; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011239 (gene) of Chayote v1 genome

Gene IDSed0011239
OrganismSechium edule (Chayote v1)
DescriptionRING-H2 finger protein
Genome locationLG04:14447240..14448104
RNA-Seq ExpressionSed0011239
SyntenySed0011239
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596287.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6571.79Show/hide
Query:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE
        MTR  +ALA NTS       APPP     ESDF VILAALLCALI +VGLIAVARC WLRRG  GG     ASANRGLKKK LQSLPKF YRAS   G E
Subjt:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE

Query:  ---GECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
            ECAICLAEF  GEEIR+LPQCGHCFHVSCVDTWL SHSSCPSCRQILV+ RCQ+CG+ PA VHGG     EEEQKRREDNN NN G+GFLP
Subjt:  ---GECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

KAG7027836.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6276.51Show/hide
Query:  ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE---GECAICLAEFTAGEEIRRLPQCGHCF
        ESDF VILAALLCALI +VGLIAVARC WLRRG  GG     ASANRGLKKK LQSLPKF YRAS   G E    ECAICLAEF  GEEIR+LPQCGHCF
Subjt:  ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE---GECAICLAEFTAGEEIRRLPQCGHCF

Query:  HVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        HVSCVDTWL SHSSCPSCRQILV+ RCQ+CG+ PA VHGG     EEEQKRREDNN NN G+GFLP
Subjt:  HVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

XP_022933605.1 RING-H2 finger protein ATL8 [Cucurbita moschata]5.1e-6671.79Show/hide
Query:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE
        MTR  +ALA NTS       APPP     ESDF VILAALLCALI +VGLIAVARC WLRRG  GG     ASANRGLKKK LQSLPKF YRAS   G E
Subjt:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE

Query:  ---GECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
            ECAICLAEF  GEEIR+LPQCGHCFHVSCVDTWL SHSSCPSCRQILV+ RCQ+CG+ PA VHGG    +EEEQKRREDNN NN G+GFLP
Subjt:  ---GECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

XP_022971423.1 RING-H2 finger protein ATL8 [Cucurbita maxima]2.5e-6571.94Show/hide
Query:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE
        MTR ++ALA NTS       APPP     ESDF VILAALLCALI +VGLIAVARC WLRRG  GG     ASANRGLKKK LQSLPKF YRAS   GGE
Subjt:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE

Query:  G----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        G    ECAICLAEF  GEEIR+LPQCGHCFHVSCVDTWL SHSSCPSCRQILV+ RCQ+CG  PA VHG      EEEQKRREDNN NN G+GFLP
Subjt:  G----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

XP_023539225.1 RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]1.3e-6672.96Show/hide
Query:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRR----GGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGE
        MTR  +ALA NTS       APPP     ESDF VILAALLCALI +VGLIAVARC WLRR    GG G  ASANRGLKKK LQSLPKFTYRAS   GGE
Subjt:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRR----GGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGE

Query:  G----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        G    ECAICLAEF  GEEIR+LPQCGHCFHVSCVDTWL SHSSCPSCRQILV+ RCQ+CG+ PA VHGG     EEEQKRREDNN NN G+GFLP
Subjt:  G----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

TrEMBL top hitse value%identityAlignment
A0A0A0L622 RING-type domain-containing protein3.8e-5969.57Show/hide
Query:  MTRDMRALAENT-SAPPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGG-EGECAICLAE
        M+  +RAL  NT SAPPP     ESDF VILAALLCALI +VGLIAVARC WLRR   G  ASANRGLKKK LQSLPKF Y+++   G    ECAICLAE
Subjt:  MTRDMRALAENT-SAPPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGG-EGECAICLAE

Query:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVH-GGAQEEEEEEQKRREDNNANNTGVGFLP
        F  GEEIR+LPQCGHCFHVSCVDTWLG+HSSCPSCRQILV+ RCQ+CGQ PA V  GGA   EEEE +   +NN NN G+GFLP
Subjt:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVH-GGAQEEEEEEQKRREDNNANNTGVGFLP

A0A1S3BKT0 RING-H2 finger protein ATL803.4e-6069.95Show/hide
Query:  MTRDMRALAENT-SAPPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGG-EGECAICLAE
        M+  +RAL  NT SAPPP     ESDF VILAALLCALI +VGLIAVARC WLRR   G  ASANRGLKKK LQSLPKF Y+++   G    ECAICLAE
Subjt:  MTRDMRALAENT-SAPPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGG-EGECAICLAE

