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Sed0011087 (gene) of Chayote v1 genome

Gene IDSed0011087
OrganismSechium edule (Chayote v1)
DescriptionPhloem filament protein
Genome locationLG10:33139845..33140557
RNA-Seq ExpressionSed0011087
SyntenySed0011087
Gene Ontology termsGO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
InterPro domainsIPR009994 - Phloem filament PP1
IPR027214 - Cystatin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAC12676.1 phloem filament protein [Cucurbita maxima]1.2e-0839.81Show/hide
Query:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE
        GH      P Q  KW  I DL    VQ+V+KFA+ E+N    G  L Y      WY E+   ++K RLH++     GR  N+EAIV  K     + KILE
Subjt:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE

Query:  SFR
        SF+
Subjt:  SFR

KAG6607542.1 hypothetical protein SDJN03_00884, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1549.48Show/hide
Query:  MTIGLGFGFHLGLRDHHGHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTE
        MTIGL  G +LG  DHHG  R G   C  GKW  I +L S C+Q++++FAV+E+N + +  NLTY+   AAWY EV+  S+K RLHIQVA+     E
Subjt:  MTIGLGFGFHLGLRDHHGHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTE

KAG6607543.1 hypothetical protein SDJN03_00885, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1644.17Show/hide
Query:  IGLGFGFHLGLRDHHGHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAI
        +GLG GF+LG  D     +P C  C   KW  I DLG  C+  VAKFA++EH+  H   N   +     WY E++  S+K RLHI+V+   G    HE I
Subjt:  IGLGFGFHLGLRDHHGHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAI

Query:  VHEKNTECGRNKILESFRRL
        V EK  ECGR + LESFR +
Subjt:  VHEKNTECGRNKILESFRRL

XP_022989566.1 uncharacterized protein LOC111486626 isoform X1 [Cucurbita maxima]8.8e-0940Show/hide
Query:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE
        GH      P Q  KW  I DL    VQ+V+KFA+ E+N    G  L Y      WY E+   ++K RLH++     GR  N+EAIV  K     + KILE
Subjt:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE

Query:  SFRRL
        SF+ L
Subjt:  SFRRL

XP_022989567.1 uncharacterized protein LOC111486626 isoform X2 [Cucurbita maxima]8.8e-0940Show/hide
Query:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE
        GH      P Q  KW  I DL    VQ+V+KFA+ E+N    G  L Y      WY E+   ++K RLH++     GR  N+EAIV  K     + KILE
Subjt:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE

Query:  SFRRL
        SF+ L
Subjt:  SFRRL

TrEMBL top hitse value%identityAlignment
A0A6J1EIQ8 uncharacterized protein LOC1114345172.3e-0739.33Show/hide
Query:  KWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESF
        KW  I D+   C+Q VAKFAV++ N++H G  L Y      WY E+ + +LK RLHI+     GR   +E +V E+  +  R + L SF
Subjt:  KWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESF

A0A6J1ELQ9 uncharacterized protein LOC1114345155.2e-0737.63Show/hide
Query:  QAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFR
        Q  KW  I ++    VQ++AKFAV EHN+K  G  L Y      W+ ++   ++K RLH++     GR  ++EA+V  ++    R KILESF+
Subjt:  QAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFR

A0A6J1JG70 uncharacterized protein LOC111486626 isoform X24.3e-0940Show/hide
Query:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE
        GH      P Q  KW  I DL    VQ+V+KFA+ E+N    G  L Y      WY E+   ++K RLH++     GR  N+EAIV  K     + KILE
Subjt:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE

Query:  SFRRL
        SF+ L
Subjt:  SFRRL

A0A6J1JKF7 uncharacterized protein LOC111486626 isoform X14.3e-0940Show/hide
Query:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE
        GH      P Q  KW  I DL    VQ+V+KFA+ E+N    G  L Y      WY E+   ++K RLH++     GR  N+EAIV  K     + KILE
Subjt:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE

Query:  SFRRL
        SF+ L
Subjt:  SFRRL

P94012 Phloem filament protein5.6e-0939.81Show/hide
Query:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE
        GH      P Q  KW  I DL    VQ+V+KFA+ E+N    G  L Y      WY E+   ++K RLH++     GR  N+EAIV  K     + KILE
Subjt:  GHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILE

Query:  SFR
        SF+
Subjt:  SFR

SwissProt top hitse value%identityAlignment
P86472 Cysteine proteinase inhibitor 18.0e-0541.49Show/hide
Query:  AGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFRRL
        AG W  I +L S+ VQDVA+FAV EHN K     L Y+ ++   YT+V  G+   RL I  A+      N+EA+V +K     RN  L SFR++
Subjt:  AGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFRRL

Q6TPK4 Cysteine proteinase inhibitor 11.1e-0441.49Show/hide
Query:  AGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFRRL
        AG W  I  L S+ VQDVA+FAV EHN K     L Y+ ++   YT+V  G+   RL I  A+      N+EA+V +K     RN  L SFR++
Subjt:  AGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTECGRNKILESFRRL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATCGGATTAGGATTTGGCTTCCATCTTGGTTTGCGCGATCACCATGGTCATCGGCGACCGGGGTGCCAACCATGTCAAGCTGGGAAATGGGAAGTGATCACCGA
TCTCGGGTCGTCGTGCGTTCAAGATGTTGCGAAGTTCGCGGTGCAAGAACACAACAGTAAACATTGGGGATTAAACTTGACATACAGGCACACAATTGCAGCTTGGTACA
CTGAAGTGGAGAATGGAAGCTTGAAGTTACGTCTCCATATTCAAGTTGCACGTTCTTGTGGACGTACTGAAAACCATGAAGCTATTGTGCATGAAAAGAACACCGAATGT
GGGAGAAACAAGATACTTGAATCATTCAGGCGTCTGTAG
mRNA sequenceShow/hide mRNA sequence
CAACTACTAAACAAAACAAAACAAGCCATCACAAACACTTGTTTCATATAAAACAATCCCAAAGGCTACGATATGACTATCGGATTAGGATTTGGCTTCCATCTTGGTTT
GCGCGATCACCATGGTCATCGGCGACCGGGGTGCCAACCATGTCAAGCTGGGAAATGGGAAGTGATCACCGATCTCGGGTCGTCGTGCGTTCAAGATGTTGCGAAGTTCG
CGGTGCAAGAACACAACAGTAAACATTGGGGATTAAACTTGACATACAGGCACACAATTGCAGCTTGGTACACTGAAGTGGAGAATGGAAGCTTGAAGTTACGTCTCCAT
ATTCAAGTTGCACGTTCTTGTGGACGTACTGAAAACCATGAAGCTATTGTGCATGAAAAGAACACCGAATGTGGGAGAAACAAGATACTTGAATCATTCAGGCGTCTGTA
GAGAAGTTACAAAAATTTCTCTTTTAAAATTCATCATATCTATATATGCCACTCATGTTGTATTGGATTTGATGATCTAAGTTTAATATACAATCAAAATAAACCTTATT
ATATAGCTAATCGTCTCTCTATGGTCAAAGTATTTATCATCAATATGTTGTTGCTTTCCTACTGATATATTCCCATAACTATAAATTTGTTTTGTTCGGAGATAGATTTT
ACGGTTATCTTGTTTGGTGGTAATCCATTTTAATAGCATTTGGTCTTTATTAG
Protein sequenceShow/hide protein sequence
MTIGLGFGFHLGLRDHHGHRRPGCQPCQAGKWEVITDLGSSCVQDVAKFAVQEHNSKHWGLNLTYRHTIAAWYTEVENGSLKLRLHIQVARSCGRTENHEAIVHEKNTEC
GRNKILESFRRL