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Sed0011440 (gene) of Chayote v1 genome

Gene IDSed0011440
OrganismSechium edule (Chayote v1)
DescriptionChromosome transmission fidelity protein
Genome locationLG05:41360470..41360870
RNA-Seq ExpressionSed0011440
SyntenySed0011440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448201.1 PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo]2.7e-3192.65Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MV FCF+VDQ+R+VRRSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022140680.1 uncharacterized protein LOC111011282 [Momordica charantia]5.4e-3292.65Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVD++RRVRRSRPAPG+CSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022944461.1 uncharacterized protein LOC111448908 [Cucurbita moschata]4.9e-3395.59Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ+RR+RRSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_022986417.1 uncharacterized protein LOC111484159 [Cucurbita maxima]1.4e-3294.12Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ+RR++RSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

XP_038902212.1 uncharacterized protein LOC120088840 [Benincasa hispida]1.4e-3294.12Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCF+VDQ+R+VRRSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

TrEMBL top hitse value%identityAlignment
A0A1S3BJR8 uncharacterized protein LOC1034904651.3e-3192.65Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MV FCF+VDQ+R+VRRSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1CFS7 uncharacterized protein LOC1110112822.6e-3292.65Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVD++RRVRRSRPAPG+CSRCGGGA VADMKTATRFCHVPFYWKSWRA+ICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1FUH3 uncharacterized protein LOC1114489082.4e-3395.59Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ+RR+RRSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6J1J7G8 uncharacterized protein LOC1114841596.9e-3394.12Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ+RR++RSRPAPG+CSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

A0A6P6S4N3 uncharacterized protein LOC1136877971.4e-3086.76Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ R+VRRS+PA G+CSRCGGGASVADMKTATRFCHVPFYWK+WRA+ICTFCG++LRSYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein1.0e-2873.53Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ R+V+RS+PA G CSRCG  AS+ADMKT+TRFC +P YW+SWRA++C+FCGSVL+SYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

AT2G20835.1 unknown protein2.6e-2467.16Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSY
        M  FCFLVDQ+++VR  +PA GLCSRCGGGA VADM+T+TRFC VPFY K+W+A++C  CG+VL+SY
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSY

AT3G15534.1 unknown protein4.3e-2772.06Show/hide
Query:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR
        MVCFCFLVDQ+R+V+ S+PA G CSRCG GA VADMKT+TRFC +P Y +SWRA++C+FCGSVL+SYR
Subjt:  MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR

AT4G29905.1 unknown protein2.3e-0430.51Show/hide
Query:  VCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC
        +C   +  +++     + APG+C  CGG  S  D++T   FC +P  +K  R   C+ C
Subjt:  VCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGCTTTTGCTTTCTGGTGGATCAGCAGCGGAGGGTGCGGCGGAGCAGGCCGGCGCCGGGGCTTTGCTCCCGCTGCGGCGGCGGAGCCAGTGTCGCCGATATGAA
AACCGCCACCAGATTCTGCCACGTCCCCTTTTACTGGAAATCCTGGAGGGCACTCATTTGTACCTTTTGTGGATCTGTTCTTCGATCCTATCGCTAA
mRNA sequenceShow/hide mRNA sequence
AATTAGTTGAGTTCGGCAAATAATTCCGAATTCCAACCAACAAAACGGCCATGGTTTGCTTTTGCTTTCTGGTGGATCAGCAGCGGAGGGTGCGGCGGAGCAGGCCGGCG
CCGGGGCTTTGCTCCCGCTGCGGCGGCGGAGCCAGTGTCGCCGATATGAAAACCGCCACCAGATTCTGCCACGTCCCCTTTTACTGGAAATCCTGGAGGGCACTCATTTG
TACCTTTTGTGGATCTGTTCTTCGATCCTATCGCTAATTCCTTTTTTTTCTTTTTCTTTTTTTCCCTTCACAATATGTATATTTATTTCATTTCTTCCCATTAATTTGTT
CTCCATTCAATTTTGGTTCTTTGTTGTTTCTTTCTGTTTAACATGTCTCTGATTTCTTCAAGCACAACCGC
Protein sequenceShow/hide protein sequence
MVCFCFLVDQQRRVRRSRPAPGLCSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR