; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011193 (gene) of Chayote v1 genome

Gene IDSed0011193
OrganismSechium edule (Chayote v1)
DescriptionLOW QUALITY PROTEIN: ATP-dependent DNA helicase DDX11
Genome locationLG09:39302108..39303349
RNA-Seq ExpressionSed0011193
SyntenySed0011193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575535.1 ATP-dependent DNA helicase DDX11, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5663.26Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT
        MLLKETI        KTL NFK LFSKGFQKLQKPT LI FSCSK    PQHTH TD+ YID YD      S        +I        AK+N+K+EDT
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT

Query:  NVGK-------EEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA
        NV K       +E++   KK  G+  LRKGDVKN S RS+GLAQKMK+LEM +RGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSEFSV +PSA
Subjt:  NVGK-------EEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA

Query:  KRVNCSKRRIGSMRL
        + +N SKRR+GSMRL
Subjt:  KRVNCSKRRIGSMRL

XP_016902859.1 PREDICTED: uncharacterized protein LOC107991904 [Cucumis melo]4.2e-5661.93Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR
        MLLKETI        KTLE+FK LF KGFQKLQKPTSLI FSCSKG   PQHTH TD+ YID YD     +  A     DK   I        +KEN+K+
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR

Query:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ
        EDT V        K+E++   KK  G   LRKGDVKN STRS+GL +KMK+LEM +R DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMD+HSE SV +
Subjt:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ

Query:  PSAKRVNCSKRRIGSMRL
        PSA+ +N SKRR+GSMRL
Subjt:  PSAKRVNCSKRRIGSMRL

XP_022954247.1 uncharacterized protein LOC111456559 [Cucurbita moschata]5.5e-5663.26Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT
        MLLKETI        KTL NFK LFSKGFQKLQKPT LI FSCSK    PQHTH TD+ YID YD      S        +I        AK+N+K+EDT
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT

Query:  NVGK-------EEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA
        NV K       +E++   KK  G   LRKGDVKN S RS+GLAQKMK+LEM +RGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSEFSV +PSA
Subjt:  NVGK-------EEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA

Query:  KRVNCSKRRIGSMRL
        + +N SKRR+GSMRL
Subjt:  KRVNCSKRRIGSMRL

XP_031744975.1 uncharacterized protein LOC116405196 [Cucumis sativus]2.9e-5762.84Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR
        MLLK+TI        KTLENFK+LF KGFQKLQKPTSLI  SCSKG   PQHTH TD+ YID YD     +  A     DK   I        +KEN+K+
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR

Query:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ
        EDTNV        K+E++   KK  G   LRKGDVKN STRS+GL +KMK+LEM +R DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMD+HSE SV +
Subjt:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ

Query:  PSAKRVNCSKRRIGSMRL
        PSA+ VN SKRRIGSMRL
Subjt:  PSAKRVNCSKRRIGSMRL

XP_038900276.1 uncharacterized protein LOC120087356 [Benincasa hispida]7.6e-5862.79Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT
        MLLKETI        KTLENFK  F KGFQKLQKPTSLI FSCSKG P  QHTH TD+ YID YD     +  A     +          +KEN+K+EDT
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT

Query:  NVGKEEQSQLR-------KKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA
        NV K+   + R       KK  G   LRKGDVKN STRS+GL QKMK+LEM +RGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMD+HSE SV +PS 
Subjt:  NVGKEEQSQLR-------KKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA

Query:  KRVNCSKRRIGSMRL
        + VN SKRR+GSMRL
Subjt:  KRVNCSKRRIGSMRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAF5 Uncharacterized protein1.4e-5762.84Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR
        MLLK+TI        KTLENFK+LF KGFQKLQKPTSLI  SCSKG   PQHTH TD+ YID YD     +  A     DK   I        +KEN+K+
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR

Query:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ
        EDTNV        K+E++   KK  G   LRKGDVKN STRS+GL +KMK+LEM +R DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMD+HSE SV +
Subjt:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ

Query:  PSAKRVNCSKRRIGSMRL
        PSA+ VN SKRRIGSMRL
Subjt:  PSAKRVNCSKRRIGSMRL

A0A1S4E3Q5 uncharacterized protein LOC1079919042.0e-5661.93Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR
        MLLKETI        KTLE+FK LF KGFQKLQKPTSLI FSCSKG   PQHTH TD+ YID YD     +  A     DK   I        +KEN+K+
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR

