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Sed0011216 (gene) of Chayote v1 genome

Gene IDSed0011216
OrganismSechium edule (Chayote v1)
Descriptionprotein transport protein Sec61 subunit gamma-like
Genome locationLG06:3887681..3887940
RNA-Seq ExpressionSed0011216
SyntenySed0011216
Gene Ontology termsGO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0071261 - Ssh1 translocon complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145664.1 protein transport protein Sec61 subunit gamma [Cucumis sativus]7.1e-1472.46Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
XP_007215225.2 uncharacterized protein LOC18784392 [Prunus persica]1.6e-1371.01Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREF+K +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
XP_008231108.1 PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume]1.6e-1371.01Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREF+K +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
XP_012489479.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii]1.6e-1371.01Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVA+RTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
XP_028063760.1 protein transport protein Sec61 subunit gamma [Camellia sinensis]1.2e-1371.01Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+A+DSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
TrEMBL top hitse value%identityAlignment
A0A0D2TL23 Uncharacterized protein3.5e-1472.46Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
A0A1U8ISF2 protein transport protein Sec61 subunit gamma3.5e-1472.46Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
A0A5D2CZA3 Uncharacterized protein3.5e-1472.46Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
A0A5D2VBP1 Uncharacterized protein3.5e-1472.46Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
A0A6J1J2N1 protein transport protein Sec61 subunit gamma-like3.5e-1472.46Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+AIDSVFDPLREFAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-12.0e-1467.65Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        M+AIDSV DPLR+FAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
P0DI75 Protein transport protein Sec61 subunit gamma-22.0e-1467.65Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        M+AIDSV DPLR+FAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
P38385 Protein transport protein Sec61 subunit gamma2.3e-1568.12Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
        M+A+DSV DPLREFAK +             +FTKVA RTAIGFVVMGFVG FV+LIFIPINNIIVGSG
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG
Q7Z1B8 Protein transport protein Sec61 subunit gamma7.9e-0848.53Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        M+ +    +P R+FAK +             +F K+AV TAIGF +MGF+G FV+LI IPINNIIVGS
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
Q9SMP2 Protein transport protein Sec61 subunit gamma-38.8e-1567.65Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        MEAIDS  DPLR+FAK +             +FTKVAVRTAIGFVVMGFVG FV+L+FIPINNIIVGS
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein6.2e-1667.65Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        MEAIDS  DPLR+FAK +             +FTKVAVRTAIGFVVMGFVG FV+L+FIPINNIIVGS
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
AT4G24920.1 secE/sec61-gamma protein transport protein1.4e-1567.65Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        M+AIDSV DPLR+FAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
AT5G50460.1 secE/sec61-gamma protein transport protein1.4e-1567.65Show/hide
Query:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS
        M+AIDSV DPLR+FAK +             +FTKVAVRTAIGFVVMGFVG FV+LIFIPINNIIVG+
Subjt:  MEAIDSVFDPLREFAKIA-------------KFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATTGATTCCGTCTTCGATCCTCTCCGAGAGTTCGCCAAGATCGCAAAGTTCACAAAGGTTGCGGTTCGTACTGCGATTGGGTTCGTGGTGATGGGATTCGT
TGGGGTTTTCGTTGAGCTCATTTTTATTCCCATTAATAACATCATCGTCGGATCTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATTGATTCCGTCTTCGATCCTCTCCGAGAGTTCGCCAAGATCGCAAAGTTCACAAAGGTTGCGGTTCGTACTGCGATTGGGTTCGTGGTGATGGGATTCGT
TGGGGTTTTCGTTGAGCTCATTTTTATTCCCATTAATAACATCATCGTCGGATCTGGTTAG
Protein sequenceShow/hide protein sequence
MEAIDSVFDPLREFAKIAKFTKVAVRTAIGFVVMGFVGVFVELIFIPINNIIVGSG