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Sed0011127 (gene) of Chayote v1 genome

Gene IDSed0011127
OrganismSechium edule (Chayote v1)
DescriptionEF-hand calcium-binding domain-containing protein 4A
Genome locationLG12:5535555..5536330
RNA-Seq ExpressionSed0011127
SyntenySed0011127
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438723.1 PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo]4.4e-7694.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTR+WN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
XP_011650993.1 uncharacterized protein LOC105434839 [Cucumis sativus]2.8e-7594.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTRIWN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKK RPDFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
XP_022936946.1 uncharacterized protein LOC111443378 [Cucurbita moschata]8.3e-7595.77Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTRIWN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
XP_023522910.1 uncharacterized protein LOC111786960 [Cucurbita pepo subsp. pepo]1.1e-7495.07Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTRIWN SDRP+ELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
XP_038875149.1 uncharacterized protein LOC120067683 [Benincasa hispida]3.7e-7594.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTRIWN SDRPVELQIRVGSILK+VH+LKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ+ISLEDLREFSEIRIFRDHQRGCVSV KKPRPDFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
TrEMBL top hitse value%identityAlignment
A0A0A0L8V0 Uncharacterized protein1.4e-7594.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTRIWN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKK RPDFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
A0A1S3AWR3 uncharacterized protein LOC1034837462.1e-7694.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTR+WN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
A0A5A7U2C9 Uncharacterized protein2.1e-7694.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTR+WN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQ++SLEDLREFSEIRIFRDHQRGC+SVRKKPRPDFC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
A0A6J1F8W2 uncharacterized protein LOC1114433784.0e-7595.77Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDHAQ SGFGTRIWN SDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
A0A6J1I9A2 LOW QUALITY PROTEIN: uncharacterized protein LOC1114722554.4e-7494.37Show/hide
Query:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS
        MPGFGVFPLGSCFDGCRDH Q SGFGTRIWN SDRPVELQIRVG ILKKVHSLKPGCSKRLKCKSIYKAY PGRSM SLLYYYDEACQPYVWIHESGGDS
Subjt:  MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDS

Query:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
        MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR  FC
Subjt:  MRMVKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06145.1 unknown protein1.7e-3856.3Show/hide
Query:  LGSCFDGCRDH-----AQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDSMRM
        L  C+ GC D         +   TR WN SDRPVELQIRVGSILK+VH+LKPG SK+L+ +SI++AY   +     L YYD+ C PYVW+HE+G D  +M
Subjt:  LGSCFDGCRDH-----AQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDSMRM

Query:  VKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR
        VKQQ++SLEDLR++SEIR+F+D QRGCV+V K+ R
Subjt:  VKQQFISLEDLREFSEIRIFRDHQRGCVSVRKKPR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGGGTTCGGTGTTTTCCCTCTCGGTAGCTGTTTCGATGGCTGCCGAGACCACGCTCAGGGGTCTGGATTCGGCACGCGAATATGGAACTCGAGCGACAGGCCGGT
CGAGCTGCAGATAAGGGTGGGATCAATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGCATTTACAAAGCATACAAGCCAGGAA
GGAGTATGAATAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATGGTGAAGCAACAGTTCATCAGT
CTTGAAGATTTAAGGGAGTTTTCTGAGATCAGAATCTTTAGAGATCATCAGCGCGGTTGCGTGTCGGTTCGGAAGAAACCGAGGCCTGATTTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATCAGATTCAACTTTCCACAAAAAAAAGTGTTAAAAAACAGTAAAAAATAGTAGTTTCAGCTCATTTATATAGTTCAACCCCCAAGGGAGACTGATGGTTTTATGTGACA
AAAACAGAACCCACATTTCAAATGCCGGGGTTCGGTGTTTTCCCTCTCGGTAGCTGTTTCGATGGCTGCCGAGACCACGCTCAGGGGTCTGGATTCGGCACGCGAATATG
GAACTCGAGCGACAGGCCGGTCGAGCTGCAGATAAGGGTGGGATCAATATTGAAAAAAGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGTAAGAGCATTT
ACAAAGCATACAAGCCAGGAAGGAGTATGAATAGCTTGCTTTATTACTATGATGAAGCTTGCCAACCTTATGTTTGGATACATGAAAGTGGAGGTGATTCCATGAGAATG
GTGAAGCAACAGTTCATCAGTCTTGAAGATTTAAGGGAGTTTTCTGAGATCAGAATCTTTAGAGATCATCAGCGCGGTTGCGTGTCGGTTCGGAAGAAACCGAGGCCTGA
TTTTTGCTGATTCTTAAATACTAAACCATGTTGCGTGTCTAAACTTTTGTAGCTTTTATATGAATGTTGTTCTTGTTTTTTTTGAGTCTGTAATGCTGTTGCCAAACTGT
CTTTCCCCTGTTTCCTTGTTTTGGTTTGGAATTGAAGAAAATCAGATGGCATTATTGGTGGTGTGCTTTTAAACACCCAGAATTGTTTGTTTCTTTGATTTTGATTTCTA
GTCGAT
Protein sequenceShow/hide protein sequence
MPGFGVFPLGSCFDGCRDHAQGSGFGTRIWNSSDRPVELQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYKPGRSMNSLLYYYDEACQPYVWIHESGGDSMRMVKQQFIS
LEDLREFSEIRIFRDHQRGCVSVRKKPRPDFC