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Sed0011116 (gene) of Chayote v1 genome

Gene IDSed0011116
OrganismSechium edule (Chayote v1)
Descriptionfibrous sheath CABYR-binding protein-like
Genome locationLG05:7823526..7824890
RNA-Seq ExpressionSed0011116
SyntenySed0011116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604898.1 hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1158.6Show/hide
Query:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVV--EEEETEPKEEVKEE--------------EETKPE
        MATAEVVT E AL EE TEV+VPP KVEEEA    D PAEE A   A E  E PVEVETKEVV   EEEE E KEEV EE              EE   E
Subjt:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVV--EEEETEPKEEVKEE--------------EETKPE

Query:  AEPAV----------EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE
        +EPAV          EEE KPEAEPA EE+  E +E   E AEEKPAE+EPAAEKAE
Subjt:  AEPAV----------EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE

XP_004140479.1 cilia- and flagella-associated protein 251 [Cucumis sativus]2.0e-1160.53Show/hide
Query:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK--------EEVKEEEE
        MATAEVVTPE ALPEEAT   EVEVPPPKVEEE  P   E D PAEE A        PA EE ETPVEVETKEVVVEEE  E K        EE KEE +
Subjt:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK--------EEVKEEEE

Query:  TKPEAEPAVEEETKPEA----EPAVEEKPAEEEEEAAEEKPAEDEPAAEKAE
        T+  AE  VEEETK       E AVE KPAEE EE AEE     E  AEK E
Subjt:  TKPEAEPAVEEETKPEA----EPAVEEKPAEEEEEAAEEKPAEDEPAAEKAE

XP_022947684.1 enolase-phosphatase E1-like [Cucurbita moschata]1.1e-0959.6Show/hide
Query:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVV-EEEETEPKEEVKEE--------------EETKPEA
        MATAEVVT E AL EE TEVEVPP KVEEEA      PAEE A   A E  E PV VETKEVV  EEEE E KEEV EE              EE   E+
Subjt:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVV-EEEETEPKEEVKEE--------------EETKPEA

Query:  EPAV-----EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE
        EPAV     EEE KPEAEPA EE+  E +E   E AEEKPAE+E AAEKAE
Subjt:  EPAV-----EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE

XP_022971120.1 fibrous sheath CABYR-binding protein-like [Cucurbita maxima]7.2e-1461.18Show/hide
Query:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVVEEEETEPKEEVKEE--------------EETKPEAE
        MATAEVVT E AL EE TEVEVPP KVEEEA   +D PAEE A   A E  E PVEVETKEVV +EEE E KEEV EE              EE   E+E
Subjt:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVVEEEETEPKEEVKEE--------------EETKPEAE

Query:  PAV-------EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE
        PAV       EEE KPEAEPA EE+ AE +E   E AEEKPAE+EPAAEKAE
Subjt:  PAV-------EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE

XP_038900947.1 cytochrome c1-like [Benincasa hispida]1.2e-1364.19Show/hide
Query:  MATAEVVTPEIALPEEATE-VEVPPPKVEEEAQPES---DTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPKEEVKEEEETKPEA-EPAV
        MATAEVV PE  LPEEATE VEVPPPKVEEE  P     D PAEE A        PA EETETPVEVETKEVVVEE   EPKEE KEEEE + EA E  V
Subjt:  MATAEVVTPEIALPEEATE-VEVPPPKVEEEAQPES---DTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPKEEVKEEEETKPEA-EPAV

Query:  EEETKP---------EAEPAVEEKPAEEEEEAAEEKPAEDEPAAEKAE
        EEE+KP         EA   VEEKP EE     EEKP E+EPAAEKAE
Subjt:  EEETKP---------EAEPAVEEKPAEEEEEAAEEKPAEDEPAAEKAE

TrEMBL top hitse value%identityAlignment
A0A0A0KAS3 Uncharacterized protein9.5e-1260.53Show/hide
Query:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK--------EEVKEEEE
        MATAEVVTPE ALPEEAT   EVEVPPPKVEEE  P   E D PAEE A        PA EE ETPVEVETKEVVVEEE  E K        EE KEE +
Subjt:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK--------EEVKEEEE

Query:  TKPEAEPAVEEETKPEA----EPAVEEKPAEEEEEAAEEKPAEDEPAAEKAE
        T+  AE  VEEETK       E AVE KPAEE EE AEE     E  AEK E
Subjt:  TKPEAEPAVEEETKPEA----EPAVEEKPAEEEEEAAEEKPAEDEPAAEKAE

A0A1S3C239 patellin-1-like1.2e-0957.42Show/hide
Query:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK-------EEVKEEEET
        MATAEVVTP+ A+PEEAT   EVEVP PKVEEE  P   E+D PAEE A        PA EETETPVE ETKEVVVEEE  E K       EE KEE++T
Subjt:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK-------EEVKEEEET

Query:  KPEAEPAVEEETK-PEAEPAVEEKPAEEEEEAAEEKPA-------EDEPAAEKAE
        +  AE AV EETK  EAE  VEE+  E+  E  EEKP        E+E  AEKAE
Subjt:  KPEAEPAVEEETK-PEAEPAVEEKPAEEEEEAAEEKPA-------EDEPAAEKAE

A0A5A7UC23 Patellin-1-like1.2e-0957.42Show/hide
Query:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK-------EEVKEEEET
        MATAEVVTP+ A+PEEAT   EVEVP PKVEEE  P   E+D PAEE A        PA EETETPVE ETKEVVVEEE  E K       EE KEE++T
Subjt:  MATAEVVTPEIALPEEAT---EVEVPPPKVEEEAQP---ESDTPAEEAA--------PATEETETPVEVETKEVVVEEEETEPK-------EEVKEEEET

Query:  KPEAEPAVEEETK-PEAEPAVEEKPAEEEEEAAEEKPA-------EDEPAAEKAE
        +  AE AV EETK  EAE  VEE+  E+  E  EEKP        E+E  AEKAE
Subjt:  KPEAEPAVEEETK-PEAEPAVEEKPAEEEEEAAEEKPA-------EDEPAAEKAE

A0A6J1G7J6 enolase-phosphatase E1-like5.2e-1059.6Show/hide
Query:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVV-EEEETEPKEEVKEE--------------EETKPEA
        MATAEVVT E AL EE TEVEVPP KVEEEA      PAEE A   A E  E PV VETKEVV  EEEE E KEEV EE              EE   E+
Subjt:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVV-EEEETEPKEEVKEE--------------EETKPEA

Query:  EPAV-----EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE
        EPAV     EEE KPEAEPA EE+  E +E   E AEEKPAE+E AAEKAE
Subjt:  EPAV-----EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE

A0A6J1I4V1 fibrous sheath CABYR-binding protein-like3.5e-1461.18Show/hide
Query:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVVEEEETEPKEEVKEE--------------EETKPEAE
        MATAEVVT E AL EE TEVEVPP KVEEEA   +D PAEE A   A E  E PVEVETKEVV +EEE E KEEV EE              EE   E+E
Subjt:  MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAA--PATEETETPVEVETKEVVVEEEETEPKEEVKEE--------------EETKPEAE

Query:  PAV-------EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE
        PAV       EEE KPEAEPA EE+ AE +E   E AEEKPAE+EPAAEKAE
Subjt:  PAV-------EEETKPEAEPAVEEKPAEEEE---EAAEEKPAEDEPAAEKAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGCAGAGGTTGTAACACCAGAGATCGCTCTCCCAGAAGAAGCAACAGAGGTGGAGGTACCGCCGCCGAAGGTGGAAGAAGAGGCTCAGCCCGAATCAGATAC
ACCGGCAGAGGAGGCGGCACCGGCAACCGAAGAGACAGAAACTCCTGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAAGAAACAGAGCCAAAGGAAGAGGTTA
AAGAAGAAGAAGAGACCAAACCAGAGGCCGAGCCTGCGGTCGAGGAGGAGACCAAACCCGAGGCCGAGCCAGCAGTGGAAGAGAAGCCTGCTGAAGAAGAAGAAGAAGCA
GCAGAGGAGAAACCAGCAGAAGACGAGCCTGCAGCTGAGAAAGCTGAGTAA
mRNA sequenceShow/hide mRNA sequence
GTCAAATCTCAAGATTTTGGTGAGAGGTAAATTGTCAAATCTCAAGATTTTTTTTTATTATTTAATATTTTGGTTGAAACCCCACATGAAACATTTGATTGAAGTTGTGA
GATCATCTTCAGAGTGCCACTCCTTCCTTTCCTCTGTCCTATAAAACCCACTCTTCTCCATCATTTTTCCATCCCACCATTTCTTTGTCTGCTTCAATTTCTTCATTCCT
CTCTACTAACATCTTTTACCATGGCTACTGCAGAGGTTGTAACACCAGAGATCGCTCTCCCAGAAGAAGCAACAGAGGTGGAGGTACCGCCGCCGAAGGTGGAAGAAGAG
GCTCAGCCCGAATCAGATACACCGGCAGAGGAGGCGGCACCGGCAACCGAAGAGACAGAAACTCCTGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAAGAAAC
AGAGCCAAAGGAAGAGGTTAAAGAAGAAGAAGAGACCAAACCAGAGGCCGAGCCTGCGGTCGAGGAGGAGACCAAACCCGAGGCCGAGCCAGCAGTGGAAGAGAAGCCTG
CTGAAGAAGAAGAAGAAGCAGCAGAGGAGAAACCAGCAGAAGACGAGCCTGCAGCTGAGAAAGCTGAGTAATTGTTTGCTCAAAGTTAATGTTTTTAATGTGGAGTTTGT
GTGGGTCAAGTTTAAGTGGTTGATCAAATGGGAGTGTAATAAGGCAAAACGAGTGTTAGGGATTAGGACACCTCGTCTTTGTTTCTATGGATGTTTGTTTGGAGTATCCA
ACAAATCATGTATGTTTGTATGAAAATATTGCATCCAATGTAAGGGTTTACAAGTCAATGTCTTTTTTATATTTTCTTCGTATAACTGTCTTTTTTTAATACAATATGAA
ATTCAAAGACTCCAACTATAAA
Protein sequenceShow/hide protein sequence
MATAEVVTPEIALPEEATEVEVPPPKVEEEAQPESDTPAEEAAPATEETETPVEVETKEVVVEEEETEPKEEVKEEEETKPEAEPAVEEETKPEAEPAVEEKPAEEEEEA
AEEKPAEDEPAAEKAE