Query:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ
        EDT V        K+E++   KK  G   LRKGDVKN STRS+GL +KMK+LEM +R DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMD+HSE SV +
Subjt:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ

Query:  PSAKRVNCSKRRIGSMRL
        PSA+ +N SKRR+GSMRL
Subjt:  PSAKRVNCSKRRIGSMRL

A0A5D3BXY4 Putative ATP-dependent RNA helicase DDX112.0e-5661.93Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR
        MLLKETI        KTLE+FK LF KGFQKLQKPTSLI FSCSKG   PQHTH TD+ YID YD     +  A     DK   I        +KEN+K+
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATS---DKTETIQTRLAWPVAKENIKR

Query:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ
        EDT V        K+E++   KK  G   LRKGDVKN STRS+GL +KMK+LEM +R DMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMD+HSE SV +
Subjt:  EDTNV-------GKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQ

Query:  PSAKRVNCSKRRIGSMRL
        PSA+ +N SKRR+GSMRL
Subjt:  PSAKRVNCSKRRIGSMRL

A0A6J1GQI6 uncharacterized protein LOC1114565592.6e-5663.26Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT
        MLLKETI        KTL NFK LFSKGFQKLQKPT LI FSCSK    PQHTH TD+ YID YD      S        +I        AK+N+K+EDT
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDT

Query:  NVGK-------EEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA
        NV K       +E++   KK  G   LRKGDVKN S RS+GLAQKMK+LEM +RGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSEFSV +PSA
Subjt:  NVGK-------EEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSA

Query:  KRVNCSKRRIGSMRL
        + +N SKRR+GSMRL
Subjt:  KRVNCSKRRIGSMRL

A0A6J1JPP9 uncharacterized protein LOC1114887164.5e-5662.5Show/hide
Query:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYD--SGNVMVSSATSDKTETIQTRLAWPVAKENIKRE
        MLLKETI        KTL NFK LFSKGFQKLQKPTSLI FSCSK    PQHTH T++ YID YD     +  S+  S    ++ T      AK+N+K+E
Subjt:  MLLKETI-------QKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYD--SGNVMVSSATSDKTETIQTRLAWPVAKENIKRE

Query:  DTNVGKE------EQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPS
        DTNV K+      ++  +++K  G+  LRKGDVKN S RS+GLAQKMK+LEM +RGDMEQELDIEEAIHYYSRL SPVYLEIVDKFFMDIHSEFSV +PS
Subjt:  DTNVGKE------EQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPS

Query:  AKRVNCSKRRIGSMRL
        A+ +N SKRR+GSMRL
Subjt:  AKRVNCSKRRIGSMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein6.9e-1734.01Show/hide
Query:  IQKTLENFKH-LFSKGFQKLQKPTSLI-PFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDTNVGKEEQSQLR
        ++KTL + K  + S  ++ L   T L+ P+SCS+  P    T                             QT+ ++ V   +    DT   K   +Q +
Subjt:  IQKTLENFKH-LFSKGFQKLQKPTSLI-PFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDTNVGKEEQSQLR

Query:  KKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSAKRVNCSKRRIGSMRL
        KKP           ++   R D LAQKMKDL M +  D++  LD+ EA+  YS +RSPVYL+IVD FF D++ EFS  + SAK +N S+R+ GS RL
Subjt:  KKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSAKRVNCSKRRIGSMRL

AT3G16070.1 unknown protein2.2e-1044.58Show/hide
Query:  VGKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHS
        V ++EQ    KK     S    D        D + +K+ ++ M E  D+EQ LD+EEA+HYYSR+ SPVYL IVDKFF D++S
Subjt:  VGKEEQSQLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHS

AT3G24535.1 unknown protein5.2e-0424.73Show/hide
Query:  KETIQKTLENFKHLFSKG--FQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDTNVGKEEQS
        ++  QKT++NFK  F     + KL K             PN   T++ + H      + N++ SS++S   +        P  K+ +    TN     Q 
Subjt:  KETIQKTLENFKHLFSKG--FQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDTNVGKEEQS

Query:  QLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQE----LDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEF
        ++  +     S  K ++         +  K+K++E     D+  +     D+ E +H YSRLR   YL++V+ FFM+++S+F
Subjt:  QLRKKPTGTGSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQE----LDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTAAAAGAAACCATCCAAAAAACTCTTGAAAACTTCAAGCATTTATTCTCCAAAGGCTTTCAAAAGCTGCAAAAACCAACTTCCCTGATCCCCTTTTCTTGCAG
CAAAGGAAATCCAAATCCACAACACACCCATCTGACAGACCAGCACTACATTGATGTTTACGACAGCGGCAACGTAATGGTCTCTTCGGCGACATCCGATAAAACTGAAA
CGATACAGACAAGATTAGCGTGGCCAGTGGCGAAGGAAAACATCAAACGAGAAGACACAAATGTTGGAAAAGAAGAACAAAGTCAGTTAAGGAAGAAACCAACAGGAACT
GGCAGTCTTAGAAAAGGTGATGTTAAAAACATGAGTACAAGAAGTGATGGATTAGCACAAAAAATGAAGGATTTGGAGATGTTTGAAAGGGGAGATATGGAACAAGAATT
GGATATTGAAGAAGCAATTCATTATTACTCTCGCTTAAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGATATTCACTCTGAATTCTCTGTTCTTCAGC
CTTCTGCTAAGAGGGTGAACTGCTCAAAGAGAAGAATTGGGTCCATGAGATTATAG
mRNA sequenceShow/hide mRNA sequence
CTAAAAGGAAGGAGAGGAAGTTAAGGGCAAGACTTGGAATTTCACACTAGCTTTGTCTTTAGGTAACTACATGAAACATAAACTGTCTCCATCTTTCTTCTCAGTCTTGA
AGAAATATTTAGTGAAAAAGCAAGAGAGAGATAAAGAGAAAGAGTTGCATTTCCTCTTCCAAACAGATTGAGAGAATTCCACAAAGCCCTTTTATTGTTATACCACATTA
CAACCAGATGCTGCTAAAAGAAACCATCCAAAAAACTCTTGAAAACTTCAAGCATTTATTCTCCAAAGGCTTTCAAAAGCTGCAAAAACCAACTTCCCTGATCCCCTTTT
CTTGCAGCAAAGGAAATCCAAATCCACAACACACCCATCTGACAGACCAGCACTACATTGATGTTTACGACAGCGGCAACGTAATGGTCTCTTCGGCGACATCCGATAAA
ACTGAAACGATACAGACAAGATTAGCGTGGCCAGTGGCGAAGGAAAACATCAAACGAGAAGACACAAATGTTGGAAAAGAAGAACAAAGTCAGTTAAGGAAGAAACCAAC
AGGAACTGGCAGTCTTAGAAAAGGTGATGTTAAAAACATGAGTACAAGAAGTGATGGATTAGCACAAAAAATGAAGGATTTGGAGATGTTTGAAAGGGGAGATATGGAAC
AAGAATTGGATATTGAAGAAGCAATTCATTATTACTCTCGCTTAAGAAGTCCTGTTTATCTTGAAATTGTGGACAAGTTTTTCATGGATATTCACTCTGAATTCTCTGTT
CTTCAGCCTTCTGCTAAGAGGGTGAACTGCTCAAAGAGAAGAATTGGGTCCATGAGATTATAGATTTTTCGGTTTTTTGATAATCGAGAATCAGAGTTTTGCTTCACTAC
CATGCACCTGCGTGCCCATTCCAAGGTCTGGACTTGAAAGACAACAAGAGATTTTACAGTTAAGCTTATTTGTGAATTTCAAACCTGAAACTGTAACCGAGCATACATTT
CAGACTCCAAGCCGCAATCAAGGAGGCTGCTATTGGGAGCATAGATTTTCATGTCAGTGATCTATTTCTTTTTGGGTAATTTGGTTTGATTGTGTTTTTATATTTTGATT
CCCCTATTGTTACTTCTCAGAATATATATATTTTGTGTGATTACTTGTTCATTGCCTGGTTTAGTTACAGCTATGTAAAAAATATTTAATAAAAACTTGAACTTTATTAC
TGCATTTGGGTCTGAGAATTAGACCTTTTATA
Protein sequenceShow/hide protein sequence
MLLKETIQKTLENFKHLFSKGFQKLQKPTSLIPFSCSKGNPNPQHTHLTDQHYIDVYDSGNVMVSSATSDKTETIQTRLAWPVAKENIKREDTNVGKEEQSQLRKKPTGT
GSLRKGDVKNMSTRSDGLAQKMKDLEMFERGDMEQELDIEEAIHYYSRLRSPVYLEIVDKFFMDIHSEFSVLQPSAKRVNCSKRRIGSMRL