Query:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        F  GEEIR+LPQCGHCFHVSCVDTWLG+HSSCPSCRQILV+ RCQ+CGQ PA V GGA +  EEE+   EDNN +N G+GFLP
Subjt:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

A0A5D3CJ22 RING-H2 finger protein ATL803.4e-6069.95Show/hide
Query:  MTRDMRALAENT-SAPPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGG-EGECAICLAE
        M+  +RAL  NT SAPPP     ESDF VILAALLCALI +VGLIAVARC WLRR   G  ASANRGLKKK LQSLPKF Y+++   G    ECAICLAE
Subjt:  MTRDMRALAENT-SAPPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGG-EGECAICLAE

Query:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        F  GEEIR+LPQCGHCFHVSCVDTWLG+HSSCPSCRQILV+ RCQ+CGQ PA V GGA +  EEE+   EDNN +N G+GFLP
Subjt:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

A0A6J1F5B4 RING-H2 finger protein ATL82.5e-6671.79Show/hide
Query:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE
        MTR  +ALA NTS       APPP     ESDF VILAALLCALI +VGLIAVARC WLRRG  GG     ASANRGLKKK LQSLPKF YRAS   G E
Subjt:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE

Query:  ---GECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
            ECAICLAEF  GEEIR+LPQCGHCFHVSCVDTWL SHSSCPSCRQILV+ RCQ+CG+ PA VHGG    +EEEQKRREDNN NN G+GFLP
Subjt:  ---GECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

A0A6J1I6T7 RING-H2 finger protein ATL81.2e-6571.94Show/hide
Query:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE
        MTR ++ALA NTS       APPP     ESDF VILAALLCALI +VGLIAVARC WLRRG  GG     ASANRGLKKK LQSLPKF YRAS   GGE
Subjt:  MTRDMRALAENTS-------APPP-----ESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGA----ASANRGLKKKTLQSLPKFTYRASPEPGGE

Query:  G----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        G    ECAICLAEF  GEEIR+LPQCGHCFHVSCVDTWL SHSSCPSCRQILV+ RCQ+CG  PA VHG      EEEQKRREDNN NN G+GFLP
Subjt:  G----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

SwissProt top hitse value%identityAlignment
O22755 Probable E3 ubiquitin-protein ligase ATL442.2e-4049.74Show/hide
Query:  MTRDMRALAENTSAPPP---------ESDFAVILAALLCALISIVGLIAVARCTWLRR-GGGGGAASANRGLKKKTLQSLPKFTYR-------ASPEPGG
        MTR  R L   T+APPP         ESD  VIL+ALLCALI + GL AV RC WLRR   GG + S N+GLKKK LQSLP+ T+        A+ E G 
Subjt:  MTRDMRALAENTSAPPP---------ESDFAVILAALLCALISIVGLIAVARCTWLRR-GGGGGAASANRGLKKKTLQSLPKFTYR-------ASPEPGG

Query:  EGECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
          ECAICL +F  GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC RCG      H    E +++  + +   +++ T   FLP
Subjt:  EGECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

Q8LC69 RING-H2 finger protein ATL82.8e-4356.63Show/hide
Query:  SAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG---------AASANRGLKKKTLQSLPKFTYRASPEPGGE-GECAICLAEFTAGEEIRR
        ++PP  SD  +ILA LLCAL  I+GLIAV+RC WLRR               A+AN+GLKKK L+SLPK TY     P  +  ECAICL EF AG+E+R 
Subjt:  SAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG---------AASANRGLKKKTLQSLPKFTYRASPEPGGE-GECAICLAEFTAGEEIRR

Query:  LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNAN
        LPQCGH FHVSC+DTWLGSHSSCPSCRQILV+ RC +CG LP +   G   E +   K+RED   N
Subjt:  LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNAN

Q9LM69 RING-H2 finger protein ATL801.0e-4554.64Show/hide
Query:  AENTSAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG--------------AASANRGLKKKTLQSLPKFTYR-ASPEPGGEGECAICLAE
        A + S     SD  VILAALLCALI ++GLIAV+RC WLRR   G                A+AN+GLKKK LQSLPK T+   SPE     ECAICLAE
Subjt:  AENTSAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG--------------AASANRGLKKKTLQSLPKFTYR-ASPEPGGEGECAICLAE

Query:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        F+AG+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILV+ RC +CG LP +   G + E E E + ++  +  N+   FLP
Subjt:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

