CuGenDBv2

Gene ID	Sed0011406
Organism	Sechium edule (Chayote v1)
Description	glycine-rich protein
Genome location	LG04:32394745..32395822
RNA-Seq Expression	Sed0011406
Synteny	Sed0011406
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593986.1 hypothetical protein SDJN03_13462, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-76

82.18

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MDTS++AGTLS+ ANNG+GFAKFLNR DFVSN +ISATDSI DQI P SAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS
        GGE   NGF  GGGDFDGSYGGGGG  GG GWNFDRFGGSDW+ES+SSSS NPAYYFVYEVV WIALSNCVHFAFKK++RFA  AI NS RGKLSMRLIS
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS

Query:  VC
        VC
Subjt:  VC

KAG7026327.1 hypothetical protein SDJN02_12828, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-76

82.18

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MDTS++AGTLS+ ANNG+GFAKFLNR DFVSN +ISATDSI DQI P SAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS
        GGE   NGF  GGGDFDGSYGGGGG  GG GWNFDRFGGSDW+ES+SSSS NPAYYFVYEVV WIALSNCVHFAFKK++RFA  AI NS RGKLSMRLIS
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS

Query:  VC
        VC
Subjt:  VC

XP_022138602.1 uncharacterized protein LOC111009719 [Momordica charantia]

2.3e-78

83.25

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MD+S++AGTLS+AANNGLGFAKFLNRLDFVSN  +SA+DSIT+QIPPSSAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSS-YNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLI
        GG  ED+GF  GG +FDGSYGGGGG   G GWNFDRFGG+DWDES+SSSS  NPAYYFVYEVVCWIALSNCVHFAFKK+VRFAA+AIGNS RGKLSMRLI
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSS-YNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLI

Query:  SVC
        SVC
Subjt:  SVC

XP_022930265.1 uncharacterized protein LOC111436769 [Cucurbita moschata]

3.7e-76

82.18

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MDTS++AGTLS+ ANNG+GFAKFLNR DFVSN +ISATDSI DQI P SAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS
        GGE   NGF  GGGDFDGSYGGGGG  GG GWNFDRFGGSDW+ES SSSS NPAYYFVYEVV WIALSNCVHFAFKK++RFA  AI NS RGKLSMRLIS
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS

Query:  VC
        VC
Subjt:  VC

XP_023513728.1 uncharacterized protein LOC111778252 [Cucurbita pepo subsp. pepo]

7.4e-77

82.67

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MDTS++AGTLS+ ANNG+GFAKFLNRLDFVSN +IS TDSI DQI P SAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS
        GGE   NGF  GGGDFDGSYGGGGG  GG GWNFDRFGGSDWDES+SSSS NPAYYFVYEVV WIALSNCVHFAFKK++RFA  AI NS RGKLSMRLIS
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS

Query:  VC
        VC
Subjt:  VC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG90 Uncharacterized protein

5.7e-75

80.39

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MD+S++AGTLS+ ANN +GFAK LNRLDFVSN  IS TDSITDQIPPSS A +L LSAALFPVAT+APPPVKSVS RSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGG-GWNFDRFGGSDWDE-SASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRL
        G   ED+GF  GGGDFDG  GG GG  GGG GWNFDRFGG+DWDE S+SSSS NPAYYFVYEVVCWIALSNCVHFAFKK+VRFAA AIGNS RGKL+MRL
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGG-GWNFDRFGGSDWDE-SASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRL

Query:  ISVC
        ISVC
Subjt:  ISVC

A0A1S3C7S8 uncharacterized protein LOC103497828

8.8e-76

81.37

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Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MD+S++AGTLS+ ANN +GFAK LNRLDFVSN  ISATDSITDQIP SS A SL LSAALFPVAT+APPPVKSVS RSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGG-GWNFDRFGGSDWDESA-SSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRL
        G   ED+GF  GGGDFDG YGG GG  GGG GWNFDRFGG+DWDES+ SSSS NPAYYFVYEVVCWIALSNCVHFAFKK+VRFAA A GNS RGKLSMRL
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGG-GWNFDRFGGSDWDESA-SSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRL

Query:  ISVC
        ISVC
Subjt:  ISVC

A0A6J1CBL0 uncharacterized protein LOC111009719

1.1e-78

83.25

Show/hide

Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MD+S++AGTLS+AANNGLGFAKFLNRLDFVSN  +SA+DSIT+QIPPSSAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSS-YNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLI
        GG  ED+GF  GG +FDGSYGGGGG   G GWNFDRFGG+DWDES+SSSS  NPAYYFVYEVVCWIALSNCVHFAFKK+VRFAA+AIGNS RGKLSMRLI
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSS-YNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLI

Query:  SVC
        SVC
Subjt:  SVC

A0A6J1EWH7 uncharacterized protein LOC111436769

1.8e-76

82.18

Show/hide

Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MDTS++AGTLS+ ANNG+GFAKFLNR DFVSN +ISATDSI DQI P SAAG+L LSAALFPVAT+APPPVKS+SRRSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS
        GGE   NGF  GGGDFDGSYGGGGG  GG GWNFDRFGGSDW+ES SSSS NPAYYFVYEVV WIALSNCVHFAFKK++RFA  AI NS RGKLSMRLIS
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS

Query:  VC
        VC
Subjt:  VC

A0A6J1KLU0 uncharacterized protein LOC111494437

7.4e-75

81.19

Show/hide

Query:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND
        MDTS++AGTLS+ ANNG+GFAKFLNRLDFVSN +IS TDSI DQI P SAAG+L LSAALFPVAT+APPPVKS S RSASRTFLRRKRRTKRRL+SDD++
Subjt:  MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDND

Query:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS
        GGE   NGF  GGGDFDGSYGGGGG  GG GWNFDRFGGSDWDES+SSS  NPAYYFVYEVV WIALSNCVHFAFKK++RFA  A+ NS RGKLSMRLIS
Subjt:  GGEEEDNGFGGGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLIS

Query:  VC
        VC
Subjt:  VC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06780.1 glycine-rich protein

6.3e-26

43.19

Show/hide

Query:  MDTSVIAGTLSI-AANNGLGFAK-FLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDD
        M+ S+IA T+++  A  G+ F K  L RLD  ++  IS  DS+ D   P    G +  SA +FPV  +APPPV+S S ++  R  +R+KRRT+R     D
Subjt:  MDTSVIAGTLSI-AANNGLGFAK-FLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDD

Query:  NDGGEE-----EDNGFGGGGGDFDGSYGGGGGRRGGGGWNF----DRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNS
         D   +      +  FGG  G F   +GGGG   GG GWN+      FG  +WD S+ SS  +PA  FVYEV+CWIALSNCVHFAFK+IVR     + + 
Subjt:  NDGGEE-----EDNGFGGGGGDFDGSYGGGGGRRGGGGWNF----DRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNS

Query:  GRGKLSMRLISVC
         R KL++ L  VC
Subjt:  GRGKLSMRLISVC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACACATCTGTGATCGCCGGAACCCTTTCGATCGCCGCCAACAATGGCCTTGGCTTCGCCAAATTCCTCAACCGCCTCGATTTCGTATCCAATTCCTTCATCTCCGC
CACCGATTCAATCACCGATCAGATCCCGCCGTCTTCCGCCGCCGGATCTCTTCATTTGTCCGCCGCACTTTTCCCTGTCGCCACCGTCGCTCCGCCGCCTGTCAAATCGG
TTTCGCGCCGATCCGCCTCTCGGACGTTTCTCCGTAGAAAGCGCCGAACGAAGCGTAGACTGCACAGCGATGACAACGACGGCGGCGAGGAGGAGGACAACGGATTCGGC
GGTGGCGGCGGCGATTTTGACGGATCTTACGGCGGAGGCGGCGGCAGGAGAGGCGGCGGGGGTTGGAATTTCGATAGATTTGGGGGGAGTGATTGGGACGAATCGGCGTC
GTCTTCTTCTTATAATCCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTCTCGAATTGTGTTCATTTTGCGTTCAAGAAGATTGTTAGATTTGCAGCCA
ATGCAATTGGGAACTCCGGACGGGGAAAATTGTCGATGAGATTAATCTCTGTCTGCTGA

mRNA sequence

Show/hide mRNA sequence

CGTGGCGTGGCTCGTCCGCCTTCTCCTTTTCCTCTTTGATTTTTCCTTCTCTTTTCTCTTCAATTTTCCCCAATTTATTGAAACCCTAGATCGTTCATCTTCAAAATCTC
AAAATCCCAATTCCAAATCCTTCAATTTCAATGGACACATCTGTGATCGCCGGAACCCTTTCGATCGCCGCCAACAATGGCCTTGGCTTCGCCAAATTCCTCAACCGCCT
CGATTTCGTATCCAATTCCTTCATCTCCGCCACCGATTCAATCACCGATCAGATCCCGCCGTCTTCCGCCGCCGGATCTCTTCATTTGTCCGCCGCACTTTTCCCTGTCG
CCACCGTCGCTCCGCCGCCTGTCAAATCGGTTTCGCGCCGATCCGCCTCTCGGACGTTTCTCCGTAGAAAGCGCCGAACGAAGCGTAGACTGCACAGCGATGACAACGAC
GGCGGCGAGGAGGAGGACAACGGATTCGGCGGTGGCGGCGGCGATTTTGACGGATCTTACGGCGGAGGCGGCGGCAGGAGAGGCGGCGGGGGTTGGAATTTCGATAGATT
TGGGGGGAGTGATTGGGACGAATCGGCGTCGTCTTCTTCTTATAATCCAGCGTATTATTTCGTTTACGAGGTGGTTTGTTGGATCGCGCTCTCGAATTGTGTTCATTTTG
CGTTCAAGAAGATTGTTAGATTTGCAGCCAATGCAATTGGGAACTCCGGACGGGGAAAATTGTCGATGAGATTAATCTCTGTCTGCTGATCGGTACATTTCTCTTCTCAA
TGACCAATCTCTGGAATGGAAATCTGGCTATAAATATCTCGTATTCAATTGACAATTGCTTTGTATATTTTGTAAATATTCACAATCACATTGATTTATCTTAGTAAATT
GGTCCGAAATTACACATGGAAATCTTTTCCTTTGAAATCTGATAGCTTGTTTAAGAGTTTAGGCATTTTGTTTACCTCTCTCTGCCTGGTTCTTATTATTCTTATTTGCT
TATGCTAGGGGAATGCTCTAATTTAGGTCCCGTTTGATAATCATTTTTTTTTTGTTTTTGAAATTTAAGCATATAATATAGTTCCCGT

Protein sequence

Show/hide protein sequence

MDTSVIAGTLSIAANNGLGFAKFLNRLDFVSNSFISATDSITDQIPPSSAAGSLHLSAALFPVATVAPPPVKSVSRRSASRTFLRRKRRTKRRLHSDDNDGGEEEDNGFG
GGGGDFDGSYGGGGGRRGGGGWNFDRFGGSDWDESASSSSYNPAYYFVYEVVCWIALSNCVHFAFKKIVRFAANAIGNSGRGKLSMRLISVC

Sed0011406 (gene) of Chayote v1 genome