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Sed0011444 (gene) of Chayote v1 genome

Gene IDSed0011444
OrganismSechium edule (Chayote v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationLG09:24937214..24939798
RNA-Seq ExpressionSed0011444
SyntenySed0011444
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]6.3e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

TYJ98376.1 uncharacterized protein E5676_scaffold232G001130 [Cucumis melo var. makuwa]6.3e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]6.3e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]5.7e-3948.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYG--QSSHPFHILEDKDVDWYLTLVKENSPRHPLVA-
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+FG+LIL+E++ DA  SS+ LSILLDYG         I EDKDV W+L+LVK    RHPLVA 
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYG--QSSHPFHILEDKDVDWYLTLVKENSPRHPLVA-

Query:  ---DIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
            + +  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  ---DIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]3.7e-3851.34Show/hide
Query:  LPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQS--SHPFHILEDKDVDWYLTLVKENSPRHPLVADIKD
        +PIVVFH G WNE   Y NYKT+GVLVD++M FEDF  LI+KE++LDA  SS+ LS LLD+G +   +   I EDKDV W+LTLVKE S RHPLVA +  
Subjt:  LPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQS--SHPFHILEDKDVDWYLTLVKENSPRHPLVADIKD

Query:  FRLERTSNSVVSNT----NLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          LE +S+ V S      +++ YS  + +D+    F VI DI        KDVFASKE+L  CF Y+AVK NF++KT RS+++++EF
Subjt:  FRLERTSNSVVSNT----NLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like3.1e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

A0A5D3BH55 DBD_Tnp_Mut domain-containing protein3.1e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

A0A5D3C8T8 SWIM-type domain-containing protein3.1e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like3.1e-3848.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+F +LIL+E+  DA  SS+ LSILLDYG ++      I EDKDV W+L+LVK    RHPLV  
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYGQSS--HPFHILEDKDVDWYLTLVKENSPRHPLV--

Query:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
          A + D  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  --ADIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

A0A5D3DJR8 MuDR family transposase2.8e-3948.96Show/hide
Query:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYG--QSSHPFHILEDKDVDWYLTLVKENSPRHPLVA-
        M+KLPIVVFH GQW+++ SY NYKT+GVLVDE+M+FE+FG+LIL+E++ DA  SS+ LSILLDYG         I EDKDV W+L+LVK    RHPLVA 
Subjt:  MVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKELKLDAPRSSLCLSILLDYG--QSSHPFHILEDKDVDWYLTLVKENSPRHPLVA-

Query:  ---DIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF
            + +  LE +S  +S + N   L+ SS++D+D  + T   +  +        KD+FASKE+L   F Y+A+K+NF++KT RS++K++EF
Subjt:  ---DIKDFRLERTS--NSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVLCNCFKYMAVKSNFDYKTPRSSNKAVEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAAAGTTTAATTTATTAAATTTACTAATTAATATATTAGATATATTAATATTAATGATAAATAAAACAATTTTTAAAATTTTTGAAAATCAAATGAGAAAAAT
GCATAACTTTGATTTGTCGCACAGGAAAATTCTAAGTTGGAACAACCATTCCTCTACTATAAATAGGAGATTTGACAATATGGTTAAGCTACCAATAGTTGTCTTTCATT
GTGGTCAATGGAATGAATCTGGTTCTTATGAGAATTACAAGACTAGTGGGGTTTTGGTTGATGAAGTAATGAATTTTGAGGATTTTGGGACGTTGATTCTTAAAGAGTTG
AAATTAGATGCACCTAGATCTTCTTTATGCTTATCTATCTTATTGGATTATGGTCAAAGTTCTCATCCTTTTCATATTTTGGAGGATAAGGATGTAGATTGGTACCTAAC
TTTAGTAAAGGAGAATAGCCCAAGACATCCATTAGTGGCTGATATTAAGGATTTTCGTTTAGAGAGGACATCTAATAGTGTTGTTAGCAATACAAATTTGTTGGTGTATT
CCTCAACAGTAGATGAAGATAATGATGTTACTACTTTCAATGTCATTAAAGATATTCAATTTGATTGTGTTTTCAACATAAAGGATGTATTTGCTAGTAAGGAAGTGTTG
TGTAATTGTTTCAAATACATGGCTGTGAAAAGTAATTTTGACTATAAGACTCCTAGATCTAGCAATAAAGCAGTTGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAAAGTTTAATTTATTAAATTTACTAATTAATATATTAGATATATTAATATTAATGATAAATAAAACAATTTTTAAAATTTTTGAAAATCAAATGAGAAAAAT
GCATAACTTTGATTTGTCGCACAGGAAAATTCTAAGTTGGAACAACCATTCCTCTACTATAAATAGGAGATTTGACAATATGGTTAAGCTACCAATAGTTGTCTTTCATT
GTGGTCAATGGAATGAATCTGGTTCTTATGAGAATTACAAGACTAGTGGGGTTTTGGTTGATGAAGTAATGAATTTTGAGGATTTTGGGACGTTGATTCTTAAAGAGTTG
AAATTAGATGCACCTAGATCTTCTTTATGCTTATCTATCTTATTGGATTATGGTCAAAGTTCTCATCCTTTTCATATTTTGGAGGATAAGGATGTAGATTGGTACCTAAC
TTTAGTAAAGGAGAATAGCCCAAGACATCCATTAGTGGCTGATATTAAGGATTTTCGTTTAGAGAGGACATCTAATAGTGTTGTTAGCAATACAAATTTGTTGGTGTATT
CCTCAACAGTAGATGAAGATAATGATGTTACTACTTTCAATGTCATTAAAGATATTCAATTTGATTGTGTTTTCAACATAAAGGATGTATTTGCTAGTAAGGAAGTGTTG
TGTAATTGTTTCAAATACATGGCTGTGAAAAGTAATTTTGACTATAAGACTCCTAGATCTAGCAATAAAGCAGTTGAGTTTTAG
Protein sequenceShow/hide protein sequence
MSIKFNLLNLLINILDILILMINKTIFKIFENQMRKMHNFDLSHRKILSWNNHSSTINRRFDNMVKLPIVVFHCGQWNESGSYENYKTSGVLVDEVMNFEDFGTLILKEL
KLDAPRSSLCLSILLDYGQSSHPFHILEDKDVDWYLTLVKENSPRHPLVADIKDFRLERTSNSVVSNTNLLVYSSTVDEDNDVTTFNVIKDIQFDCVFNIKDVFASKEVL
CNCFKYMAVKSNFDYKTPRSSNKAVEF