR+LPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFE++IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GA+TYINTQGQH+IIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CAU0 nuclear transcription factor Y subunit B-1-like isoform X2

4.1e-82

92.13

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFED+IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS QY+Q GAMTYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

A0A6J1CB30 nuclear transcription factor Y subunit B-1-like isoform X3

2.1e-81

91.57

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFED+IDPLKSYLTRYR  ECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

A0A6J1CEF2 nuclear transcription factor Y subunit B-1-like isoform X1

5.8e-84

92.7

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSPA    ESGG+QSPNT    GGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFED+IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQY+Q GAMTYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

A0A6J1KDC7 nuclear transcription factor Y subunit B-1-like isoform X1

3.9e-80

88.2

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSP     ESGG+QSP T    GG REQDR+LPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFE++IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGA+PGQNSQQY+Q GA+TYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

A0A6J1KK09 nuclear transcription factor Y subunit B-1-like isoform X3

3.9e-80

88.2

Show/hide

Query:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM
        MAE PTSP     ESGG+QSP T    GG REQDR+LPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISF+TSEASDKCQKEKRKTINGDDLLWAM
Subjt:  MAELPTSPA----ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAM

Query:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE
        ATLGFE++IDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGA+PGQNSQQY+Q GA+TYINTQGQHLIIPSMQNNE
Subjt:  ATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

SwissProt top hits

e value

%identity

Alignment

P25209 Nuclear transcription factor Y subunit B

3.0e-53

65.29

Show/hide

Query:  MAELPTSPAESGGDQ---SPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMA
        MAE P SP   GG     SP  G G G VREQDR+LPIANISRIMKKA+PANGKIAKDAK+TVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMA
Subjt:  MAELPTSPAESGGDQ---SPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMA

Query:  TLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS------QQYLQHGAMTYINTQ
        TLGFED+I+PLK YL +YRE+E D+K +++  D S K+DA+G +   +S      QQ   +  M Y+  Q
Subjt:  TLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS------QQYLQHGAMTYINTQ

Q60EQ4 Nuclear transcription factor Y subunit B-3

3.3e-52

62.15

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Query:  MAELPTSPAESGGDQSPNT----------GAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGD
        MA+ P SP   GG     +          G G GGVREQDR+LPIANISRIMKKA+PANGKIAKDAK+TVQECVSEFISFITSEASDKCQ+EKRKTINGD
Subjt:  MAELPTSPAESGGDQSPNT----------GAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGD

Query:  DLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS------QQYLQHGAMTYINTQ
        DLLWAMATLGFED+I+PLK YL +YRE+E D+K +++ GD S K+D +G+  G +S      QQ   +  M Y+  Q
Subjt:  DLLWAMATLGFEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNS------QQYLQHGAMTYINTQ

Q67XJ2 Nuclear transcription factor Y subunit B-10

3.0e-53

69.33

Show/hide

Query:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK
        ESGGDQSP     S  VREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+IDPLK
Subjt:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK

Query:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQ--QYLQHGAMT---YINTQGQHLII
         YL RYRE+E D KGS +GG+ SAKRD     P Q SQ  Q  Q G+ +   Y N+QG ++++
Subjt:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQ--QYLQHGAMT---YINTQGQHLII

Q8VYK4 Nuclear transcription factor Y subunit B-8

3.9e-53

Show/hide

Query:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK
        ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK
Subjt:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK

Query:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP
         YL RYRE+E D KGS++GGD +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Subjt:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP

Q9SLG0 Nuclear transcription factor Y subunit B-1

2.5e-52

74.31

Show/hide

Query:  MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLG
        MA+ P+SPA  GG+         G VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLG
Subjt:  MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLG

Query:  FEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQ
        FED+++PLK YL RYRELE D KGS + GD S  RDA G + G+
Subjt:  FEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G37060.1 nuclear factor Y, subunit B8

2.8e-54

Show/hide

Query:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK
        ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK
Subjt:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK

Query:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP
         YL RYRE+E D KGS++GGD +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Subjt:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP

AT2G37060.2 nuclear factor Y, subunit B8

2.8e-54

Show/hide

Query:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK
        ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK
Subjt:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK

Query:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP
         YL RYRE+E D KGS++GGD +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Subjt:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP

AT2G37060.3 nuclear factor Y, subunit B8

2.8e-54

Show/hide

Query:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK
        ESGGDQSP     S  VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+++PLK
Subjt:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK

Query:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP
         YL RYRE+E D KGS++GGD +AK+D   +  GQ SQ  L H    Y N+Q  QH+++P
Subjt:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQG-QHLIIP

AT2G38880.2 nuclear factor Y, subunit B1

1.8e-53

74.31

Show/hide

Query:  MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLG
        MA+ P+SPA  GG+         G VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLG
Subjt:  MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLG

Query:  FEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQ
        FED+++PLK YL RYRELE D KGS + GD S  RDA G + G+
Subjt:  FEDFIDPLKSYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQ

AT3G53340.1 nuclear factor Y, subunit B10

2.1e-54

69.33

Show/hide

Query:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK
        ESGGDQSP     S  VREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFED+IDPLK
Subjt:  ESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLK

Query:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQ--QYLQHGAMT---YINTQGQHLII
         YL RYRE+E D KGS +GG+ SAKRD     P Q SQ  Q  Q G+ +   Y N+QG ++++
Subjt:  SYLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQ--QYLQHGAMT---YINTQGQHLII

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAGAGCTTCCCACCAGTCCGGCCGAGAGCGGCGGCGACCAGAGCCCCAACACCGGCGCCGGCTCCGGCGGCGTTCGCGAGCAGGATCGTTACCTCCCCATCGCCAA
CATCAGTCGGATCATGAAGAAGGCCTTGCCTGCCAACGGCAAGATCGCTAAGGACGCTAAGGACACCGTCCAGGAGTGCGTCTCTGAGTTCATTAGCTTCATCACCAGCG
AGGCGAGTGATAAGTGCCAGAAGGAGAAGAGGAAGACTATTAATGGCGATGATTTGCTTTGGGCGATGGCTACGTTGGGCTTCGAGGATTTTATCGATCCCCTTAAGTCC
TACCTTACTAGGTACAGAGAGTTGGAGTGTGATGCTAAAGGATCTTCTAGGGGTGGTGACGAATCTGCTAAAAGAGACGCCGTCGGGGCCTTGCCTGGTCAAAATTCCCA
GCAGTACCTGCAGCATGGAGCAATGACCTACATTAACACTCAAGGACAACATTTGATCATTCCTTCAATGCAGAATAACGAGTAG

mRNA sequence

Show/hide mRNA sequence

AAATTCCCATAATTAGTAAAATAAAGAATGAAAAAGAAATAAAAGCCTGGTTGGTTTCTCATCTTCATCTTCTTGGTTTCTCCAGCGTCCGATCTTTGATTCTTTAAAAA
TCAAAATTTGGACCAATCCCCCATCTCCGTTTCTTTCTCTAAATTCCTCTGCGCGCCAAATACGAATTCATTCTTCAGGAACTCCCTCACATGGCAGAGCTTCCCACCAG
TCCGGCCGAGAGCGGCGGCGACCAGAGCCCCAACACCGGCGCCGGCTCCGGCGGCGTTCGCGAGCAGGATCGTTACCTCCCCATCGCCAACATCAGTCGGATCATGAAGA
AGGCCTTGCCTGCCAACGGCAAGATCGCTAAGGACGCTAAGGACACCGTCCAGGAGTGCGTCTCTGAGTTCATTAGCTTCATCACCAGCGAGGCGAGTGATAAGTGCCAG
AAGGAGAAGAGGAAGACTATTAATGGCGATGATTTGCTTTGGGCGATGGCTACGTTGGGCTTCGAGGATTTTATCGATCCCCTTAAGTCCTACCTTACTAGGTACAGAGA
GTTGGAGTGTGATGCTAAAGGATCTTCTAGGGGTGGTGACGAATCTGCTAAAAGAGACGCCGTCGGGGCCTTGCCTGGTCAAAATTCCCAGCAGTACCTGCAGCATGGAG
CAATGACCTACATTAACACTCAAGGACAACATTTGATCATTCCTTCAATGCAGAATAACGAGTAGGAGTCTCCTCCATTCACTTGGATTGCCTGAAATCTGAGGCTGGTA
GAAGCGTTCAACACCTACATAGCATCTTTACAATTGATTTGGCTAATTTACTATGAGATGATGGTATTATATATATGTGTGTGTGTGTGTGTGTATTTCTGGGGGTTTCT
GTGTTGGGTCTGGATTTGATTTTGGTTTGAGTTGGGCTTTAAGATGGGCTTCGCTTTCGTTGAATCTGTCAGCTAAAGTTATTGTAAATTTGGGACCTTCAAATTAGTAA
TTGGAAACTGGAAATATTGTTCTCTTTCTCACTTCTGTTTCTTTTGGTTTTGAATGATTAAGAAAATGATTCATATACCCTCTCCCTCCCTTTTATCATTATTTGGCTTT
CTACTCTCTCCACCCATACAAATCTTAGAAGCA

Protein sequence

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MAELPTSPAESGGDQSPNTGAGSGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDFIDPLKS
YLTRYRELECDAKGSSRGGDESAKRDAVGALPGQNSQQYLQHGAMTYINTQGQHLIIPSMQNNE

Sed0011055 (gene) of Chayote v1 genome