; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011436 (gene) of Chayote v1 genome

Gene IDSed0011436
OrganismSechium edule (Chayote v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationLG05:45697786..45700202
RNA-Seq ExpressionSed0011436
SyntenySed0011436
Gene Ontology termsGO:0016197 - endosomal transport (biological process)
GO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]3.8e-6585.16Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        M S  GQSRP  P   NRGK QS TERL+ADVGGLE SLLQMV+DH Y S KLR+N+EKAKKDAIQKAVRVSDLLVD VNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A+TI+RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]4.3e-6988.39Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MNSPSGQSR + PA RNRGK QS  ERL+ADVGGLEASL QMVNDH Y S KLR+N+EKAKKDAIQKAVRVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ++TI+RFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023007259.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima]3.9e-7089.03Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MNSPSGQSR + PAARNRGK QS  ERL+ADVGGLEASL QMVNDH Y S KLR+N+EKAKKDAIQKA+RVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ++TI+RFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]2.2e-6887.74Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MNSPSGQSR + PA RNRGK QS  ERL+ADVGGLE SL QMVNDH Y S KLR+N+EKAKKDAIQKAVRVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ++TI+RFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]6.9e-6787.1Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MNS SG SRP  P A NRGK QS TE L A+VGGLEASLLQMVNDHHY S KLR+N+EKAKKDAIQKAVRVSDLL DAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A+TI+RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A067LMV0 Biogenesis of lysosome-related organelles complex 1 subunit 11.3e-5071.03Show/hide
Query:  PYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMK
        P  P AR R       ++  A+ GGLEASLLQ++ DHH TS +LRD  EKAKKDAI+ AVRVSDLL+DAVNGGVQ SF+N+K IELEIRALA TISRFM+
Subjt:  PYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMK

Query:  QTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ
        QTDQWLAATHA+NTA+KEIGDFENW+KT++FDCKSI+TAI NI+Q
Subjt:  QTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ

A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 11.8e-6585.16Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        M S  GQSRP  P   NRGK QS TERL+ADVGGLE SLLQMV+DH Y S KLR+N+EKAKKDAIQKAVRVSDLLVD VNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A+TI+RF KQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 17.0e-6582.58Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        M+SPSG SRP+ P ARNRG +QS TERL+++ GGLEASLLQMV+DH + S KLR ++EKAKKDAIQKAVRVSDLLV AVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A+TISRFMKQTDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 12.1e-6988.39Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MNSPSGQSR + PA RNRGK QS  ERL+ADVGGLEASL QMVNDH Y S KLR+N+EKAKKDAIQKAVRVSDLLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ++TI+RFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 11.9e-7089.03Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MNSPSGQSR + PAARNRGK QS  ERL+ADVGGLEASL QMVNDH Y S KLR+N+EKAKKDAIQKA+RVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ++TI+RFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 11.4e-3854.19Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MN+P   S     AAR R       E+   +   LE+SLLQ+++D+  +S +LR+  E+++K+AI+ A R +DLLV AVNGGV+  FVN+K IE EIR L
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A T+++F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 11.1e-1734.48Show/hide
Query:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H    N+ ++  EK +++AI  A  +++ LVD +N GV  +++NQ+ ++ E++ L    ++F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 13.6e-1836.21Show/hide
Query:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + ++  EK +KDAI  A  +++ LVD +N GV  ++VNQ+ ++ E++ L +  ++F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D + I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 11.1e-1734.48Show/hide
Query:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H    N+ ++  EK +++AI  A  +++ LVD +N GV  +++NQ+ ++ E++ L    ++F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q54VX7 Biogenesis of lysosome-related organelles complex 1 subunit 12.8e-1841.74Show/hide
Query:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L ++V DH    NKL++  E  KK+AI     V++ L+D+VN GV   F NQK +E E R L +  ++F KQT+QW+      N ++KEIGD ENW K I
Subjt:  LLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIY
        + D  +I+  I  +Y
Subjt:  DFDCKSITTAIHNIY

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein1.0e-3954.19Show/hide
Query:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL
        MN+P   S     AAR R       E+   +   LE+SLLQ+++D+  +S +LR+  E+++K+AI+ A R +DLLV AVNGGV+  FVN+K IE EIR L
Subjt:  MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRAL

Query:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A T+++F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  ASTISRFMKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTCCGTCAGGGCAATCAAGGCCGTACTTCCCGGCAGCGCGTAATCGCGGCAAGATTCAATCGGGAACGGAGAGATTGAACGCCGACGTTGGAGGATTGGAAGC
TTCTTTGCTCCAAATGGTCAATGATCACCACTATACATCCAACAAGCTCCGAGACAACGCCGAGAAGGCGAAGAAAGATGCTATCCAGAAAGCGGTGCGCGTTTCGGATC
TGTTAGTGGACGCTGTGAATGGCGGAGTTCAGGGATCTTTTGTCAATCAGAAATTGATTGAGCTTGAAATTAGGGCTTTGGCGTCTACGATTTCCCGATTTATGAAGCAG
ACCGATCAGTGGCTCGCCGCCACTCACGCTCTCAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAATTGGATAAAGACCATCGATTTTGACTGTAAAAGCATAACTAC
GGCCATCCATAACATTTATCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCTTGATTCTGTCATACAGCAGAAGGACAAGGAGGAAGAATCGAATCAAAGATAACCATCTCAATATCGTGAATCCAGAATCTTCCGCCGGCGAACATGAATTCTCC
GTCAGGGCAATCAAGGCCGTACTTCCCGGCAGCGCGTAATCGCGGCAAGATTCAATCGGGAACGGAGAGATTGAACGCCGACGTTGGAGGATTGGAAGCTTCTTTGCTCC
AAATGGTCAATGATCACCACTATACATCCAACAAGCTCCGAGACAACGCCGAGAAGGCGAAGAAAGATGCTATCCAGAAAGCGGTGCGCGTTTCGGATCTGTTAGTGGAC
GCTGTGAATGGCGGAGTTCAGGGATCTTTTGTCAATCAGAAATTGATTGAGCTTGAAATTAGGGCTTTGGCGTCTACGATTTCCCGATTTATGAAGCAGACCGATCAGTG
GCTCGCCGCCACTCACGCTCTCAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAATTGGATAAAGACCATCGATTTTGACTGTAAAAGCATAACTACGGCCATCCATA
ACATTTATCAAGACTGAAATGCTTGTAGATAAAGAGTCAACTGCCCTTGCTCTCACAAAGCTTATTCTGTAGAGTTGAAAATCACAGACTCCAGTCCTCTGTTTTAAGTA
CGCTGAATCTGTCTCCATAAACATGGCTGGAGGAGCTATTTTGGTATAAGGATATAGAGGTGCAGCATATGCAGATGGGAACTTTTATAGACCTTGAGAACGAACTTATT
CAACTGTCATGTCTGTTTCCTTTCTAACTGTATAATATAATTTGTCGACTCTACATTTTGAGTTTACTGATTTATTTCTCGTTAACACGGTGCATGGTATCATTTGTCCA
TGTATTGTTATTGGTAATGTAAACTGCAGTCTTCTTCTCTCTACAATTCTTAGCTACTGCCATTTAATAATAACTTCTACATTCTTTCAA
Protein sequenceShow/hide protein sequence
MNSPSGQSRPYFPAARNRGKIQSGTERLNADVGGLEASLLQMVNDHHYTSNKLRDNAEKAKKDAIQKAVRVSDLLVDAVNGGVQGSFVNQKLIELEIRALASTISRFMKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD