; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011090 (gene) of Chayote v1 genome

Gene IDSed0011090
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationLG01:10851935..10852743
RNA-Seq ExpressionSed0011090
SyntenySed0011090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34063.1 hypothetical protein [Cucumis melo subsp. melo]1.3e-2071.74Show/hide
Query:  GGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGG----GGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGN
        GGGGGGGGGGG NSV GGEAYGHGSGFGGGGG+ GGG+GGGGG    GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S     NGHGSGFGGG+GN
Subjt:  GGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGG----GGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGN

Query:  GTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA
        G GGGG GG GGG G S S+GG+GKGEG G GG    G GMGMGFGMGFGMG+GFGMG      N+NG YD  N+  K KT  A
Subjt:  GTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA

KGN64507.1 hypothetical protein Csa_013094 [Cucumis sativus]3.1e-1970.1Show/hide
Query:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVN-GGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGN--GHGSGFGGGI
        GG GGGGGGGGGGG NSVWGGEAYGHGSGFGGGGG   GGG GGGG GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S +N G+  G GSGFGGG+
Subjt:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVN-GGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGN--GHGSGFGGGI

Query:  GNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN----------GGGMGMGFGMGFGMGMGFGMGNS----NGVYDSNNNNVKDKTTAA
        GNG GGGG GG GGG G S S+GG+GKGEG GFG G GN          G GMGMGFGMGFGMG+GFGMGNS    NG  D  N+  K KT  +
Subjt:  GNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN----------GGGMGMGFGMGFGMGMGFGMGNS----NGVYDSNNNNVKDKTTAA

XP_008446350.1 PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]2.0e-1050.95Show/hide
Query:  IATGIGGDVDPSLGGQLLAEEVEVVAAEEEEIQWVGLGPAMVKVMELGSVLVVMVVVEEVVAVGVKVAAMVTAKEWDLVQGGEGGGGGGGGGGGDNSVWG
        I  GIGGDV+PSL GQL +  +EVV   E                         VV E +  +GV                        G G G+     
Subjt:  IATGIGGDVDPSLGGQLLAEEVEVVAAEEEEIQWVGLGPAMVKVMELGSVLVVMVVVEEVVAVGVKVAAMVTAKEWDLVQGGEGGGGGGGGGGGDNSVWG

Query:  GEAYGHGSGFGGGGGVNGGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGNGTGGGGSGGGGGGSGGSGSSG
            G+G+GFG GGG  GGG GGGG GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S     NGHGSGFGGG+GNG GGGG GG GGG G S S+G
Subjt:  GEAYGHGSGFGGGGGVNGGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGNGTGGGGSGGGGGGSGGSGSSG

Query:  GFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA
        G+GKGEG G GG    G GMGMGFGMGFGMG+GFGMG      N+NG YD  N+  K KT  A
Subjt:  GFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA

XP_011648420.1 glycine-rich protein DOT1 [Cucumis sativus]3.1e-1970.1Show/hide
Query:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVN-GGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGN--GHGSGFGGGI
        GG GGGGGGGGGGG NSVWGGEAYGHGSGFGGGGG   GGG GGGG GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S +N G+  G GSGFGGG+
Subjt:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVN-GGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGN--GHGSGFGGGI

Query:  GNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN----------GGGMGMGFGMGFGMGMGFGMGNS----NGVYDSNNNNVKDKTTAA
        GNG GGGG GG GGG G S S+GG+GKGEG GFG G GN          G GMGMGFGMGFGMG+GFGMGNS    NG  D  N+  K KT  +
Subjt:  GNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN----------GGGMGMGFGMGFGMGMGFGMGNS----NGVYDSNNNNVKDKTTAA

XP_023520206.1 glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo]4.6e-1062.12Show/hide
Query:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFG-GGGGVNGGGSGGGGGGGGGSNGGN--------GYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGS
        GG GGGGGGG GGG +     E  GHGSG+G GGGG   GG GGGGGGGGG  GGN        G+GSGFGGG G G GG GGGGGGGS G+N GNG+GS
Subjt:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFG-GGGGVNGGGSGGGGGGGGGSNGGN--------GYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGS

Query:  GFGGGIG-NGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSG-----------NGGGMGMGFGMGFGMGMGFGMGNSNGVYDSNNNNVKDKTTAA
        GFGGG+G  G+G GG GGGGGG G SG +GG+GKGEGGGFGGG G            G GMGMGFGMGFGMG+GFGMGN+N   D +N   + K T A
Subjt:  GFGGGIG-NGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSG-----------NGGGMGMGFGMGFGMGMGFGMGNSNGVYDSNNNNVKDKTTAA

