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Sed0011431 (gene) of Chayote v1 genome

Gene IDSed0011431
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationLG08:1222782..1223361
RNA-Seq ExpressionSed0011431
SyntenySed0011431
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3076.09Show/hide
Query:  LFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        + + KAL+FA +LAG SL +QP+TASGL++IDLALKWVA K+PI NTH  DSVKKL MK M+LAPSPAM+FDPNQSNKRGVKKGSDPIHNRS
Subjt:  LFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2875Show/hide
Query:  MGFLFNKKALIFAFVLAGFSL-FLQPETASGLSSIDLALKWVALKTPIINTHKA-DSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFLF +K L F F+LAGF    LQP+TASGL++ID+ALKWVA K+P I+THKA DS KKL MK MN+APSPAMNFDPNQSNKR VKKGSDPIHNR
Subjt:  MGFLFNKKALIFAFVLAGFSL-FLQPETASGLSSIDLALKWVALKTPIINTHKA-DSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]1.3e-2068.32Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFL---QPE-TASGLSSIDLALKWVALK-TPIINTHKADSVKKLTMKKMNL-APSPAMNFDPNQSNKRGVKKGSDPIHNR
        MG LF++K L F FV+A F L +   QP+ TA+GLS+ID ALKWVA K T  INTHKADS  +   K +NL APSPAMNFDPNQSNKRGVKKGSDPIHNR
Subjt:  MGFLFNKKALIFAFVLAGFSLFL---QPE-TASGLSSIDLALKWVALK-TPIINTHKADSVKKLTMKKMNL-APSPAMNFDPNQSNKRGVKKGSDPIHNR

Query:  S
        S
Subjt:  S

ONI08679.1 hypothetical protein PRUPE_5G193600 [Prunus persica]8.7e-1254.55Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKW-----VALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  + A++  FV  GF L LQPE  SGL S+DLAL+W       LK+  ++  KA +V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKW-----VALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

PQQ10203.1 hypothetical protein Pyn_16404 [Prunus yedoensis var. nudiflora]5.1e-1252.58Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINT-HKADSVKKLTMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  + A++  FV  GF L LQPE  SGL S+DLAL+W       + + H  ++V    ++ K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINT-HKADSVKKLTMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein6.5e-2168.32Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFL---QPE-TASGLSSIDLALKWVALK-TPIINTHKADSVKKLTMKKMNL-APSPAMNFDPNQSNKRGVKKGSDPIHNR
        MG LF++K L F FV+A F L +   QP+ TA+GLS+ID ALKWVA K T  INTHKADS  +   K +NL APSPAMNFDPNQSNKRGVKKGSDPIHNR
Subjt:  MGFLFNKKALIFAFVLAGFSLFL---QPE-TASGLSSIDLALKWVALK-TPIINTHKADSVKKLTMKKMNL-APSPAMNFDPNQSNKRGVKKGSDPIHNR

Query:  S
        S
Subjt:  S

A0A314XM06 Uncharacterized protein4.2e-1254.55Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKW-----VALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  + A++  FV  GF L LQPE  SGL S+DLAL+W       LK+  ++  KA +V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKW-----VALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein2.5e-1252.58Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINT-HKADSVKKLTMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  + A++  FV  GF L LQPE  SGL S+DLAL+W       + + H  ++V    ++ K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINT-HKADSVKKLTMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

A0A498JR50 Uncharacterized protein9.4e-1254.08Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPI---INTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  ++AL+   V  GF L LQPE  SGL S DLAL+W     P    ++  KA +V+ L   KM+LAP+P+M FD NQSNKR V++GSDPIHNRS
Subjt:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPI---INTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

M5WYZ5 Uncharacterized protein4.2e-1254.55Show/hide
Query:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKW-----VALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  + A++  FV  GF L LQPE  SGL S+DLAL+W       LK+  ++  KA +V+ L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKW-----VALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTTGTTCAACAAAAAAGCTTTGATCTTTGCCTTTGTTCTTGCTGGTTTTTCTCTGTTTCTTCAACCTGAAACAGCATCTGGGCTAAGCTCCATTGATCTTGC
TCTCAAATGGGTAGCCTTAAAAACCCCAATTATCAACACCCACAAGGCTGATTCTGTGAAAAAGTTGACTATGAAGAAGATGAACTTGGCTCCTTCACCCGCCATGAATT
TCGACCCGAACCAATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATAAACCCCAATGGCTTAAACTGTCACAATAATTTGCCATAACAAGATAAGTTGAGTTCCTGTCTCACACACACTTCAAATTAAACTCTCCCCATTATTCCTTCTTCATT
TTTCTCTTCATATTCTTGAATACAAACCAAATGGGTTTCTTGTTCAACAAAAAAGCTTTGATCTTTGCCTTTGTTCTTGCTGGTTTTTCTCTGTTTCTTCAACCTGAAAC
AGCATCTGGGCTAAGCTCCATTGATCTTGCTCTCAAATGGGTAGCCTTAAAAACCCCAATTATCAACACCCACAAGGCTGATTCTGTGAAAAAGTTGACTATGAAGAAGA
TGAACTTGGCTCCTTCACCCGCCATGAATTTCGACCCGAACCAATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGGTCTTAGCATGGAGGAGGA
GGCTGAATTTGAATTGATTTGTTTTTTTTTTTTTCTCAGAATGATGTGAAAGGGGTTGGTTGAATTTCCATACTATATGTATAATTTTCTTTCTCTTTGGTTTGCTTAAA
TGAAATAGTTCAAAAGGTTATTGTATAGTT
Protein sequenceShow/hide protein sequence
MGFLFNKKALIFAFVLAGFSLFLQPETASGLSSIDLALKWVALKTPIINTHKADSVKKLTMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS