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Sed0011377 (gene) of Chayote v1 genome

Gene IDSed0011377
OrganismSechium edule (Chayote v1)
DescriptionNAC domain-containing protein
Genome locationLG02:44228146..44228883
RNA-Seq ExpressionSed0011377
SyntenySed0011377
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580573.1 NAC domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2239.78Show/hide
Query:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS
        +G  FAPTDEEL   YL+ KI  D   S +LPV                                       V  NG TWSGE+K  +VFS A  A I +
Subjt:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS

Query:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT
        +KRFHYE +  +  + +DCSW M+EYTLDP  +  G  HDSYV+C IRKRI+K VR  V + +Q     P   + P  TQT
Subjt:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT

KAG7017325.1 NAC domain-containing protein 96, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-2239.78Show/hide
Query:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS
        +G  FAPTDEEL   YL+ KI  D   S +LPV                                       V  NG TWSGE+K  +VFS A  A I +
Subjt:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS

Query:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT
        +KRFHYE +  +  + +DCSW M+EYTLDP  +  G  HDSYV+C IRKRI+K VR  V + +Q     P   + P  TQT
Subjt:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT

XP_008443570.1 PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]1.3e-2339.7Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIG-AFISS
        G  F PTDEEL   YL+ K+  +      LPV                                       V SNG TWS EN+A +VFS  I    + S
Subjt:  GIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIG-AFISS

Query:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQNH
        VKRFHY+ PK K    I DC+W MYEYTLDP+ VPKG  HDSYVLC IRK+IVK+ +K V T               +  + ++S+ PTTSM V +Q H
Subjt:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQNH

XP_022934631.1 NAC domain-containing protein 12-like [Cucurbita moschata]1.2e-2139.78Show/hide
Query:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS
        +G  FAPTDEEL   YL+ KI  D   S +LPV                                       V  NG TWSGE+K  +VFS A  A I +
Subjt:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS

Query:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT
        +KRFHYE +  +  + +DCSW M+EYTLDP  +  G  HDSYV+C IRKRI+K VR  V + +Q     P   + P  TQT
Subjt:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT

XP_038880323.1 NAC domain-containing protein 96-like [Benincasa hispida]6.4e-2836.25Show/hide
Query:  GIVFAPTDEELFELYLYPKIAED-----------------------CNG----------------SFTLPVVASNGATWSGENKATRVFSEAIGAFISSV
        G  F+PTDEEL   YL+ KI  D                       C G                S  +  V SNGATWSGENKA  VFS    A I SV
Subjt:  GIVFAPTDEELFELYLYPKIAED-----------------------CNG----------------SFTLPVVASNGATWSGENKATRVFSEAIGAFISSV

Query:  KRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQ------
        KRFHYEN K+K + ++ SW MYEYTL P FVPKG  HDS+VLCK+R +I+K  ++ + T +Q   S+ P   +P  T+      P       E+      
Subjt:  KRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQ------

Query:  NHPIPAEMENYDPNM-----TFTEDEIRQLLVHMDLK-PVVQENHVPPSNL
         + +  +  N++         FTED+I+QL+   +L+ P +QE+ + P N+
Subjt:  NHPIPAEMENYDPNM-----TFTEDEIRQLLVHMDLK-PVVQENHVPPSNL

TrEMBL top hitse value%identityAlignment
A0A1S3B8F1 NAC domain-containing protein 105-like6.1e-2439.7Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIG-AFISS
        G  F PTDEEL   YL+ K+  +      LPV                                       V SNG TWS EN+A +VFS  I    + S
Subjt:  GIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIG-AFISS

Query:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQNH
        VKRFHY+ PK K    I DC+W MYEYTLDP+ VPKG  HDSYVLC IRK+IVK+ +K V T               +  + ++S+ PTTSM V +Q H
Subjt:  VKRFHYENPKLKG--SIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQNH

A0A5A7UPM7 NAC domain-containing protein 105-like protein3.1e-2041.29Show/hide
Query:  GIVFAPTDEELFELYLY-----------------------PKIAEDCNG----------------SFTLPVVASNGATWSGENKATRVFSEAIGAFISSV
        G  F PTDEEL   YLY                       P+I E C G                S  +  V SNGA WSGE+KAT+VFS      + + 
Subjt:  GIVFAPTDEELFELYLY-----------------------PKIAEDCNG----------------SFTLPVVASNGATWSGENKATRVFSEAIGAFISSV

Query:  KRFHYENPKLKGSIEDC----SWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK
        KRFHYEN K+   ++DC    SW MYEYTL P  VP+G  HDS+VLC +RK+I+K
Subjt:  KRFHYENPKLKGSIEDC----SWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK

A0A5D3BHG6 NAC domain-containing protein 105-like protein3.1e-2041.29Show/hide
Query:  GIVFAPTDEELFELYLY-----------------------PKIAEDCNG----------------SFTLPVVASNGATWSGENKATRVFSEAIGAFISSV
        G  F PTDEEL   YLY                       P+I E C G                S  +  V SNGA WSGE+KAT+VFS      + + 
Subjt:  GIVFAPTDEELFELYLY-----------------------PKIAEDCNG----------------SFTLPVVASNGATWSGENKATRVFSEAIGAFISSV

Query:  KRFHYENPKLKGSIEDC----SWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK
        KRFHYEN K+   ++DC    SW MYEYTL P  VP+G  HDS+VLC +RK+I+K
Subjt:  KRFHYENPKLKGSIEDC----SWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVK

A0A6J1F2C3 NAC domain-containing protein 12-like5.7e-2239.78Show/hide
Query:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS
        +G  FAPTDEEL   YL+ KI  D   S +LPV                                       V  NG TWSGE+K  +VFS A  A I +
Subjt:  YGIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVFSEAIGAFISS

Query:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT
        +KRFHYE +  +  + +DCSW M+EYTLDP  +  G  HDSYV+C IRKRI+K VR  V + +Q     P   + P  TQT
Subjt:  VKRFHYE-NPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQT

A0A6J1F881 NAC domain-containing protein 96-like2.6e-1937.75Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVF-SEAIGAFISS
        G VF PTD+ELF+ YL+ KI  + +  + LPV                                       V SNG TWSGE+ A ++F S+     + +
Subjt:  GIVFAPTDEELFELYLYPKIAEDCNGSFTLPV---------------------------------------VASNGATWSGENKATRVF-SEAIGAFISS

Query:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIV
        +KRFHYEN K++ S E+CSW M+EYT++P  VP G  HD +V CKIR +I+
Subjt:  VKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCKIRKRIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTGCAATGGTTCATTTACTCTACCCGT
GGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATCAGTAGTGTCAAACGCTTTCATTACGAGAATC
CTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCAAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAG
ATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGC
TTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAGGATGAAATTAGAC
AACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCATGTACCACCATCCAATTTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTGCAATGGTTCATTTACTCTACCCGT
GGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATCAGTAGTGTCAAACGCTTTCATTACGAGAATC
CTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCCGCCTTTGTACCAAAAGGGAAAGCACATGATTCGTATGTACTTTGCAAG
ATTCGAAAAAGAATTGTGAAAACAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGC
TTCTTCTCGGCCTACGACATCGATGGAAGTATACGAACAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAGGATGAAATTAGAC
AACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCATGTACCACCATCCAATTTGAAGTAA
Protein sequenceShow/hide protein sequence
MYRQYGIVFAPTDEELFELYLYPKIAEDCNGSFTLPVVASNGATWSGENKATRVFSEAIGAFISSVKRFHYENPKLKGSIEDCSWTMYEYTLDPAFVPKGKAHDSYVLCK
IRKRIVKTVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSMEVYEQNHPIPAEMENYDPNMTFTEDEIRQLLVHMDLKPVVQENHVPPSNLK