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Sed0011103 (gene) of Chayote v1 genome

Gene IDSed0011103
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:32164044..32164490
RNA-Seq ExpressionSed0011103
SyntenySed0011103
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064635.1 hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]3.9e-1141.36Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII
        M+MMQAKRR    R  + + ++T  T  +   + +T + QTKK   SN N E ++  S         TL P   KT+    +P  AARV MLK K+G  I
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII

Query:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM
         KA+  +S+ DS++      +A K CSIQE+R+A+RE+L+ IK   DFNENLD+MR+F +L+
Subjt:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM

KAE8647905.1 hypothetical protein Csa_000421, partial [Cucumis sativus]1.1e-0837.89Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTK--KPNYSNGNFEASQLRST------LPPKTSTSSSTPANAARVAMLKAKYGGIIAKAKC
        MKMMQ KRR       + +    +STKV    KP+   Q K  K +    NF+    +        + P T+    +P  AARV +LKAK+G  I KA+ 
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTK--KPNYSNGNFEASQLRST------LPPKTSTSSSTPANAARVAMLKAKYGGIIAKAKC

Query:  AV-SSDSDLD---------ASKTCSI-QERRQAAREALNNIKQTVDFNENLDAMREFNKLM
         + +S++D +           KTCSI QE+++A+REAL+ I    DFNENLD+MREF K++
Subjt:  AV-SSDSDLD---------ASKTCSI-QERRQAAREALNNIKQTVDFNENLDAMREFNKLM

KAE8647906.1 hypothetical protein Csa_000254, partial [Cucumis sativus]7.9e-0437.4Show/hide
Query:  KPHTPVQTKKPNYSNGNFEASQLRSTLP-----------PKTSTSSSTPANAARVAMLKAKYGGIIAKAKCAV-SSDSDLD---------ASKTCSI-QE
        KP+   Q K+   SNG+ E +  +   P           P T+    +P  AARV +LKAK+G  I KA+  +  S++D +           KTCSI QE
Subjt:  KPHTPVQTKKPNYSNGNFEASQLRSTLP-----------PKTSTSSSTPANAARVAMLKAKYGGIIAKAKCAV-SSDSDLD---------ASKTCSI-QE

Query:  RRQAAREALNN-IKQTVDFNENLDAMREFNK
        +++A+REAL+  I    DFNENLD+M+EF +
Subjt:  RRQAAREALNN-IKQTVDFNENLDAMREFNK

KGN61401.2 hypothetical protein Csa_006690, partial [Cucumis sativus]5.3e-0836.65Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTKKPNYSN--GNFEASQLRST------LPPKTSTSSSTPANAARVAMLKAKYGGIIAKAKC
        MKMMQ KRR       + +    +STKV    KP+   Q K+ N      NF+    +        + P T+    +P  AARV +LKAK+G  I KA+ 
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTKKPNYSN--GNFEASQLRST------LPPKTSTSSSTPANAARVAMLKAKYGGIIAKAKC

Query:  AV-SSDSDLD---------ASKTCSI-QERRQAAREALNNIKQTVDFNENLDAMREFNKLM
         + +S++D +           K CSI QE+++A+REAL+ I    +FNENLD+MREF K++
Subjt:  AV-SSDSDLD---------ASKTCSI-QERRQAAREALNNIKQTVDFNENLDAMREFNKLM

TYK19957.1 hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]3.9e-1141.36Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII
        M+MMQAKRR    R  + + ++T  T  +   + +T + QTKK   SN N E ++  S         TL P   KT+    +P  AARV MLK K+G  I
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII

Query:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM
         KA+  +S+ DS++      +A K CSIQE+R+A+RE+L+ IK   DFNENLD+MR+F +L+
Subjt:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ1 Uncharacterized protein1.1e-0636.81Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTKKPNYSNGNFEASQLRSTLP-----------PKTSTSSSTPANAARVAMLKAKYGGIIAK
        M+MMQ KRR       + +    +STKV    KP+   Q K+   SNG+ E +  +   P           P T+    +P  AARV +LKAK+G  I K
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTKKPNYSNGNFEASQLRSTLP-----------PKTSTSSSTPANAARVAMLKAKYGGIIAK

Query:  AKCAV-SSDSDLD---------ASKTCSI-QERRQAAREALNN-IKQTVDFNENLDAMREFNK
        A+  +  S++D +           KTCSI QE+++A+REAL+  I    DFNENLD+M+EF +
Subjt:  AKCAV-SSDSDLD---------ASKTCSI-QERRQAAREALNN-IKQTVDFNENLDAMREFNK

