CuGenDBv2

Gene ID	Sed0011318
Organism	Sechium edule (Chayote v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: protamine P1 family protein .
Genome location	LG03:13859033..13859801
RNA-Seq Expression	Sed0011318
Synteny	Sed0011318
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008449922.1 PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo]

5.6e-48

62.37

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR
        MKQ SK IS  SPSR+DL PPPL+SF+RADAG+RSK  RSRSSPIF+RKKN AIET+EPSSPKVTCMGQVRT+K  +  T A RCRWIRSVLS NRRHCR
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR

Query:  AFWNRSAALFRRKLEIER--KSSISDSEEDVEKNGVVDP-------VFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEK
         FWNRSA LFR K EI R  +S + +  ED EK+   D           SS+ +PPKNALILTRCRS P+RS    NR RSS   S+   + E+
Subjt:  AFWNRSAALFRRKLEIER--KSSISDSEEDVEKNGVVDP-------VFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEK

XP_022925671.1 uncharacterized protein LOC111433021 [Cucurbita moschata]

9.9e-53

67.02

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA
        MKQS KPIS  SPSR DL PPPL+SF+RADAG+RSK GRSRSSPIF+RKKN AIETQEPSSPKVTCMGQVRT+K  +   A RCRWIRSVLS NRR CR 
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA

Query:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSER
        FWNRS   F+   EI RKSSI+         DSE++ E  G   D VF SS  +PPKNALILTRCRSAPHRS  Y NR   S  RS+R
Subjt:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSER

XP_022977257.1 uncharacterized protein LOC111477626 [Cucurbita maxima]

1.8e-54

61.19

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA
        MKQS KPIS  SPSR DL PPPL+SF+RADAG+RSK GRSRSSPIF+RKKN  IETQEPSSPKVTCMGQVRT+K  +   A RCRWIRSVLS NRRHCR 
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA

Query:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE-------------
        FWNRS   F+ K EI RKSSI+         DSE++ E  G   D VF SS  +PPKNALILTRCRSAPHRS  YGN  RS R+  E             
Subjt:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE-------------

Query:  RGRIAEKLYRDL-NLAGEE
          R +E++++ L N  GEE
Subjt:  RGRIAEKLYRDL-NLAGEE

XP_023543942.1 uncharacterized protein LOC111803666 [Cucurbita pepo subsp. pepo]

2.8e-55

67.36

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA
        MKQS KPIS  SPSR DL PPPL+SF+RADAG+RSK GRSRSSPIF+RKKN AIETQEPSSPKVTCMGQVRT+K  +   A RCRWIRSVLS NRRHCR 
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA

Query:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAE
        FWNRS   F+ K EI RKSSI+         DSE++ E  G   D VF SS  +PPKNALILTRCRSAPHRS  YGNR   S  RS+R    E
Subjt:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAE

XP_038882779.1 uncharacterized protein LOC120073931 [Benincasa hispida]

4.2e-51

65.24

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKN-AAIETQEPSSPKVTCMGQVRTS--KTPAAATAARCRWIRSVLSSNRRH
        MK+ SK IS  SPSR+DL PPPL+SF+RADAG+RSK GRSRSSPIFV KKN  AIETQEPSSPKVTCMGQVR S  KTP    AARCRWIRSVLS NRR+
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKN-AAIETQEPSSPKVTCMGQVRTS--KTPAAATAARCRWIRSVLSSNRRH

Query:  CRAFWNRSAALFRRKLEIERKSSI---------SDSEEDVEKN-GVVDPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE-RGRIAEKLY
        CR FWN SA  FRRK EI RKSSI          DSE+D E + G  D VF SS+ +PPKNALILTRCRSAP+R+  YGNR RS    S+  G   EK  
Subjt:  CRAFWNRSAALFRRKLEIERKSSI---------SDSEEDVEKN-GVVDPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE-RGRIAEKLY

Query:  RDL-NLAGEE
         DL N A  E
Subjt:  RDL-NLAGEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KK43 Uncharacterized protein

