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Sed0011223 (gene) of Chayote v1 genome

Gene IDSed0011223
OrganismSechium edule (Chayote v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationLG08:3728744..3729670
RNA-Seq ExpressionSed0011223
SyntenySed0011223
Gene Ontology termsNA
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047452.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.8e-3139.68Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA
        +K+  G R ++V++SDRHKSI  AI+ ++P   HC+C+ HL  N+  K+K   D     ++  KA+ + NFE  MR LE+  P IREEL+ I + +WS A
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA

Query:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDK-ENFMQGRKNIGKYQI
        + P  +Y  +T N  ES N+ +L ARELPI SM +++RM+LQ WF  RR++     T+ T+  E  L+  + +  + M    N  KYQ+
Subjt:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDK-ENFMQGRKNIGKYQI

XP_006847242.1 protein FAR1-RELATED SEQUENCE 4, partial [Amborella trichopoda]2.1e-3144.97Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNM---IKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWS
        +++ +G R++  +ISDRH+SIS A  +++PE  HC C+YHL  N+    KK+ SK D   FF+ A+AYT   FE++M  L++    +R  LQQ+GY +WS
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNM---IKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWS

Query:  RAHCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQL
        R HC   RY TMT+N  ES N   L ARELPI ++ E +R L+Q W    R  A++ TT LT   EK+L
Subjt:  RAHCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQL

XP_008450197.1 PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo]1.0e-3047.92Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH
        +K+  G R ++V+ISDRHKSI  AI+ ++P+  HC+C+ HL  N+  K+K   D  +F S  KA+ + +F+  MR LE+  P IREEL+ IG+ +WSRA+
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH

Query:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWF
         PR RY  MT N  ES N+ +L AREL I SM E+++M+LQ WF
Subjt:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWF

XP_008465839.1 PREDICTED: uncharacterized protein LOC103503433 [Cucumis melo]8.0e-3140.11Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA
        +K+  G R ++V++SDRHKSI  AI+ ++P   HC+C+ HL  N+  K+K   D     ++  KA+ + NFE  MR LE+  P IREEL+ I + +WS A
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA

Query:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDKENFM
        + P  +Y  +T N  ES N+ +L ARELPI SM +++RM+LQ WF  RR++     T+ T+  E  L+  + +   M
Subjt:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDKENFM

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]5.0e-3344.71Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH
        +K+  G RQD+V++SDRHKSI  + ++++  A HC+C YHL  N+  K+K K  + +FF  AKAY V +FE  MR L++    IREEL  IG+ +WS A 
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH

Query:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASL
           +RY  MT N  ES N  +  ARELPI SM E++RM+LQ WF  R++ A+   T  T+  EK+L+  +
Subjt:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASL

TrEMBL top hitse value%identityAlignment
A0A1S3BN44 uncharacterized protein LOC1034918575.1e-3147.92Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH
        +K+  G R ++V+ISDRHKSI  AI+ ++P+  HC+C+ HL  N+  K+K   D  +F S  KA+ + +F+  MR LE+  P IREEL+ IG+ +WSRA+
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH

Query:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWF
         PR RY  MT N  ES N+ +L AREL I SM E+++M+LQ WF
Subjt:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWF

A0A1S3CPS6 uncharacterized protein LOC1035034333.9e-3140.11Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA
        +K+  G R ++V++SDRHKSI  AI+ ++P   HC+C+ HL  N+  K+K   D     ++  KA+ + NFE  MR LE+  P IREEL+ I + +WS A
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA

Query:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDKENFM
        + P  +Y  +T N  ES N+ +L ARELPI SM +++RM+LQ WF  RR++     T+ T+  E  L+  + +   M
Subjt:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDKENFM

A0A5A7TVG0 Protein FAR1-RELATED SEQUENCE 3-like1.3e-3139.68Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA
        +K+  G R ++V++SDRHKSI  AI+ ++P   HC+C+ HL  N+  K+K   D     ++  KA+ + NFE  MR LE+  P IREEL+ I + +WS A
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIF-FSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRA

Query:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDK-ENFMQGRKNIGKYQI
        + P  +Y  +T N  ES N+ +L ARELPI SM +++RM+LQ WF  RR++     T+ T+  E  L+  + +  + M    N  KYQ+
Subjt:  HCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDK-ENFMQGRKNIGKYQI

A0A6J1C328 uncharacterized protein LOC1110069942.4e-3344.71Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH
        +K+  G RQD+V++SDRHKSI  + ++++  A HC+C YHL  N+  K+K K  + +FF  AKAY V +FE  MR L++    IREEL  IG+ +WS A 
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAH

Query:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASL
           +RY  MT N  ES N  +  ARELPI SM E++RM+LQ WF  R++ A+   T  T+  EK+L+  +
Subjt:  CPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASL

U5D175 SWIM-type domain-containing protein (Fragment)1.0e-3144.97Show/hide
Query:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNM---IKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWS
        +++ +G R++  +ISDRH+SIS A  +++PE  HC C+YHL  N+    KK+ SK D   FF+ A+AYT   FE++M  L++    +R  LQQ+GY +WS
Subjt:  MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNM---IKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWS

Query:  RAHCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQL
        R HC   RY TMT+N  ES N   L ARELPI ++ E +R L+Q W    R  A++ TT LT   EK+L
Subjt:  RAHCPRTRYETMTNNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAATGGTTTGGTAATAGGCAAGATATTGTTGTCATATCTGATAGACACAAATCAATTAGCAATGCAATCGATGAGTTGTGGCCTGAAGCCTTCCACTGTTTGTG
CATTTACCATTTGAGTGACAACATGATAAAGAAGCACAAAAGCAAATGGGATAATGGTATATTCTTCAGTCTTGCTAAAGCATACACTGTGTATAACTTCGAGTTTTACA
TGCGTCACCTTGAAAATGAATGTCCTAGTATTCGTGAAGAGTTACAACAAATTGGTTATGAGAGGTGGTCACGCGCTCATTGTCCCCGTACTCGTTACGAAACTATGACC
AATAATTCATATGAAAGCTACAACAATCATATACTCTATGCACGTGAGCTTCCAATAGTTTCCATGTTCGAGCTTATTAGAATGTTGTTACAAGGGTGGTTTTGTGTGAG
AAGACATGATGCAGAAAGGTGTACAACGAACCTGACCGAGGAATGTGAAAAGCAATTGAAAGCATCACTAGATAAAGAGAATTTCATGCAGGGCCGAAAGAACATTGGGA
AGTACCAGATCACATTCGAGATAGGAAGCTTCTTCCTCCGAAAACTAAACGACATGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAATGGTTTGGTAATAGGCAAGATATTGTTGTCATATCTGATAGACACAAATCAATTAGCAATGCAATCGATGAGTTGTGGCCTGAAGCCTTCCACTGTTTGTG
CATTTACCATTTGAGTGACAACATGATAAAGAAGCACAAAAGCAAATGGGATAATGGTATATTCTTCAGTCTTGCTAAAGCATACACTGTGTATAACTTCGAGTTTTACA
TGCGTCACCTTGAAAATGAATGTCCTAGTATTCGTGAAGAGTTACAACAAATTGGTTATGAGAGGTGGTCACGCGCTCATTGTCCCCGTACTCGTTACGAAACTATGACC
AATAATTCATATGAAAGCTACAACAATCATATACTCTATGCACGTGAGCTTCCAATAGTTTCCATGTTCGAGCTTATTAGAATGTTGTTACAAGGGTGGTTTTGTGTGAG
AAGACATGATGCAGAAAGGTGTACAACGAACCTGACCGAGGAATGTGAAAAGCAATTGAAAGCATCACTAGATAAAGAGAATTTCATGCAGGGCCGAAAGAACATTGGGA
AGTACCAGATCACATTCGAGATAGGAAGCTTCTTCCTCCGAAAACTAAACGACATGTGGTAG
Protein sequenceShow/hide protein sequence
MKKWFGNRQDIVVISDRHKSISNAIDELWPEAFHCLCIYHLSDNMIKKHKSKWDNGIFFSLAKAYTVYNFEFYMRHLENECPSIREELQQIGYERWSRAHCPRTRYETMT
NNSYESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEECEKQLKASLDKENFMQGRKNIGKYQITFEIGSFFLRKLNDMW