A0A0A0KRB6 Uncharacterized protein1.1e-0641.6Show/hide
Query:  PHTPVQTKKPN--YSNGNFEASQLR---STLPPKTST-SSSTPANAARVAMLKAKYGGIIAKAKCAVSSDSDLDASK----------TCSIQERRQAARE
        P+   Q K+ N  +   NF+    +   + LP K +T    +P  AARV +LKAK+G  I KA+  +  +S+ D++K           CSIQE+RQA RE
Subjt:  PHTPVQTKKPN--YSNGNFEASQLR---STLPPKTST-SSSTPANAARVAMLKAKYGGIIAKAKCAVSSDSDLDASK----------TCSIQERRQAARE

Query:  ALNNIKQTVDFNENLDAMREFNKLM
        AL+ I    DFNENLD+MREF KL+
Subjt:  ALNNIKQTVDFNENLDAMREFNKLM

A0A5A7VFH7 Uncharacterized protein1.9e-1141.36Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII
        M+MMQAKRR    R  + + ++T  T  +   + +T + QTKK   SN N E ++  S         TL P   KT+    +P  AARV MLK K+G  I
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII

Query:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM
         KA+  +S+ DS++      +A K CSIQE+R+A+RE+L+ IK   DFNENLD+MR+F +L+
Subjt:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM

A0A5D3D8Q3 Uncharacterized protein1.9e-1141.36Show/hide
Query:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII
        M+MMQAKRR    R  + + ++T  T  +   + +T + QTKK   SN N E ++  S         TL P   KT+    +P  AARV MLK K+G  I
Subjt:  MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPV-QTKKPNYSNGNFEASQLRS---------TLPP---KTSTSSSTPANAARVAMLKAKYGGII

Query:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM
         KA+  +S+ DS++      +A K CSIQE+R+A+RE+L+ IK   DFNENLD+MR+F +L+
Subjt:  AKAKCAVSS-DSDL------DASKTCSIQERRQAAREALNNIKQTVDFNENLDAMREFNKLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATGCAAGCAAAACGAAGATCCACGGCAGCTCGTCGTTGTCGTTCACGCCCCATGAATACTGTTTCGACCAAGGTTATAGCCATCTTCAAACCTCACACTCC
TGTTCAAACAAAGAAGCCTAATTATAGTAATGGTAATTTTGAGGCATCTCAACTTAGAAGTACTCTACCACCAAAGACAAGTACGTCGTCGTCAACGCCCGCAAATGCTG
CTCGAGTAGCCATGCTGAAAGCCAAATATGGTGGTATCATTGCCAAAGCTAAGTGCGCGGTTTCCTCCGATTCGGATCTTGATGCTTCGAAGACATGCTCGATACAAGAA
CGAAGGCAGGCTGCAAGAGAAGCCCTAAACAACATTAAACAAACAGTTGATTTCAACGAGAATCTTGATGCTATGAGAGAGTTTAATAAACTAATGGGACTAGAGATGAG
AGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATGCAAGCAAAACGAAGATCCACGGCAGCTCGTCGTTGTCGTTCACGCCCCATGAATACTGTTTCGACCAAGGTTATAGCCATCTTCAAACCTCACACTCC
TGTTCAAACAAAGAAGCCTAATTATAGTAATGGTAATTTTGAGGCATCTCAACTTAGAAGTACTCTACCACCAAAGACAAGTACGTCGTCGTCAACGCCCGCAAATGCTG
CTCGAGTAGCCATGCTGAAAGCCAAATATGGTGGTATCATTGCCAAAGCTAAGTGCGCGGTTTCCTCCGATTCGGATCTTGATGCTTCGAAGACATGCTCGATACAAGAA
CGAAGGCAGGCTGCAAGAGAAGCCCTAAACAACATTAAACAAACAGTTGATTTCAACGAGAATCTTGATGCTATGAGAGAGTTTAATAAACTAATGGGACTAGAGATGAG
AGTATAG
Protein sequenceShow/hide protein sequence
MKMMQAKRRSTAARRCRSRPMNTVSTKVIAIFKPHTPVQTKKPNYSNGNFEASQLRSTLPPKTSTSSSTPANAARVAMLKAKYGGIIAKAKCAVSSDSDLDASKTCSIQE
RRQAAREALNNIKQTVDFNENLDAMREFNKLMGLEMRV