Q9LZV8 RING-H2 finger protein ATL741.1e-2345.45Show/hide
Query:  ESDFAVILAALLCALISIVGLIAVARCTW-----LRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGEGECAICLAEFTAGEEIRRLPQCGHCFHV
        +++  +ILAALLCALI  +GL ++ RC       L      G  +   GLKK+ L+  P   Y +        ECAICL EF  GE +R LP C H FH+
Subjt:  ESDFAVILAALLCALISIVGLIAVARCTW-----LRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGEGECAICLAEFTAGEEIRRLPQCGHCFHV

Query:  SCVDTWLGSHSSCPSCRQILV
        SC+DTWL SHSSCP+CR  L+
Subjt:  SCVDTWLGSHSSCPSCRQILV

Q9ZT49 Probable E3 ubiquitin-protein ligase ATL455.2e-3746.38Show/hide
Query:  MTRDMRALAENTSAPPP-------ESDFAVILAALLCALISIVGLIAVARCTWLRRGGG------GGAASANRGLKKKTLQSLPKFTYRASPEPG-----
        MTR  R L   T++PPP       E+D  VIL+ALLCAL+ + GL AVARC WLRR  G      G A   N+GLKKK LQ+LPK TY AS         
Subjt:  MTRDMRALAENTSAPPP-------ESDFAVILAALLCALISIVGLIAVARCTWLRRGGG------GGAASANRGLKKKTLQSLPKFTYRASPEPG-----

Query:  ------GEG----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGV
              G+G    ECAIC+ EF+ GEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C RCG      H    E + ++Q     + +  T  
Subjt:  ------GEG----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGV

Query:  ---GFLP
            FLP
Subjt:  ---GFLP

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein7.4e-4754.64Show/hide
Query:  AENTSAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG--------------AASANRGLKKKTLQSLPKFTYR-ASPEPGGEGECAICLAE
        A + S     SD  VILAALLCALI ++GLIAV+RC WLRR   G                A+AN+GLKKK LQSLPK T+   SPE     ECAICLAE
Subjt:  AENTSAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG--------------AASANRGLKKKTLQSLPKFTYR-ASPEPGGEGECAICLAE

Query:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
        F+AG+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILV+ RC +CG LP +   G + E E E + ++  +  N+   FLP
Subjt:  FTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

AT1G76410.1 RING/U-box superfamily protein2.0e-4456.63Show/hide
Query:  SAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG---------AASANRGLKKKTLQSLPKFTYRASPEPGGE-GECAICLAEFTAGEEIRR
        ++PP  SD  +ILA LLCAL  I+GLIAV+RC WLRR               A+AN+GLKKK L+SLPK TY     P  +  ECAICL EF AG+E+R 
Subjt:  SAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGG---------AASANRGLKKKTLQSLPKFTYRASPEPGGE-GECAICLAEFTAGEEIRR

Query:  LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNAN
        LPQCGH FHVSC+DTWLGSHSSCPSCRQILV+ RC +CG LP +   G   E +   K+RED   N
Subjt:  LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNAN

AT2G17450.1 RING-H2 finger A3A1.6e-4149.74Show/hide
Query:  MTRDMRALAENTSAPPP---------ESDFAVILAALLCALISIVGLIAVARCTWLRR-GGGGGAASANRGLKKKTLQSLPKFTYR-------ASPEPGG
        MTR  R L   T+APPP         ESD  VIL+ALLCALI + GL AV RC WLRR   GG + S N+GLKKK LQSLP+ T+        A+ E G 
Subjt:  MTRDMRALAENTSAPPP---------ESDFAVILAALLCALISIVGLIAVARCTWLRR-GGGGGAASANRGLKKKTLQSLPKFTYR-------ASPEPGG

Query:  EGECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP
          ECAICL +F  GEEIR LP CGH FHV C+D WL S SSCPSCR+IL   RC RCG      H    E +++  + +   +++ T   FLP
Subjt:  EGECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP

AT4G35480.1 RING-H2 finger A3B3.7e-3846.38Show/hide
Query:  MTRDMRALAENTSAPPP-------ESDFAVILAALLCALISIVGLIAVARCTWLRRGGG------GGAASANRGLKKKTLQSLPKFTYRASPEPG-----
        MTR  R L   T++PPP       E+D  VIL+ALLCAL+ + GL AVARC WLRR  G      G A   N+GLKKK LQ+LPK TY AS         
Subjt:  MTRDMRALAENTSAPPP-------ESDFAVILAALLCALISIVGLIAVARCTWLRRGGG------GGAASANRGLKKKTLQSLPKFTYRASPEPG-----

