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Sed0011337 (gene) of Chayote v1 genome

Gene IDSed0011337
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:6297250..6297603
RNA-Seq ExpressionSed0011337
SyntenySed0011337
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050243.1 hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa]4.6e-2382.89Show/hide
Query:  GSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSIILGKAH
        GSAVGTV+FHGL SSA+DAFVISI FAFSGALSALLVPQR  LA FCA+YS+VSMA+ALLLLIWGLY+++ILGKAH
Subjt:  GSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSIILGKAH

KAG6579131.1 hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia]8.1e-3681.03Show/hide
Query:  MKISDQNFAVTKLSTFTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAAL
        M++SDQ FAVTKLSTFT  T+IL+SILFLS NSLTILVLFAGSA G VIFH LPSS +DAFVISI FAFSGALSALLVPQR  LATFCALYS+ SMA+AL
Subjt:  MKISDQNFAVTKLSTFTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAAL

Query:  LLLIWGLYYSIILGKA
        LLLIWGLY+S +LGKA
Subjt:  LLLIWGLYYSIILGKA

KAG6601931.1 hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1858.33Show/hide
Query:  MKISDQNFAVTKLSTFTLQTIILKSILFLSLNSLTILVLFAGSAVG---TVIFHGL--PSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVS
        M  SDQN  V  L      TI+LK IL+LSLN+L+IL++ +G + G    +IF GL  PSSA DAFV+SI FAF GAL ALL+P +  LATF  LYSV S
Subjt:  MKISDQNFAVTKLSTFTLQTIILKSILFLSLNSLTILVLFAGSAVG---TVIFHGL--PSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVS

Query:  MAAALLLLIWGLYYSIILGK
        MA+ALLLLIWGLYYS + G+
Subjt:  MAAALLLLIWGLYYSIILGK

KGN49807.1 hypothetical protein Csa_004664 [Cucumis sativus]5.0e-0953.61Show/hide
Query:  TIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSI
        T +L SILF+S N+LTIL+  +  +      VIF+ L  PS A DAFV+SI F+FS AL ALL+P +  LA + A YSV  MA AL LLI GLYY I
Subjt:  TIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSI

KGN49809.1 hypothetical protein Csa_004648 [Cucumis sativus]3.1e-3580.34Show/hide
Query:  MKISDQNFAVTKLST-FTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAA
        MK+S+Q  A+ KL T FTL TIILKSILFLSLNSLTIL+LFAGSAVGTVIFHG PSSA+DAF+ISI FAFSGALSALLVPQR KLA FCALYS+ S+A+A
Subjt:  MKISDQNFAVTKLST-FTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAA

Query:  LLLLIWGLYYSIILGKA
        LLLLIWGLY+++ILGKA
Subjt:  LLLLIWGLYYSIILGKA

TrEMBL top hitse value%identityAlignment
A0A061E956 Uncharacterized protein2.0e-0846Show/hide
Query:  LSTFTLQTIILKSILFLSLNSLTILVLF-----AGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGL
        LS+  +QT IL+SILF+S    TIL+L       GS V  ++F G P++   AF I I FAFSGA  AL+ P   ++A+ C  YS+ SMA+A+ LLIW +
Subjt:  LSTFTLQTIILKSILFLSLNSLTILVLF-----AGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGL

A0A0A0KLQ9 Uncharacterized protein1.5e-3580.34Show/hide
Query:  MKISDQNFAVTKLST-FTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAA
        MK+S+Q  A+ KL T FTL TIILKSILFLSLNSLTIL+LFAGSAVGTVIFHG PSSA+DAF+ISI FAFSGALSALLVPQR KLA FCALYS+ S+A+A
Subjt:  MKISDQNFAVTKLST-FTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAA

Query:  LLLLIWGLYYSIILGKA
        LLLLIWGLY+++ILGKA
Subjt:  LLLLIWGLYYSIILGKA

A0A0A0KN11 Uncharacterized protein2.4e-0953.61Show/hide
Query:  TIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSI
        T +L SILF+S N+LTIL+  +  +      VIF+ L  PS A DAFV+SI F+FS AL ALL+P +  LA + A YSV  MA AL LLI GLYY I
Subjt:  TIILKSILFLSLNSLTILVLFAGSAV---GTVIFHGL--PSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSI

A0A5A7U2V8 Uncharacterized protein2.2e-2382.89Show/hide
Query:  GSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSIILGKAH
        GSAVGTV+FHGL SSA+DAFVISI FAFSGALSALLVPQR  LA FCA+YS+VSMA+ALLLLIWGLY+++ILGKAH
Subjt:  GSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYSIILGKAH

A0A5B7B2W8 Uncharacterized protein (Fragment)2.3e-0750.54Show/hide
Query:  QTIILKSILFLSLNSLTILVLFA-----GSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSAL-LVPQRKKLATFCALYSVVSMAAALLLLIW
        Q IIL+SILF S  +  IL+        G+ V T+IF GLP SA  AF+I I FAFSGA   L ++P + +LATFC   S+ SMA+A+ LLIW
Subjt:  QTIILKSILFLSLNSLTILVLFA-----GSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSAL-LVPQRKKLATFCALYSVVSMAAALLLLIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATATCAGACCAAAACTTTGCAGTGACCAAACTCTCAACTTTCACTCTTCAAACAATAATCTTAAAATCAATTCTGTTTCTATCTTTGAACAGTCTCACAATCCT
TGTGTTATTTGCTGGCAGTGCAGTGGGGACTGTGATCTTTCATGGCCTTCCCTCCTCTGCCATGGATGCCTTTGTTATCTCTATTGCCTTTGCCTTTTCAGGTGCTTTGA
GTGCTCTTTTGGTCCCTCAAAGGAAAAAATTAGCTACCTTTTGTGCCTTGTATTCTGTGGTTTCCATGGCTGCTGCTCTGCTTCTGCTGATTTGGGGGCTGTATTACTCA
ATCATCCTTGGCAAAGCCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATATCAGACCAAAACTTTGCAGTGACCAAACTCTCAACTTTCACTCTTCAAACAATAATCTTAAAATCAATTCTGTTTCTATCTTTGAACAGTCTCACAATCCT
TGTGTTATTTGCTGGCAGTGCAGTGGGGACTGTGATCTTTCATGGCCTTCCCTCCTCTGCCATGGATGCCTTTGTTATCTCTATTGCCTTTGCCTTTTCAGGTGCTTTGA
GTGCTCTTTTGGTCCCTCAAAGGAAAAAATTAGCTACCTTTTGTGCCTTGTATTCTGTGGTTTCCATGGCTGCTGCTCTGCTTCTGCTGATTTGGGGGCTGTATTACTCA
ATCATCCTTGGCAAAGCCCACTAG
Protein sequenceShow/hide protein sequence
MKISDQNFAVTKLSTFTLQTIILKSILFLSLNSLTILVLFAGSAVGTVIFHGLPSSAMDAFVISIAFAFSGALSALLVPQRKKLATFCALYSVVSMAAALLLLIWGLYYS
IILGKAH