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Sed0011383 (gene) of Chayote v1 genome

Gene IDSed0011383
OrganismSechium edule (Chayote v1)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationLG13:3503141..3507057
RNA-Seq ExpressionSed0011383
SyntenySed0011383
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3579.21Show/hide
Query:  MDPAREDANDPKSRSFIRAS-APRFSSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKI
        MDPARE  N  K + F+  S AP  S     + ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSCVDKCVAPKLFTKI
Subjt:  MDPAREDANDPKSRSFIRAS-APRFSSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKI

Query:  K
        K
Subjt:  K

KAG7030998.1 hypothetical protein SDJN02_05037 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3398.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSCVDKCVAPKLFTKIK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]1.9e-3389.47Show/hide
Query:  SSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        S     + ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSCVDKCVAPKLFTKIK
Subjt:  SSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

XP_022983580.1 cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]2.5e-3398.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSCVDKCVAPKLFTKIK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

XP_023522930.1 cytochrome b-c1 complex subunit 6-like [Cucurbita pepo subsp. pepo]1.4e-3398.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ADEEPVDQKRYLE+ACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

TrEMBL top hitse value%identityAlignment
A0A0R0FX70 Cytochrome b-c1 complex subunit 64.5e-3387.84Show/hide
Query:  FC--SKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        FC  S+ADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRI GDDSG KHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  FC--SKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

A0A1S3C350 Cytochrome b-c1 complex subunit 62.7e-3395.59Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like9.2e-3489.47Show/hide
Query:  SSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        S     + ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSCVDKCVAPKLFTKIK
Subjt:  SSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

A0A6J1J694 Cytochrome b-c1 complex subunit 61.2e-3398.53Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYWSCVDKCVAPKLFTKIK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 67.8e-3394.12Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SG+KHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 61.3e-2469.12Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        +DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SG+KHCTGQYFDYW C+DKCVA KLF  +K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial4.8e-3285.29Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYW C+DKCVAPKLF K+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 64.1e-0740Show/hide
Query:  LEEACKPKCVKPLLEYQAC---VKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        ++E C   C K    YQAC   V +++ D+  N  C GQ+ ++  C+DKCV PKLF ++K
Subjt:  LEEACKPKCVKPLLEYQAC---VKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial6.8e-2683.05Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SG+KHCTGQYFDYW CVDKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein3.4e-3385.29Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK
        AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYW C+DKCVAPKLF K+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein8.8e-2972.15Show/hide
Query:  KSRSFIRASAPRFSSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKC
        +SRS +  S   FS  L  + AD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSG+KHCTGQYFDYW C+DKC
Subjt:  KSRSFIRASAPRFSSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein4.8e-2783.05Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SG+KHCTGQYFDYW CVDKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein4.8e-2783.05Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SG+KHCTGQYFDYW CVDKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGGCCCGAGAAGATGCTAATGATCCGAAAAGCAGAAGCTTTATTCGTGCTTCAGCTCCAAGGTTTTCTAGCCTTCTCTTTTGCTCCAAGGCGGATGAAGAACC
CGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTGCTTGAATATCAGGCGTGCGTGAAGAGAATTCAAGGCGATGACAGTGGAAATA
AGCATTGCACTGGACAGTATTTCGATTACTGGTCTTGCGTCGACAAATGCGTTGCACCAAAACTATTTACGAAAATAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGGCCCGAGAAGATGCTAATGATCCGAAAAGCAGAAGCTTTATTCGTGCTTCAGCTCCAAGGTTTTCTAGCCTTCTCTTTTGCTCCAAGGCGGATGAAGAACC
CGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTGCTTGAATATCAGGCGTGCGTGAAGAGAATTCAAGGCGATGACAGTGGAAATA
AGCATTGCACTGGACAGTATTTCGATTACTGGTCTTGCGTCGACAAATGCGTTGCACCAAAACTATTTACGAAAATAAAGTAA
Protein sequenceShow/hide protein sequence
MDPAREDANDPKSRSFIRASAPRFSSLLFCSKADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGNKHCTGQYFDYWSCVDKCVAPKLFTKIK