5.1e-47

64.55

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR
        MKQ SK IS  SPSR+DL PPPL+SF+RADAG+RSK  RSRSSPIFV KKN AIETQEPSSPKVTCMGQVRT+K  +  T A RCRWIRSVLS NRRHCR
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR

Query:  AFWNRSAALFRRKLEIER----------KSSISDSEEDVEKNGVVDPVFES-SILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE
         FWNRSA L R K EI R          + S  D EED  ++G  D V+ S S+ +PPKNALIL+RCRSAP+RS   G R RSS   S+
Subjt:  AFWNRSAALFRRKLEIER----------KSSISDSEEDVEKNGVVDPVFES-SILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE

A0A1S3BN59 uncharacterized protein LOC103491651

2.7e-48

62.37

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR
        MKQ SK IS  SPSR+DL PPPL+SF+RADAG+RSK  RSRSSPIF+RKKN AIET+EPSSPKVTCMGQVRT+K  +  T A RCRWIRSVLS NRRHCR
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR

Query:  AFWNRSAALFRRKLEIER--KSSISDSEEDVEKNGVVDP-------VFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEK
         FWNRSA LFR K EI R  +S + +  ED EK+   D           SS+ +PPKNALILTRCRS P+RS    NR RSS   S+   + E+
Subjt:  AFWNRSAALFRRKLEIER--KSSISDSEEDVEKNGVVDP-------VFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEK

A0A5A7TVU1 Uncharacterized protein

2.7e-48

62.37

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR
        MKQ SK IS  SPSR+DL PPPL+SF+RADAG+RSK  RSRSSPIF+RKKN AIET+EPSSPKVTCMGQVRT+K  +  T A RCRWIRSVLS NRRHCR
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAAT-AARCRWIRSVLSSNRRHCR

Query:  AFWNRSAALFRRKLEIER--KSSISDSEEDVEKNGVVDP-------VFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEK
         FWNRSA LFR K EI R  +S + +  ED EK+   D           SS+ +PPKNALILTRCRS P+RS    NR RSS   S+   + E+
Subjt:  AFWNRSAALFRRKLEIER--KSSISDSEEDVEKNGVVDP-------VFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEK

A0A6J1ECV0 uncharacterized protein LOC111433021

4.8e-53

67.02

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA
        MKQS KPIS  SPSR DL PPPL+SF+RADAG+RSK GRSRSSPIF+RKKN AIETQEPSSPKVTCMGQVRT+K  +   A RCRWIRSVLS NRR CR 
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA

Query:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSER
        FWNRS   F+   EI RKSSI+         DSE++ E  G   D VF SS  +PPKNALILTRCRSAPHRS  Y NR   S  RS+R
Subjt:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSER

A0A6J1IHY6 uncharacterized protein LOC111477626

8.8e-55

61.19

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA
        MKQS KPIS  SPSR DL PPPL+SF+RADAG+RSK GRSRSSPIF+RKKN  IETQEPSSPKVTCMGQVRT+K  +   A RCRWIRSVLS NRRHCR 
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRA

Query:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE-------------
        FWNRS   F+ K EI RKSSI+         DSE++ E  G   D VF SS  +PPKNALILTRCRSAPHRS  YGN  RS R+  E             
Subjt:  FWNRSAALFRRKLEIERKSSIS---------DSEEDVEKNGVV-DPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSE-------------

Query:  RGRIAEKLYRDL-NLAGEE
          R +E++++ L N  GEE
Subjt:  RGRIAEKLYRDL-NLAGEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G37100.1 protamine P1 family protein

4.2e-17

38.32

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Query:  SSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKN--AAIETQEPSSPKVTCMGQVR--TSKTPAAATA-------------ARCRW
        SS+P+SSP  + +   PP L+ F+R  + SRS+  RSR  PIF R+KN  AA ETQEP+SPKVTCMGQVR   SK P   TA              RC W
Subjt:  SSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKN--AAIETQEPSSPKVTCMGQVR--TSKTPAAATA-------------ARCRW

