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Sed0011273 (gene) of Chayote v1 genome

Gene IDSed0011273
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG02:49361164..49361944
RNA-Seq ExpressionSed0011273
SyntenySed0011273
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038944 - Outer envelope membrane protein 7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049387.1 hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa]1.4e-1067.24Show/hide
Query:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDIS
        M   AKLNA RSG+VVIGALAFGYL+LQ+  KPYLEKAQ+ LQ P+ +PST+ KD +S
Subjt:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDIS

KAG4960153.1 hypothetical protein JHK87_036786 [Glycine soja]7.2e-0763.04Show/hide
Query:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPST
        K+NA+RSG+VV+GALAFGYL++Q+  KPYLEKAQ    + +SDPS+
Subjt:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPST

KAG6582279.1 hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]6.1e-1475.81Show/hide
Query:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLED
        M  AAKLNAVRSGVVVIGALAFGYL+L LV KPYLEKAQ SLQ P+S+PST+ KD IS  +D
Subjt:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLED

KAG7018683.1 hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-1577.42Show/hide
Query:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLED
        M  AAKLNAVRSGVVVIGALAFGYL+L LV KPYLEKAQ+SLQ PDS+PST+ KD IS  +D
Subjt:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLED

KGN57013.1 hypothetical protein Csa_010432 [Cucumis sativus]2.3e-1372.13Show/hide
Query:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLE
        M   AKLNA RSG+VVIGALAFGYL+LQLV KPYLEKAQ+SLQ P+ +PST+ KD IS L+
Subjt:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLE

TrEMBL top hitse value%identityAlignment
A0A0A0L5N1 Uncharacterized protein1.1e-1372.13Show/hide
Query:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLE
        M   AKLNA RSG+VVIGALAFGYL+LQLV KPYLEKAQ+SLQ P+ +PST+ KD IS L+
Subjt:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLE

A0A0R0GRJ1 Uncharacterized protein3.5e-0763.04Show/hide
Query:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPST
        K+NA+RSG+VV+GALAFGYL++Q+  KPYLEKAQ    + +SDPS+
Subjt:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPST

A0A371EJR3 Uncharacterized protein (Fragment)3.5e-0766.67Show/hide
Query:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPS
        K+NA+RSG+VV+GALAFGYL+LQ+  KPYLEKAQ    +  SDPS
Subjt:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPS

A0A445I812 Uncharacterized protein3.5e-0763.04Show/hide
Query:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPST
        K+NA+RSG+VV+GALAFGYL++Q+  KPYLEKAQ    + +SDPS+
Subjt:  KLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPST

A0A5A7U4W2 Uncharacterized protein6.8e-1167.24Show/hide
Query:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDIS
        M   AKLNA RSG+VVIGALAFGYL+LQ+  KPYLEKAQ+ LQ P+ +PST+ KD +S
Subjt:  MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19151.1 unknown protein2.9e-0668.75Show/hide
Query:  NAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQ
        NA+RS VVV+G+LAFGYL+L+L  KP+LEKA+
Subjt:  NAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGAGCGGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTAGTGATCGGAGCTCTGGCCTTCGGGTACCTAAATCTACAGCTCGTACTCAAACCCTACCTCGAGAA
AGCTCAAACCTCTCTTCAAATTCCGGATTCGGATCCCTCCACAGTTCACAAAGACGACATTTCAAAGCTTGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
TTCGGTTTAGCCGTTTTTTTGTGTGTCTTTTCTTCATCCCTACTCGCAAGAAGAGTAGAATTATACGCGAGGGAACGATCTGAGTTTAGGGACGGCGGAAAGAGATCCGA
TGAACGGAGCGGCGAAGTTGAATGCGGTGAGGTCCGGCGTGGTAGTGATCGGAGCTCTGGCCTTCGGGTACCTAAATCTACAGCTCGTACTCAAACCCTACCTCGAGAAA
GCTCAAACCTCTCTTCAAATTCCGGATTCGGATCCCTCCACAGTTCACAAAGACGACATTTCAAAGCTTGAGGATTAAGCTCCATCTTCGTCCATTTTGCCTCGGTATGT
CTCAATTTAGCTTAGCGATAGATTAGGTTGGAATTTCTTAGGGTTCAAAGAGATATCGGAAGACGAAAGTTGGATCTAATGCTCTATTTGTTGAAGAATATAATAGATGC
GAATAAACGATTGACATTTTTTGCTCTCTTTGATTAATGGGGAATCCTTTCAGTTTTTGTGGTATTGGCTGGCTCGCTGCTTAAATCTGAATTCTGAAAATTGCTATTCT
CGGATTTTGCTCTTTCTTTTTGGTTGTTTGGTGTTGCTTAAGTTGTAAATGTCACTGATATGTCCCCGAACGAGTGGTGCGGTGCTTGAACGCCTGCGCTTTCAAGGTGT
GCTTCCCTCAAGTTTCGAGTGTCAAAAATTACTCGTGACATTAATTTGTAGACACTTCCAGTGTCTTCATTCTTTGATGTCTCTCGGTGTATGGCTTAAGAACGAGAGTG
CTTAGCCCGGG
Protein sequenceShow/hide protein sequence
MNGAAKLNAVRSGVVVIGALAFGYLNLQLVLKPYLEKAQTSLQIPDSDPSTVHKDDISKLED