CuGenDBv2

Gene ID	Sed0011062
Organism	Sechium edule (Chayote v1)
Description	Helicase ATP-binding domain-containing protein
Genome location	LG12:28999420..29002399
RNA-Seq Expression	Sed0011062
Synteny	Sed0011062
Gene Ontology terms	GO:0009850 - auxin metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR036259 - MFS transporter superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588018.1 hypothetical protein SDJN03_16583, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-91

86.08

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL R+ M KSRE+G SLPT+DDPS+DDSRPID+Q QE MVRS ER ND+QSLLWRTVFAA LF FA+FLLYSI+ QVSSPWELRYHAYFME V SW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILACSFSI+GI+SKSNYHRRWLWCSFF+GFLLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

XP_022927992.1 uncharacterized protein LOC111434892 [Cucurbita moschata]

2.1e-92

86.6

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL R+ M KSRE+G SLPT+DDPS+DDSRPID+Q QE MVRS ER ND+QSLLWRTVFAA LF FA+FLLYSI+HQVSSPWELRYHAYFME V SW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILACSFSI+GI+SKSNYHRRWLWCSFF+GFLLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

XP_023002535.1 uncharacterized protein LOC111496345 [Cucurbita maxima]

1.2e-90

86.08

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL R+ M KSRE+G SLPT+DDPS+DDSRPID+Q QE MVRS ER ND+QSLLWRTVFAA LF FAVFLLYSI+ QVSSPWELRYHAYFME V SW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILACSFSI+GI+SKSNYHRRWLWCSFF+GFLLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

XP_023531869.1 uncharacterized protein LOC111794002 [Cucurbita pepo subsp. pepo]

6.9e-91

85.57

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL R+ M KSRE+G SLPT+DDPS+DDSRPID+Q QE MVRS ER +D+QSLLWRTVFAA LF FA+FLLYSI+HQVSSPWELRYHAYFME V SW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILACSFSI+GI+SKSNYHRRWLWCSFF+GFLLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

XP_038880203.1 uncharacterized protein LOC120071865 isoform X2 [Benincasa hispida]

9.3e-88

84.02

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL RI M KSR+   SLPT+DDPS+DD RPID+Q QE MVRS ER ND+QSLLWRTVFA  LF +A FLLYSIV QVSSPWELRYHAYFME VDSW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILAC+FSIVGI+SKSNYHRRWLWCSFF+G LLSVFWLYFMMSLPRFRWDVIWRPFGPLSG GICLYVDHLLA+S+EEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LYS6 Uncharacterized protein

1.4e-84

80.93

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL RI M KSR+   SLPT+DDPS DDSRPID+Q QE MVRSLER ND+QS+LWRTVFA  LF +A FLLYSI  Q+SSPWELRYHAYFME VDSW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILAC+FSI+GI+SKS++HRRWLWCSFF+G LLSVFW YFMMSLP+FRWDVIW P GPLSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

A0A1S3BQS5 uncharacterized protein LOC103492288 isoform X2

1.6e-85

81.96

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL RI M KSR++  SLPT+DDPS DD RPIDTQ QE MVRS ER ND+QSLLWRTVFA  LF +A FLLYSI+ Q+SSPWELRYHAYFME VDSW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILAC+FSIVGI+SKS++HRRWLWCSFF+G LLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL +SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

A0A5D3CE29 Uncharacterized protein

1.6e-85

81.96

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL RI M KSR++  SLPT+DDPS DD RPIDTQ QE MVRS ER ND+QSLLWRTVFA  LF +A FLLYSI+ Q+SSPWELRYHAYFME VDSW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILAC+FSIVGI+SKS++HRRWLWCSFF+G LLSVFW YFMMSLPRFRWDVIW PFGPLSGAGICLYVDHLL +SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

A0A6J1EIP3 uncharacterized protein LOC111434892

1.0e-92

86.6

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL R+ M KSRE+G SLPT+DDPS+DDSRPID+Q QE MVRS ER ND+QSLLWRTVFAA LF FA+FLLYSI+HQVSSPWELRYHAYFME V SW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILACSFSI+GI+SKSNYHRRWLWCSFF+GFLLSVFWLYFM+SLPRFRWDVIWRPFGPLSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

A0A6J1KP79 uncharacterized protein LOC111496345

5.7e-91

86.08

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Query:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW
        MAIKKL R+ M KSRE+G SLPT+DDPS+DDSRPID+Q QE MVRS ER ND+QSLLWRTVFAA LF FAVFLLYSI+ QVSSPWELRYHAYFME V SW
Subjt:  MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSW

Query:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        MIIAADWVAILACSFSI+GI+SKSNYHRRWLWCSFF+GFLLSVFWLYFM+SLPRFRWDVIWRPFG LSGAGICLYVDHLLA+SSEEIRKLRGY+
Subjt:  MIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26240.1 unknown protein

2.2e-63

60.51

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Query:  IKKLGRIFMKKSREEG---FSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDS
        +KKL R + +  R+E    F LPT +D    DSRPIDTQEQE  VR LE  + +QSL WR+VF  LL  F  FL YSI  Q  SPWELRYHAYFME + S
Subjt:  IKKLGRIFMKKSREEG---FSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDS

Query:  WMIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI
        WM+I+A+W+AI+ACS SIVG+  K N HRRW W S  VG  L++FWLY+++ LP+FRWD IW PFGPL GAGICLYVDHLL +SSEE++KLR Y+
Subjt:  WMIIAADWVAILACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYI

Sequences

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CDS sequence

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ATGGCGATCAAGAAATTAGGCAGAATTTTCATGAAGAAATCTAGAGAAGAAGGCTTCTCTCTTCCCACTAAGGACGATCCCTCCATGGACGACTCTCGTCCAATCGACAC
GCAAGAGCAAGAGGCGATGGTTCGTTCGTTGGAAAGGGAAAATGATCGACAGAGCCTCTTATGGAGGACTGTGTTTGCGGCGTTACTTTTTGGCTTTGCGGTTTTTCTTC
TTTACTCAATCGTTCACCAGGTTTCTTCTCCTTGGGAACTGCGTTATCATGCTTACTTTATGGAGTATGTTGACTCATGGATGATTATAGCTGCAGATTGGGTTGCTATT
TTAGCATGTTCATTTTCGATCGTTGGAATTATTAGCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTGTTGGCTTCCTACTATCAGTTTTCTGGTTGTA
TTTTATGATGAGTTTGCCTAGGTTTCGATGGGATGTTATCTGGCGTCCTTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGTAGATCATTTGCTAGCTCAATCAT
CAGAGGAGATAAGAAAACTTAGAGGCTATATATGTATTCTTATAAAGCTAACTGAAAACTAA

mRNA sequence

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CTCAAAACCCTTGTCAAGCTTATGATTCTTAAGATGTGACCCAGCTTTTTGAATATGAGAACTTAACCAATGGAACCAGGGCTCGAAGGACTCGGTAATGGTTCAGTCCG
CGGCTAATCCAACTTCTTCCATTTTTGCAGCCCACACAAAAGCAGATCACGGCGAGCTTTCAACACAGAGTCGATCATGGCGATCAAGAAATTAGGCAGAATTTTCATGA
AGAAATCTAGAGAAGAAGGCTTCTCTCTTCCCACTAAGGACGATCCCTCCATGGACGACTCTCGTCCAATCGACACGCAAGAGCAAGAGGCGATGGTTCGTTCGTTGGAA
AGGGAAAATGATCGACAGAGCCTCTTATGGAGGACTGTGTTTGCGGCGTTACTTTTTGGCTTTGCGGTTTTTCTTCTTTACTCAATCGTTCACCAGGTTTCTTCTCCTTG
GGAACTGCGTTATCATGCTTACTTTATGGAGTATGTTGACTCATGGATGATTATAGCTGCAGATTGGGTTGCTATTTTAGCATGTTCATTTTCGATCGTTGGAATTATTA
GCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTGTTGGCTTCCTACTATCAGTTTTCTGGTTGTATTTTATGATGAGTTTGCCTAGGTTTCGATGGGAT
GTTATCTGGCGTCCTTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGTAGATCATTTGCTAGCTCAATCATCAGAGGAGATAAGAAAACTTAGAGGCTATATATG
TATTCTTATAAAGCTAACTGAAAACTAAATTAATCCCATTTAAATCTATAATTTGTGTTATCCTCTGCTCTTACTGAACCTGATGCCATTAAAGTCCTTCGTATGCAGTA
GTATGGTATAGCTGAGATTTTTTGTTTTCATATGCATTTTTTTGTTATAAGTTTGTGTTTTTACCA

Protein sequence

Show/hide protein sequence

MAIKKLGRIFMKKSREEGFSLPTKDDPSMDDSRPIDTQEQEAMVRSLERENDRQSLLWRTVFAALLFGFAVFLLYSIVHQVSSPWELRYHAYFMEYVDSWMIIAADWVAI
LACSFSIVGIISKSNYHRRWLWCSFFVGFLLSVFWLYFMMSLPRFRWDVIWRPFGPLSGAGICLYVDHLLAQSSEEIRKLRGYICILIKLTEN

Sed0011062 (gene) of Chayote v1 genome