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Sed0011432 (gene) of Chayote v1 genome

Gene IDSed0011432
OrganismSechium edule (Chayote v1)
DescriptionNucleic acid-binding
Genome locationLG14:24806432..24809717
RNA-Seq ExpressionSed0011432
SyntenySed0011432
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134518.1 uncharacterized protein LOC101221511 [Cucumis sativus]2.1e-3680Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+V+P YDKK+AAKLAAQEAALAAPKLPVRSSP     STMDVA  STS+   AAMDV++DD S+S +LKPVGG+GKKSK+K
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_008439430.1 PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo]5.0e-3882.5Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+V+P YDKK+AAKLAAQEAALAAPKLPVRSSPF    STMDVA ASTS+   AAMDV+MDD S+S  LKPVGG+GKKSK+K
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_022146541.1 uncharacterized protein LOC111015735 [Momordica charantia]4.2e-3781.15Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTSTA-----AMDVEMDDGSQSMMLKPVGGIGKKSK
        MAKSMRSKREKRLRAIRRE+VEP YD KDAAKLAAQ+AALAAPKLPVR SPF   AST DVA ASTST      AMDVE+DD SQSM +KPVGGIGKKS 
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTSTA-----AMDVEMDDGSQSMMLKPVGGIGKKSK

Query:  KKFKVGKAKRRGKCKIKRNRHI
        +KFKVGKAKRRGKC+IKRNRHI
Subjt:  KKFKVGKAKRRGKCKIKRNRHI
XP_022926965.1 uncharacterized protein LOC111433923 [Cucurbita moschata]9.0e-4088.33Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFA--STMDVATASTST---AAMDVEMDDGSQSMM-LKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+VEPIYDKKDAAKLAAQ+AALAAPKLPVR SPF   STMDVA ASTST   AAM+VEMDDGS+SMM LK VGGIGKKSKKK
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFA--STMDVATASTST---AAMDVEMDDGSQSMM-LKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
XP_038877484.1 uncharacterized protein LOC120069761 [Benincasa hispida]4.5e-3985.83Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+V+P YDKKDAAKLAAQEAALAAPKLPVRSSPF    STMDVA ASTST    AMDVEMDD S+S  LKPVGGIGKKSK+K
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
TrEMBL top hitse value%identityAlignment
A0A1S3AZE5 uncharacterized protein LOC1034842412.4e-3882.5Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+V+P YDKK+AAKLAAQEAALAAPKLPVRSSPF    STMDVA ASTS+   AAMDV+MDD S+S  LKPVGG+GKKSK+K
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A5A7UG11 Uncharacterized protein2.4e-3882.5Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+V+P YDKK+AAKLAAQEAALAAPKLPVRSSPF    STMDVA ASTS+   AAMDV+MDD S+S  LKPVGG+GKKSK+K
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTST---AAMDVEMDDGSQSMMLKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCK+KRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A6J1CZN9 uncharacterized protein LOC1110157352.0e-3781.15Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTSTA-----AMDVEMDDGSQSMMLKPVGGIGKKSK
        MAKSMRSKREKRLRAIRRE+VEP YD KDAAKLAAQ+AALAAPKLPVR SPF   AST DVA ASTST      AMDVE+DD SQSM +KPVGGIGKKS 
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPF---ASTMDVATASTSTA-----AMDVEMDDGSQSMMLKPVGGIGKKSK

Query:  KKFKVGKAKRRGKCKIKRNRHI
        +KFKVGKAKRRGKC+IKRNRHI
Subjt:  KKFKVGKAKRRGKCKIKRNRHI
A0A6J1EMJ6 uncharacterized protein LOC1114339234.4e-4088.33Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFA--STMDVATASTST---AAMDVEMDDGSQSMM-LKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+VEPIYDKKDAAKLAAQ+AALAAPKLPVR SPF   STMDVA ASTST   AAM+VEMDDGS+SMM LK VGGIGKKSKKK
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFA--STMDVATASTST---AAMDVEMDDGSQSMM-LKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
A0A6J1KND1 uncharacterized protein LOC1114972204.4e-4088.33Show/hide
Query:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFA--STMDVATASTST---AAMDVEMDDGSQSMM-LKPVGGIGKKSKKK
        MAKSMRSKREKRLRAIRRE+VEPIYDKKDAAKLAAQ+AALAAPKLPVR SPF   STMDVA ASTST   AAM+VEMDDGS+SMM LK VGGIGKKSKKK
Subjt:  MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFA--STMDVATASTST---AAMDVEMDDGSQSMM-LKPVGGIGKKSKKK

Query:  FKVGKAKRRGKCKIKRNRHI
        FKVGKAKRRGKCKIKRNRHI
Subjt:  FKVGKAKRRGKCKIKRNRHI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30880.1 unknown protein4.4e-1652.85Show/hide
Query:  MAKSMRSKREKRLRAIRREIV--EPIYDKKDAAKLAAQEAALAAPKLPVRSSPFASTMDVATASTSTAA--------MDVEMDDGSQSMMLKPVGGIGKK
        MAKSMR KR KRLRAIRREIV  E     ++ AK AA EAALAAPKLPVR +P +  M+VAT S+ +A+         D EMDD  ++  LKP   IGKK
Subjt:  MAKSMRSKREKRLRAIRREIV--EPIYDKKDAAKLAAQEAALAAPKLPVRSSPFASTMDVATASTSTAA--------MDVEMDDGSQSMMLKPVGGIGKK

Query:  SKKKFKVGKAKRRGKCKIKRNRH
         KKKFK+G   RR K  ++  R+
Subjt:  SKKKFKVGKAKRRGKCKIKRNRH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCCATGAGATCGAAGAGAGAGAAAAGGCTGAGAGCCATCAGGAGAGAGATCGTTGAGCCTATCTACGACAAGAAAGACGCTGCCAAGCTCGCTGCCCAAGA
GGCTGCTCTTGCTGCCCCTAAGCTGCCCGTGCGATCCTCTCCTTTCGCCTCCACTATGGACGTCGCCACAGCCTCCACTTCCACCGCCGCTATGGATGTGGAGATGGATG
ATGGCAGTCAAAGCATGATGCTGAAGCCTGTAGGTGGAATTGGGAAGAAATCCAAAAAGAAATTCAAGGTTGGTAAGGCCAAGCGCCGAGGTAAGTGCAAGATCAAAAGG
AACCGCCACATTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGGGAGGTCTTATAAAAACCCTAAATCGGTGGGAGCCCTAATCCTGGTGGGCAAGCGCAATCAAAGCAAGCAGAGAAGAGAGTGAGAGCGGTGGTCGGAGAGAAGAA
GAATGGCGAAATCCATGAGATCGAAGAGAGAGAAAAGGCTGAGAGCCATCAGGAGAGAGATCGTTGAGCCTATCTACGACAAGAAAGACGCTGCCAAGCTCGCTGCCCAA
GAGGCTGCTCTTGCTGCCCCTAAGCTGCCCGTGCGATCCTCTCCTTTCGCCTCCACTATGGACGTCGCCACAGCCTCCACTTCCACCGCCGCTATGGATGTGGAGATGGA
TGATGGCAGTCAAAGCATGATGCTGAAGCCTGTAGGTGGAATTGGGAAGAAATCCAAAAAGAAATTCAAGGTTGGTAAGGCCAAGCGCCGAGGTAAGTGCAAGATCAAAA
GGAACCGCCACATTTAATTCCCAACCACGGATAGATTTGTTTGGAACTAGTTATTCCTATCGCCAGTATAGTTATATATACAATCTTTTGGAGTAGTTACTATATTGTAT
TATTTTAGTGTCATTTGGTCGCATTTGAAATTTTGGAGTAGGCTAAGTCTGAAGATATATCTTGTTTGACTCAAAGGTAATTGGACTTGTTTAACTCGTCTTTTCGTGGC
TTCAACTTCAAGCTGTAATGGTTTTGTTTTGCTATTATATGGTTTAAAGTTCTAGATAGAGGCTGGCCCAATGTTTATATCTATGGGTGCGTGTGTGTTTGGTACACTGA
TAATCATTCATCCCATGATCACTACTTATTCGGCTCCGCAGTCCCTTTTCATTCTTCTATACCAATATTTTGTTCTTTATGATCATTTTTTTCATCCTAGAGTAGATAAC
ATTTC
Protein sequenceShow/hide protein sequence
MAKSMRSKREKRLRAIRREIVEPIYDKKDAAKLAAQEAALAAPKLPVRSSPFASTMDVATASTSTAAMDVEMDDGSQSMMLKPVGGIGKKSKKKFKVGKAKRRGKCKIKR
NRHI