Query:  ------GEG----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGV
              G+G    ECAIC+ EF+ GEEIR LP C H FHV+C+D WL S SSCPSCR+ILV  +C RCG      H    E + ++Q     + +  T  
Subjt:  ------GEG----ECAICLAEFTAGEEIRRLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGV

Query:  ---GFLP
            FLP
Subjt:  ---GFLP

AT5G01880.1 RING/U-box superfamily protein7.9e-2545.45Show/hide
Query:  ESDFAVILAALLCALISIVGLIAVARCTW-----LRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGEGECAICLAEFTAGEEIRRLPQCGHCFHV
        +++  +ILAALLCALI  +GL ++ RC       L      G  +   GLKK+ L+  P   Y +        ECAICL EF  GE +R LP C H FH+
Subjt:  ESDFAVILAALLCALISIVGLIAVARCTW-----LRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGEGECAICLAEFTAGEEIRRLPQCGHCFHV

Query:  SCVDTWLGSHSSCPSCRQILV
        SC+DTWL SHSSCP+CR  L+
Subjt:  SCVDTWLGSHSSCPSCRQILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCGATATGAGAGCTCTGGCCGAAAACACATCGGCGCCACCGCCTGAATCGGACTTCGCCGTGATTCTGGCGGCGCTGCTGTGTGCCCTAATTTCCATTGTGGG
GCTCATAGCGGTGGCTCGGTGCACGTGGCTCCGCCGTGGCGGCGGTGGGGGAGCGGCGTCGGCGAACAGGGGATTGAAAAAGAAAACCCTGCAATCGCTGCCCAAATTCA
CGTACAGAGCCTCGCCGGAGCCCGGCGGAGAGGGGGAATGCGCGATCTGCCTGGCGGAGTTCACGGCGGGGGAGGAGATCCGGCGGCTGCCGCAGTGCGGGCATTGCTTC
CACGTCAGCTGCGTGGACACGTGGCTGGGGTCCCACTCGTCCTGCCCTTCTTGCCGCCAGATCCTGGTTTTGGGCAGGTGCCAGAGGTGCGGGCAGTTGCCGGCGGCCGT
GCACGGCGGCGCTCAGGAGGAGGAGGAGGAGGAGCAGAAGAGGAGGGAAGATAACAATGCTAACAACACTGGTGTGGGATTTTTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAATAGCACCAAAAACAAATAATATGAATAGCAATCCCTTTTCTTAGTTTTCTCTTTCTCAATAATTTTGACTCCTTGCTTTGATTTCTCTTCTTCTTCTTCTTCTCTC
AAACAATTCCCTCTTTGTTTCATCTCCCAAATCTTTGTAACTGATGACTCGCGATATGAGAGCTCTGGCCGAAAACACATCGGCGCCACCGCCTGAATCGGACTTCGCCG
TGATTCTGGCGGCGCTGCTGTGTGCCCTAATTTCCATTGTGGGGCTCATAGCGGTGGCTCGGTGCACGTGGCTCCGCCGTGGCGGCGGTGGGGGAGCGGCGTCGGCGAAC
AGGGGATTGAAAAAGAAAACCCTGCAATCGCTGCCCAAATTCACGTACAGAGCCTCGCCGGAGCCCGGCGGAGAGGGGGAATGCGCGATCTGCCTGGCGGAGTTCACGGC
GGGGGAGGAGATCCGGCGGCTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTGGACACGTGGCTGGGGTCCCACTCGTCCTGCCCTTCTTGCCGCCAGATCCTGG
TTTTGGGCAGGTGCCAGAGGTGCGGGCAGTTGCCGGCGGCCGTGCACGGCGGCGCTCAGGAGGAGGAGGAGGAGGAGCAGAAGAGGAGGGAAGATAACAATGCTAACAAC
ACTGGTGTGGGATTTTTGCCTTGACTCTGCTCTGACTTTTAGTCAACGCTAGTTCATTCTGATTTTTCTTTGTTGTGAGAAAAACAAATGTTTAATAATGTAAATTGAAG
CTTTGGAATGGCGTTATTTGTGATACTGCCTTACTTCATCACACTTCAAAAAAGTATAATTATGTGTCAAAATCTTCTCATTTTTTCAAATTCTT
Protein sequenceShow/hide protein sequence
MTRDMRALAENTSAPPPESDFAVILAALLCALISIVGLIAVARCTWLRRGGGGGAASANRGLKKKTLQSLPKFTYRASPEPGGEGECAICLAEFTAGEEIRRLPQCGHCF
HVSCVDTWLGSHSSCPSCRQILVLGRCQRCGQLPAAVHGGAQEEEEEEQKRREDNNANNTGVGFLP