CuGenDBv2

Gene ID	Sed0011240
Organism	Sechium edule (Chayote v1)
Description	ZCF37
Genome location	LG13:23072924..23073403
RNA-Seq Expression	Sed0011240
Synteny	Sed0011240
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591424.1 hypothetical protein SDJN03_13770, partial [Cucurbita argyrosperma subsp. sororia]

6.1e-34

56.42

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Query:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--
        MAHD         KSRN  K H R+KKNPYSDRGLDKFSALL +L+QKR +IYSQ DPENIV++RFA+K+S ECVP+VVKQ++K +DK    T+SE +  
Subjt:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--

Query:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR
          QQN         D KS    R LR   KP   Y++A+VI  LILFLL VF R + +L  CVVWYL+PVLKQSS K R
Subjt:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR

XP_022936252.1 uncharacterized protein LOC111442926 [Cucurbita moschata]

2.3e-33

55.87

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Query:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--
        MAHD         KSR+  K H R+KKNPYSDRGLDKFSALL +L+QKR +IYSQ DPENIV++RFA+K+S ECVP+VVKQ++K +DK    T+SE +  
Subjt:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--

Query:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR
          QQN         D KS    R LR   KP   Y++A+VI  LILFLL VF R + +L  CVVWYL+PVLKQSS K R
Subjt:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR

XP_022975775.1 uncharacterized protein LOC111476372 [Cucurbita maxima]

3.0e-33

57.23

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Query:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI----QQN--------
        KSRN  K H R+KKNPYSDRGLDKFSALL +L++KR +IYSQ DPENIV+VRFA+K+S ECVP+VVKQ++K +DK    T+SE +    QQN        
Subjt:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI----QQN--------

Query:  -DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR
         D K+    R LR   KP   Y++A+VI  LILFLL VF R + +L  C+VWYL+PVLKQSS K R
Subjt:  -DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR

XP_023524394.1 uncharacterized protein LOC111788300 [Cucurbita pepo subsp. pepo]

4.6e-34

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Query:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQL-----VITESEPIQQNDTKSETN
        K+RN  KPH+++KKNPYSDRGLDKFSALL +L++KR +IY+Q DPENIVLVRFA+K+S ECVP+VVKQ++K ++K++      IT+ +P +++  +  T 
Subjt:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQL-----VITESEPIQQNDTKSETN

Query:  SRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQS
         R LRKP   YV+A+VIL+L+  LLCVF R +A++  CV WYLVPVLKQS
Subjt:  SRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQS

XP_023536130.1 uncharacterized protein LOC111797376 [Cucurbita pepo subsp. pepo]

1.4e-33

55.31

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Query:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--
        MAHD         KSRN  K H R+KKNPYSDRGLDKFSALL +L+QKR +IYSQ DPENIV++RFA+K+S ECVP+VVKQ++K +DK    T+SE +  
Subjt:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--

Query:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR
          QQN         D KS    R LR   KP   Y++A+VI  LILFLL VF R + ++  C+VWYL+PVLKQSS K R
Subjt:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BV47 uncharacterized protein LOC103493605

1.0e-31

52.76

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Query:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPIQQNDTKSET------
        KSRN  K H ++KKNPYSDRGLDKFSALL +L +KR +IYSQ DPE IV+VRFA+K+S ECVP+VVKQ++K ++K    +E+  I++     E+      
Subjt:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPIQQNDTKSET------

Query:  ------NSRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLRK
              N R L KP   Y++AVVILV  LFLL +F R + +L  C+ WYLVPVLKQS  K R+
Subjt:  ------NSRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLRK

A0A5D3D9A0 Putative ZCF37

1.0e-31

52.76

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Query:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPIQQNDTKSET------
        KSRN  K H ++KKNPYSDRGLDKFSALL +L +KR +IYSQ DPE IV+VRFA+K+S ECVP+VVKQ++K ++K    +E+  I++     E+      
Subjt:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPIQQNDTKSET------

Query:  ------NSRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLRK
              N R L KP   Y++AVVILV  LFLL +F R + +L  C+ WYLVPVLKQS  K R+
Subjt:  ------NSRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLRK

A0A6J1C965 uncharacterized protein LOC111009368

1.6e-32

56.79

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Query:  MAHD------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESE--PIQQ-
        MAH+       S NS    +RNKKNPYSDRGLDKFSALL NL++KR +IYSQ DPENIV+VRFA+K+S ECVP+VVKQ++K ++KQ  ++E++   IQ+ 
Subjt:  MAHD------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESE--PIQQ-

Query:  NDTKSETNSRGLRK---PKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSS
         D KS   SR LR+       Y++A+VI  LILFLL VF + + +L  CV+WYLVPVLKQSS
Subjt:  NDTKSETNSRGLRK---PKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSS

A0A6J1F7X7 uncharacterized protein LOC111442926

1.1e-33

55.87

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Query:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--
        MAHD         KSR+  K H R+KKNPYSDRGLDKFSALL +L+QKR +IYSQ DPENIV++RFA+K+S ECVP+VVKQ++K +DK    T+SE +  
Subjt:  MAHD---------KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI--

Query:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR
          QQN         D KS    R LR   KP   Y++A+VI  LILFLL VF R + +L  CVVWYL+PVLKQSS K R
Subjt:  --QQN---------DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR

A0A6J1IHN8 uncharacterized protein LOC111476372

1.5e-33

57.23

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Query:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI----QQN--------
        KSRN  K H R+KKNPYSDRGLDKFSALL +L++KR +IYSQ DPENIV+VRFA+K+S ECVP+VVKQ++K +DK    T+SE +    QQN        
Subjt:  KSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPI----QQN--------

Query:  -DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR
         D K+    R LR   KP   Y++A+VI  LILFLL VF R + +L  C+VWYL+PVLKQSS K R
Subjt:  -DTKSETNSRGLR---KPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10220.1 BEST Arabidopsis thaliana protein match is: ZCF37 (TAIR:AT1G59590.1)

2.2e-13

50.72

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Query:  RNKKNPYSDRGLDKFSALLANLQQKRNQIYSQN-DPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLV
        +  KNPYS++GLDKFSALL+ L +KR  IY++  DP+   LVRF   SSGECVP+++K +  +Q K ++
Subjt:  RNKKNPYSDRGLDKFSALLANLQQKRNQIYSQN-DPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLV

AT1G59590.1 ZCF37

7.2e-17

36.97

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Query:  NSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQN-DPENIVLVRFAHKSSGECVPLVV------KQRNKTQD---------------KQLVITE
        +S K   +  KNPYS+RGLDKFS LL+ L +KR  IYS+  D     LVRF   SSGECVP+V+      K+  KT+D               +++  TE
Subjt:  NSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQN-DPENIVLVRFAHKSSGECVPLVV------KQRNKTQD---------------KQLVITE

Query:  SEPIQQNDTKSETNSRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSS
         E  Q+       N + + +P   ++   VILVL+   L  F R +A+++ C+ WYLVP +++ S
Subjt:  SEPIQQNDTKSETNSRGLRKPKLSYVSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSS

Sequences

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CDS sequence

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ATGGCTCATGACAAATCCAGAAACAGCTTCAAACCCCACACCAGAAACAAGAAGAACCCGTACTCCGACCGCGGTCTCGACAAATTCTCAGCCCTTTTAGCCAACCTCCA
ACAAAAAAGAAACCAAATTTACTCTCAAAACGACCCAGAAAACATAGTTTTGGTCCGATTTGCTCACAAAAGCTCAGGCGAGTGCGTTCCTTTGGTTGTGAAACAGAGGA
ACAAGACACAAGACAAGCAATTGGTGATCACTGAATCGGAACCCATCCAACAGAACGACACCAAAAGCGAGACGAATTCGAGGGGATTGAGGAAACCCAAGTTGAGTTAT
GTTTCAGCTGTGGTGATTTTGGTTTTGATTCTGTTTTTGCTGTGTGTGTTTTCCAGATTTATGGCGGTTTTGTGGGTTTGTGTTGTTTGGTATTTGGTCCCTGTTTTGAA
ACAGAGTTCGTTGAAATTGAGGAAATGTGAAGAGGTTTGA

mRNA sequence

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Protein sequence

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MAHDKSRNSFKPHTRNKKNPYSDRGLDKFSALLANLQQKRNQIYSQNDPENIVLVRFAHKSSGECVPLVVKQRNKTQDKQLVITESEPIQQNDTKSETNSRGLRKPKLSY
VSAVVILVLILFLLCVFSRFMAVLWVCVVWYLVPVLKQSSLKLRKCEEV

Sed0011240 (gene) of Chayote v1 genome