; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011179 (gene) of Chayote v1 genome

Gene IDSed0011179
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:14902725..14903735
RNA-Seq ExpressionSed0011179
SyntenySed0011179
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0001650 - fibrillar center (cellular component)
GO:0001164 - RNA polymerase I CORE element sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043170.1 uncharacterized protein E6C27_scaffold110G00340 [Cucumis melo var. makuwa]3.2e-1170.91Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N ASRELY+G+ PVEL+F+A  MDF SKE+KAY +LKRQ LK E GFDAYKEF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

XP_008459007.1 PREDICTED: uncharacterized protein LOC103498249 [Cucumis melo]3.2e-1170.91Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N ASRELY+G+ PVEL+F+A  MDF SKE+KAY +LKRQ LK E GFDAYKEF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

XP_022147194.1 uncharacterized protein LOC111016204 [Momordica charantia]2.4e-1169.09Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N+ASRELYDG+ PVELKF A P++F  KE+KAYGLLKRQ LK E  FD+Y EF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

XP_023515321.1 uncharacterized protein LOC111779389 [Cucurbita pepo subsp. pepo]1.0e-0967.31Show/hide
Query:  SRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        + EL+DG+ PVELKFDARPM+F   E+KAYGLLK+Q LK   GF AYKEF S
Subjt:  SRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

XP_031738950.1 uncharacterized protein LOC101205590 [Cucumis sativus]1.9e-1172.73Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N ASRELY+G+ PVEL+F+A  MDF SKE+KAY LLKRQ LK E GFDAYKEF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

TrEMBL top hitse value%identityAlignment
A0A0A0M158 Uncharacterized protein9.1e-1272.73Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N ASRELY+G+ PVEL+F+A  MDF SKE+KAY LLKRQ LK E GFDAYKEF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

A0A1S3C9R8 uncharacterized protein LOC1034982491.5e-1170.91Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N ASRELY+G+ PVEL+F+A  MDF SKE+KAY +LKRQ LK E GFDAYKEF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

A0A5A7TIM1 Uncharacterized protein1.5e-1170.91Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N ASRELY+G+ PVEL+F+A  MDF SKE+KAY +LKRQ LK E GFDAYKEF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

A0A6J1D0A6 uncharacterized protein LOC1110162041.2e-1169.09Show/hide
Query:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        N+ASRELYDG+ PVELKF A P++F  KE+KAYGLLKRQ LK E  FD+Y EF S
Subjt:  NKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

A0A6J1L0V7 uncharacterized protein LOC1114980922.5e-0965.38Show/hide
Query:  SRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS
        + EL+DG+ PVELKFD RPM+F   E+KAYGLLK+Q LK   GF AYKEF S
Subjt:  SRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATGTTCTGAGAAAGGAGTGTGCAAAGGTTGCTTCATTTTGAGACTACAATTTCTTGCATCAGGAAAACGCCGTCCCGATCAGCTTACGGTTTGGAACAAAGCTAG
TAGGGAACTATATGATGGTATTTTCCCCGTCGAGTTGAAATTCGATGCTCGCCCCATGGACTTTGAGTCAAAAGAGATGAAGGCATATGGTTTACTTAAAAGGCAACGGT
TGAAATTGGAAGCTGGGTTTGATGCATACAAGGAGTTTTCCTCCAACTCCAAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTATGTTCTGAGAAAGGAGTGTGCAAAGGTTGCTTCATTTTGAGACTACAATTTCTTGCATCAGGAAAACGCCGTCCCGATCAGCTTACGGTTTGGAACAAAGCTAG
TAGGGAACTATATGATGGTATTTTCCCCGTCGAGTTGAAATTCGATGCTCGCCCCATGGACTTTGAGTCAAAAGAGATGAAGGCATATGGTTTACTTAAAAGGCAACGGT
TGAAATTGGAAGCTGGGTTTGATGCATACAAGGAGTTTTCCTCCAACTCCAAGATTTGA
Protein sequenceShow/hide protein sequence
MLCSEKGVCKGCFILRLQFLASGKRRPDQLTVWNKASRELYDGIFPVELKFDARPMDFESKEMKAYGLLKRQRLKLEAGFDAYKEFSSNSKI