; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011419 (gene) of Chayote v1 genome

Gene IDSed0011419
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:40171355..40174188
RNA-Seq ExpressionSed0011419
SyntenySed0011419
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023515527.1 serine/arginine-rich SC35-like splicing factor SCL30 isoform X1 [Cucurbita pepo subsp. pepo]4.0e-0655.22Show/hide
Query:  LEASGPTLLLGEGKATIPFPLVDVMQTT-DDQGVLLVSEMARGLGNLILRAVIMMMVVIVREMDIMS
        ++  G TLLL +G+ATI FP + VMQ T D Q VLLVSEM RG+   IL+ +IM++V I  EMDIM+
Subjt:  LEASGPTLLLGEGKATIPFPLVDVMQTT-DDQGVLLVSEMARGLGNLILRAVIMMMVVIVREMDIMS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGCGCAAGTTTGCAGCATTTTTTTATCAGATTGTTCTTAGAGATGAAGATGATTCATGGCAGTGGTCTTTAGAAGCATCGGGTCCTACTCTCCTGCTCGGAGA
GGGCAAGGCGACCATTCCGTTTCCCCTAGTAGACGTCATGCAGACTACAGATGACCAAGGGGTGCTCCTCGTGAGCGAGATGGCGAGAGGACTCGGCAACTTAATTCTTC
GAGCTGTGATAATGATGATGGTCGTGATCGTGAGGGAAATGGATATCATGAGTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGAGCGCAAGTTTGCAGCATTTTTTTATCAGATTGTTCTTAGAGATGAAGATGATTCATGGCAGTGGTCTTTAGAAGCATCGGGTCCTACTCTCCTGCTCGGAGA
GGGCAAGGCGACCATTCCGTTTCCCCTAGTAGACGTCATGCAGACTACAGATGACCAAGGGGTGCTCCTCGTGAGCGAGATGGCGAGAGGACTCGGCAACTTAATTCTTC
GAGCTGTGATAATGATGATGGTCGTGATCGTGAGGGAAATGGATATCATGAGTAAGTAG
Protein sequenceShow/hide protein sequence
MNERKFAAFFYQIVLRDEDDSWQWSLEASGPTLLLGEGKATIPFPLVDVMQTTDDQGVLLVSEMARGLGNLILRAVIMMMVVIVREMDIMSK