Query:  IRSVLSSNRRHCRAF------------WNR----SAALFRRKLEIERKSSISDSEEDVEKNGVVDP-----------------VFESSILTPPKNALILT
        ++     N   C +F            W +    S A F +K E   K S S   E +     V+P                   +S   TPP+NA +LT
Subjt:  IRSVLSSNRRHCRAF------------WNR----SAALFRRKLEIERKSSISDSEEDVEKNGVVDP-----------------VFESSILTPPKNALILT

Query:  RCRSAPHRSMSYGN
        RCRSAP+RS S  N
Subjt:  RCRSAPHRSMSYGN

AT5G03110.1 FUNCTIONS IN: molecular_function unknown

5.9e-19

37.75

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Query:  MKQSSKPISSPSPSRSDLLPPPLVSFIR--ADAGSRSKI-----GRSRSSPIFVRK-KNAAIETQEPSSPKVTCMGQVRTSKTPAA--------ATAARC
        M  S +P+S  SP R +  PPP + F+R  ++ GS S+      GRSR+SP+FVR+ K+AA   QEPSSPKVTCMGQVR +++            T  RC
Subjt:  MKQSSKPISSPSPSRSDLLPPPLVSFIR--ADAGSRSKI-----GRSRSSPIFVRK-KNAAIETQEPSSPKVTCMGQVRTSKTPAA--------ATAARC

Query:  RWIRSVLSSN----RRHCRAFWNR------SAALF--------RRKLEIERKSSISDSEEDV--EKNGVVDPVFESSILTPPKNALILTRCRSAPHRSMS
         W+R+    N    +     FW +      S A          R +L+     S+ + +E++  E+N  +  +F S   TPP NAL+LTR RSAP+RS S
Subjt:  RWIRSVLSSN----RRHCRAFWNR------SAALF--------RRKLEIERKSSISDSEEDV--EKNGVVDPVFESSILTPPKNALILTRCRSAPHRSMS

Query:  YGNR
           R
Subjt:  YGNR

Sequences

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CDS sequence

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ATGAAGCAATCATCGAAGCCGATTTCGAGTCCGAGTCCGAGTCGGAGCGATTTGCTTCCGCCGCCGTTGGTGAGCTTCATCAGAGCCGATGCCGGAAGCCGGAGTAAAAT
CGGACGGTCTCGGTCCAGTCCGATCTTCGTCAGGAAGAAGAACGCCGCCATTGAAACGCAAGAGCCTTCCTCTCCCAAGGTCACTTGTATGGGACAAGTCCGCACCAGTA
AAACTCCCGCCGCCGCAACCGCCGCCCGATGCCGGTGGATTCGTAGCGTTCTGTCTTCCAATCGCCGCCATTGCCGAGCGTTCTGGAACAGATCGGCGGCGCTCTTCCGA
AGAAAACTTGAAATCGAACGGAAATCATCGATCTCTGATTCGGAGGAAGACGTAGAGAAGAACGGCGTCGTAGATCCGGTTTTTGAATCCTCGATTCTAACGCCGCCGAA
GAACGCTCTGATTCTAACGAGATGTAGATCTGCGCCGCACCGGTCGATGTCGTACGGAAATCGGAACCGGAGTTCGAGAAGTAGATCGGAGCGTGGAAGAATTGCGGAGA
AACTTTACAGAGATTTGAATCTTGCTGGAGAAGAAAGGTCGGTTTTGCTCATTGAACAAATTTCGATTAGATGA

mRNA sequence

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Protein sequence

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MKQSSKPISSPSPSRSDLLPPPLVSFIRADAGSRSKIGRSRSSPIFVRKKNAAIETQEPSSPKVTCMGQVRTSKTPAAATAARCRWIRSVLSSNRRHCRAFWNRSAALFR
RKLEIERKSSISDSEEDVEKNGVVDPVFESSILTPPKNALILTRCRSAPHRSMSYGNRNRSSRSRSERGRIAEKLYRDLNLAGEERSVLLIEQISIR

Sed0011318 (gene) of Chayote v1 genome