TrEMBL top hitse value%identityAlignment
A0A0A0LUS3 Uncharacterized protein1.5e-1970.1Show/hide
Query:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVN-GGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGN--GHGSGFGGGI
        GG GGGGGGGGGGG NSVWGGEAYGHGSGFGGGGG   GGG GGGG GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S +N G+  G GSGFGGG+
Subjt:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVN-GGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGN--GHGSGFGGGI

Query:  GNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN----------GGGMGMGFGMGFGMGMGFGMGNS----NGVYDSNNNNVKDKTTAA
        GNG GGGG GG GGG G S S+GG+GKGEG GFG G GN          G GMGMGFGMGFGMG+GFGMGNS    NG  D  N+  K KT  +
Subjt:  GNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN----------GGGMGMGFGMGFGMGMGFGMGNS----NGVYDSNNNNVKDKTTAA

A0A1S3BEV5 putative glycine-rich cell wall structural protein 19.9e-1150.95Show/hide
Query:  IATGIGGDVDPSLGGQLLAEEVEVVAAEEEEIQWVGLGPAMVKVMELGSVLVVMVVVEEVVAVGVKVAAMVTAKEWDLVQGGEGGGGGGGGGGGDNSVWG
        I  GIGGDV+PSL GQL +  +EVV   E                         VV E +  +GV                        G G G+     
Subjt:  IATGIGGDVDPSLGGQLLAEEVEVVAAEEEEIQWVGLGPAMVKVMELGSVLVVMVVVEEVVAVGVKVAAMVTAKEWDLVQGGEGGGGGGGGGGGDNSVWG

Query:  GEAYGHGSGFGGGGGVNGGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGNGTGGGGSGGGGGGSGGSGSSG
            G+G+GFG GGG  GGG GGGG GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S     NGHGSGFGGG+GNG GGGG GG GGG G S S+G
Subjt:  GEAYGHGSGFGGGGGVNGGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGNGTGGGGSGGGGGGSGGSGSSG

Query:  GFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA
        G+GKGEG G GG    G GMGMGFGMGFGMG+GFGMG      N+NG YD  N+  K KT  A
Subjt:  GFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA

A0A5D3BJP2 Uncharacterized protein6.2e-2171.74Show/hide
Query:  GGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGG----GGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGN
        GGGGGGGGGGG NSV GGEAYGHGSGFGGGGG+ GGG+GGGGG    GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S     NGHGSGFGGG+GN
Subjt:  GGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGG----GGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGN

Query:  GTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA
        G GGGG GG GGG G S S+GG+GKGEG G GG    G GMGMGFGMGFGMG+GFGMG      N+NG YD  N+  K KT  A
Subjt:  GTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA

A0A6J1KJ79 glycine-rich cell wall structural protein 1-like3.8e-1063.4Show/hide
Query:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGGGGGGSN--GGN--GYGSGF--GGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFG
        GG GGGGGGGGGGG     GG  YG G GFG G G  GGG GGGGGGGGG++  GG   G+GSGF  GGG+G G  GGGGGGGGGS G+N GNG+GSGFG
Subjt:  GGEGGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGGGGGGSN--GGN--GYGSGF--GGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFG

Query:  GGIGNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSG-----------NGGGMGMGFGMGFGMGMGFGMGNSNGVYDSNNNNVKDKTTAA
        GG+G G  G G GGGGGG G SG  GG+GKGEGGGFGGG G            G GMGMGFGMGFGMG+GFGMGN+N   D +N   + KTT A
Subjt:  GGIGNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSG-----------NGGGMGMGFGMGFGMGMGFGMGNSNGVYDSNNNNVKDKTTAA

E5GC64 Uncharacterized protein6.2e-2171.74Show/hide
Query:  GGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGG----GGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGN
        GGGGGGGGGGG NSV GGEAYGHGSGFGGGGG+ GGG+GGGGG    GGGG+NGGNGYGSGFGGG+GSG  GGGGGGGGG S     NGHGSGFGGG+GN
Subjt:  GGGGGGGGGGGDNSVWGGEAYGHGSGFGGGGGVNGGGSGGGGG----GGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGN

Query:  GTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA
        G GGGG GG GGG G S S+GG+GKGEG G GG    G GMGMGFGMGFGMG+GFGMG      N+NG YD  N+  K KT  A
Subjt:  GTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGNGGGMGMGFGMGFGMGMGFGMG------NSNGVYDSNNNNVKDKTTAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGACGATTGCCACCGGTATTGGCGGGGATGTGGATCCTTCTTTGGGTGGCCAGCTTCTGGCGGAGGAGGTGGAGGTGGTGGCGGCGGAGGAGGAGGAAATTCA
ATGGGTGGGGCTGGGTCCGGCCATGGTGAAGGTTATGGAGCTGGGTTCGGTGCTGGTAGTAATGGTGGTGGTGGAGGAGGTGGTGGCGGTGGGAGTGAAGGTGGCAGCAA
TGGTTACGGCCAAGGAATGGGATTTGGTGCAGGGCGGAGAGGGTGGTGGAGGGGGCGGCGGCGGAGGAGGTGGCGATAATTCTGTTTGGGGAGGGGAGGCGTATGGTCAT
GGAAGTGGGTTTGGGGGAGGTGGAGGTGTAAATGGCGGCGGCAGTGGCGGCGGTGGTGGTGGAGGAGGAGGGTCAAATGGAGGAAATGGTTATGGAAGTGGTTTTGGCGG
CGGCATGGGTAGTGGGATAGGAGGAGGAGGAGGCGGTGGCGGTGGAGGAAGTAGTGGATCAAACAGAGGAAATGGTCATGGTAGTGGTTTTGGTGGCGGAATAGGCAATG
GAACAGGCGGCGGCGGCAGTGGAGGAGGTGGTGGCGGTAGTGGAGGAAGTGGTTCAAGTGGAGGATTTGGAAAAGGAGAGGGCGGTGGATTTGGTGGCGGCAGCGGAAAC
GGAGGAGGCATGGGAATGGGATTTGGAATGGGCTTTGGGATGGGAATGGGCTTTGGAATGGGAAACAGCAATGGAGTTTATGACTCCAACAATAATAATGTCAAAGATAA
AACAACGGCAGCTGCCCAACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGACGACGATTGCCACCGGTATTGGCGGGGATGTGGATCCTTCTTTGGGTGGCCAGCTTCTGGCGGAGGAGGTGGAGGTGGTGGCGGCGGAGGAGGAGGAAATTCA
ATGGGTGGGGCTGGGTCCGGCCATGGTGAAGGTTATGGAGCTGGGTTCGGTGCTGGTAGTAATGGTGGTGGTGGAGGAGGTGGTGGCGGTGGGAGTGAAGGTGGCAGCAA
TGGTTACGGCCAAGGAATGGGATTTGGTGCAGGGCGGAGAGGGTGGTGGAGGGGGCGGCGGCGGAGGAGGTGGCGATAATTCTGTTTGGGGAGGGGAGGCGTATGGTCAT
GGAAGTGGGTTTGGGGGAGGTGGAGGTGTAAATGGCGGCGGCAGTGGCGGCGGTGGTGGTGGAGGAGGAGGGTCAAATGGAGGAAATGGTTATGGAAGTGGTTTTGGCGG
CGGCATGGGTAGTGGGATAGGAGGAGGAGGAGGCGGTGGCGGTGGAGGAAGTAGTGGATCAAACAGAGGAAATGGTCATGGTAGTGGTTTTGGTGGCGGAATAGGCAATG
GAACAGGCGGCGGCGGCAGTGGAGGAGGTGGTGGCGGTAGTGGAGGAAGTGGTTCAAGTGGAGGATTTGGAAAAGGAGAGGGCGGTGGATTTGGTGGCGGCAGCGGAAAC
GGAGGAGGCATGGGAATGGGATTTGGAATGGGCTTTGGGATGGGAATGGGCTTTGGAATGGGAAACAGCAATGGAGTTTATGACTCCAACAATAATAATGTCAAAGATAA
AACAACGGCAGCTGCCCAACCTTAG
Protein sequenceShow/hide protein sequence
MTTTIATGIGGDVDPSLGGQLLAEEVEVVAAEEEEIQWVGLGPAMVKVMELGSVLVVMVVVEEVVAVGVKVAAMVTAKEWDLVQGGEGGGGGGGGGGGDNSVWGGEAYGH
GSGFGGGGGVNGGGSGGGGGGGGGSNGGNGYGSGFGGGMGSGIGGGGGGGGGGSSGSNRGNGHGSGFGGGIGNGTGGGGSGGGGGGSGGSGSSGGFGKGEGGGFGGGSGN
GGGMGMGFGMGFGMGMGFGMGNSNGVYDSNNNNVKDKTTAAAQP